Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for slc23a1

Gene Name Gene ID Reads Annotation
slc23a1 ENSDARG00000015033 40 solute carrier family 23 (ascorbic acid transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-080804-2]










Genes with expression patterns similar to slc23a1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. slc23a1 ENSDARG00000015033 40 8 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 1.000 solute carrier family 23 (ascorbic acid transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-080804-2]
2. CU184832.2 CU184832.2 35 1.746 - - - - - - 0.753 - 0.993
3. TESK1_1 TESK1_1 276 1.745 - 0.774 - - - - - - 0.971
4. GLIPR1 GLIPR1 37 1.727 - - - - - - 0.753 - 0.974
5. RSPH1 289 1.704 - - - - - - 0.843 - 0.861 radial spoke head 1 homolog (Chlamydomonas), transcript variant X2
6. chd 56 1.689 - - - - - - 0.806 - 0.883 chordin
7. pabpn1l ENSDARG00000087996, ENSDARG00000113382 40 1.687 - - - - - - 0.719 - 0.968 poly(A) binding protein, nuclear 1-like (cytoplasmic) [Source:ZFIN;Acc:ZDB-GENE-080709-5]
8. ca9 ENSDARG00000102300 193 1.665 0.741 - - - - - 0.924 - - carbonic anhydrase IX [Source:ZFIN;Acc:ZDB-GENE-080818-5]
9. GPR180 73 1.651 - - - - - - 0.711 - 0.940 G protein-coupled receptor 180, transcript variant X2
10. TMEM98 ENSDARG00000059743 214 1.64 0.749 - - - - - 0.891 - - transmembrane protein 98 [Source:ZFIN;Acc:ZDB-GENE-070112-1092]
11. AK9 ENSDARG00000021913 53 1.632 - - - - - - 0.831 - 0.801 adenylate kinase 9 [Source:ZFIN;Acc:ZDB-GENE-041014-337]
12. ppil6 ENSDARG00000042157 45 1.613 - - - - - - 0.823 - 0.790 peptidylprolyl isomerase (cyclophilin)-like 6 [Source:ZFIN;Acc:ZDB-GENE-050522-70]
13. mctp2a ENSDARG00000001414 307 1.597 0.705 0.892 - - - - - - - multiple C2 domains, transmembrane 2a [Source:ZFIN;Acc:ZDB-GENE-040724-63]
14. kcng4 kcng4 37 1.587 - 0.701 - - - - - - 0.886
15. ttc38 ENSDARG00000042188, ENSDARG00000113493 307 1.562 0.723 - - - - - 0.839 - - tetratricopeptide repeat domain 38 [Source:ZFIN;Acc:ZDB-GENE-050522-318]
16. FP236789.1 ENSDARG00000105406 57 1.556 - - - - - - 0.809 - 0.747
17. nrgna ENSDARG00000039626 50 1.497 - 0.701 - 0.796 - - - - - neurogranin (protein kinase C substrate, RC3) a [Source:ZFIN;Acc:ZDB-GENE-090710-4]
18. mirlet7a-6 15 1.449 0.749 - - - - - 0.700 - - microRNA let7a-6
19. cox6a2 ENSDARG00000054588, ENSDARG00000116120 121 1.434 - - - - - - 0.726 - 0.708 cytochrome c oxidase subunit 6A2 [Source:ZFIN;Acc:ZDB-GENE-040912-129]
20. UBXN11 ENSDARG00000053828 22 0.999 - - - - - - - - 0.999 UBX domain protein 11 [Source:ZFIN;Acc:ZDB-GENE-100922-125]
21. pcdh1a6 ENSDARG00000097170 6 0.999 - - - - - - - - 0.999 protocadherin 1 alpha 6 [Source:ZFIN;Acc:ZDB-GENE-050203-2]
22. CABZ01060296.1 CABZ01060296.1 9 0.999 - - - - - - - - 0.999
23. CR854923.1 CR854923.1 18 0.998 - - - - - - - - 0.998
24. C20H2orf70 C20H2orf70 8 0.998 - - - - - - - - 0.998
25. si:dkey-20i20.11 ENSDARG00000101885 17 0.998 - - - - - - - - 0.998 si:dkey-20i20.11 [Source:ZFIN;Acc:ZDB-GENE-060503-58]
26. wnt5a ENSDARG00000104973 21 0.997 - - - - - - - - 0.997 wingless-type MMTV integration site family, member 5a [Source:ZFIN;Acc:ZDB-GENE-060328-3]
27. dckl1b dckl1b 115 0.996 0.996 - - - - - - - -
28. slc22a5 ENSDARG00000101021 20 0.988 - - - - - - - - 0.988 solute carrier family 22 (organic cation/carnitine transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-091012-1]
29. SLC15A5 ENSDARG00000089974 18 0.983 - - - - - - - - 0.983 solute carrier family 15 member 5 [Source:HGNC Symbol;Acc:HGNC:33455]
30. efemp2b_1 ENSDARG00000020811 77 0.982 - - - - - - - - 0.982 EGF containing fibulin extracellular matrix protein 2b [Source:ZFIN;Acc:ZDB-GENE-030219-125]
31. rac1l_1 ENSDARG00000054649, ENSDARG00000096549 12 0.981 - - - - - - - - 0.981 Rac family small GTPase 1, like [Source:ZFIN;Acc:ZDB-GENE-060315-6]
32. si:dkeyp-1h4.9 si:dkeyp-1h4.9 189 0.979 0.979 - - - - - - - -
33. PLA2G10 PLA2G10 9 0.976 - - - - - - - - 0.976
34. si:dkey-220o21.2 si:dkey-220o21.2 19 0.968 - - - - - - - - 0.968
35. CLDN10 CLDN10 38 0.966 - - - - - - 0.966 - -
36. cx28.6 ENSDARG00000003925 146 0.962 0.962 - - - - - - - - connexin 28.6 [Source:ZFIN;Acc:ZDB-GENE-040406-4]
37. ak8 ENSDARG00000030961, ENSDARG00000113361, ENSDARG00000116619 50 0.958 - - - - - - - - 0.958 adenylate kinase 8 [Source:ZFIN;Acc:ZDB-GENE-050522-275]
38. GCNT7 ENSDARG00000040608 91 0.958 - - - - - - 0.958 - - glucosaminyl (N-acetyl) transferase family member 7 [Source:ZFIN;Acc:ZDB-GENE-120919-3]
39. CABZ01058371.1 CABZ01058371.1 23 0.957 - - - - - - - - 0.957
40. tmc4 ENSDARG00000031757 30 0.953 - - - - - - 0.953 - - transmembrane channel-like 4 [Source:ZFIN;Acc:ZDB-GENE-030131-7489]
41. hoxd12a ENSDARG00000059263 795 0.953 0.953 - - - - - - - - homeobox D12a [Source:ZFIN;Acc:ZDB-GENE-990415-118]
42. GPR119 GPR119 41 0.952 - - - - - - 0.952 - -
43. CABZ01087670.1 CABZ01087670.1 411 0.949 0.949 - - - - - - - -
44. ARSI_1 ARSI_1 38 0.947 - - - - - - - - 0.947
45. RHBDF1 RHBDF1 131 0.944 - - - - - - 0.944 - -
46. CR396586.2 CR396586.2 103 0.944 0.944 - - - - - - - -
47. mthfd2l ENSDARG00000054199 25 0.941 - - - - - - - - 0.941 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2 like [Source:ZFIN;Acc:ZDB-GENE-030131-5707]
48. cyb5d1 ENSDARG00000056007 67 0.939 - - - - - - - - 0.939 cytochrome b5 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050417-173]
49. ripk2 ENSDARG00000104290 71 0.939 0.939 - - - - - - - - receptor-interacting serine-threonine kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030902-3]
50. caspb ENSDARG00000052039 4329 0.938 0.938 - - - - - - - - caspase b [Source:ZFIN;Acc:ZDB-GENE-020812-1]
51. casz1 ENSDARG00000037030 85 0.938 - - - - - - - - 0.938 castor zinc finger 1 [Source:ZFIN;Acc:ZDB-GENE-060130-108]
52. glis3 ENSDARG00000069726 59 0.937 - - - - - - 0.937 - - GLIS family zinc finger 3 [Source:ZFIN;Acc:ZDB-GENE-070112-2232]
53. rcan3 ENSDARG00000032623, ENSDARG00000115470 730 0.936 - - - - - - - - 0.936 regulator of calcineurin 3 [Source:ZFIN;Acc:ZDB-GENE-040718-445]
54. tmem237a ENSDARG00000041735 13 0.935 - - - - - - - - 0.935 transmembrane protein 237a [Source:ZFIN;Acc:ZDB-GENE-070402-3]
55. ENKD1 ENSDARG00000043550 44 0.935 - - - - - - - - 0.935 enkurin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25246]
56. terf1 ENSDARG00000058710 317 0.934 0.934 - - - - - - - - telomeric repeat binding factor (NIMA-interacting) 1 [Source:ZFIN;Acc:ZDB-GENE-090612-2]
57. si:dkeyp-104f11.5 si:dkeyp-104f11.5 30 0.933 - - - - - - - - 0.933
58. BEGAIN_1 BEGAIN_1 7 0.932 - - - - - - - - 0.932
59. VPS37B ENSDARG00000039319, ENSDARG00000109293 150 0.932 0.932 - - - - - - - - vacuolar protein sorting 37 homolog B (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060526-254]
60. NFATC4 ENSDARG00000054162 44 0.93 - - - - - - - - 0.930 nuclear factor of activated T cells 4 [Source:ZFIN;Acc:ZDB-GENE-070912-659]
61. dzip1l ENSDARG00000074265 61 0.93 - - - - - - 0.930 - - DAZ interacting zinc finger protein 1-like [Source:ZFIN;Acc:ZDB-GENE-051113-196]
62. DRD5 DRD5 142 0.929 - 0.929 - - - - - - -
63. galm ENSDARG00000057630, ENSDARG00000111113, ENSDARG00000115399 109 0.928 - 0.928 - - - - - - - galactose mutarotase [Source:ZFIN;Acc:ZDB-GENE-040718-66]
64. chm ENSDARG00000003845 498 0.923 - - - - - - - - 0.923 choroideremia (Rab escort protein 1) [Source:ZFIN;Acc:ZDB-GENE-030318-2]
65. csf1rb ENSDARG00000053624 9 0.922 - - - - - - - - 0.922 colony stimulating factor 1 receptor, b [Source:ZFIN;Acc:ZDB-GENE-091118-1]
66. spef2 ENSDARG00000098330 59 0.922 - - - - - - - - 0.922 sperm flagellar 2 [Source:ZFIN;Acc:ZDB-GENE-060526-47]
67. AL935046.1 AL935046.1 89 0.92 - - - - - - 0.920 - -
68. st8sia1 ENSDARG00000098221 34 0.92 - - - - - - - - 0.920 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-051005-1]
69. mir130b 180 0.92 - - - - - - - - 0.920 microRNA 130b
70. zgc:113030 ENSDARG00000069869 53 0.919 - - - - - - - - 0.919 zgc:113030 [Source:ZFIN;Acc:ZDB-GENE-050522-528]
71. TBC1D10B ENSDARG00000078604, ENSDARG00000114712 453 0.917 0.917 - - - - - - - - TBC1 domain family, member 10b [Source:ZFIN;Acc:ZDB-GENE-030131-7754]
72. zgc:158706 zgc:158706 15 0.917 - - - - - - - - 0.917
73. zgc:92594 ENSDARG00000089517 83 0.917 - - - - - - 0.917 - - zgc:92594 [Source:ZFIN;Acc:ZDB-GENE-040718-482]
74. fasn_1 ENSDARG00000087657 31 0.916 - - - - - - - - 0.916 fatty acid synthase [Source:ZFIN;Acc:ZDB-GENE-030131-7802]
75. vps33b ENSDARG00000044813 177 0.916 - 0.916 - - - - - - - vacuolar protein sorting 33B [Source:ZFIN;Acc:ZDB-GENE-050327-73]
76. BX294190.1 BX294190.1 17 0.914 - - - - - - - - 0.914
77. pcyt1ab ENSDARG00000004492 386 0.914 0.914 - - - - - - - - phosphate cytidylyltransferase 1, choline, alpha b [Source:ZFIN;Acc:ZDB-GENE-050522-114]
78. UFSP1 ENSDARG00000061610 81 0.914 - - - - - - - - 0.914 UFM1-specific peptidase 1 (non-functional) [Source:ZFIN;Acc:ZDB-GENE-070410-124]
79. thbs3a ENSDARG00000077641 631 0.913 - - - - - - - - 0.913 thrombospondin 3a [Source:ZFIN;Acc:ZDB-GENE-020708-3]
80. sema3h ENSDARG00000042616 75 0.911 - - - - - - - - 0.911 sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3H [Source:ZFIN;Acc:ZDB-GENE-990715-8]
81. PRRT4 ENSDARG00000088343 36 0.91 - - - - - - - - 0.910 proline-rich transmembrane protein 4 [Source:ZFIN;Acc:ZDB-GENE-140106-210]
82. dnah1 ENSDARG00000100115 17 0.909 - - - - - - - - 0.909 dynein, axonemal, heavy chain 1 [Source:ZFIN;Acc:ZDB-GENE-081015-3]
83. nostrin ENSDARG00000077866 85 0.909 - 0.909 - - - - - - - nitric oxide synthase trafficking [Source:ZFIN;Acc:ZDB-GENE-070522-2]
84. agpat9 agpat9 938 0.908 - 0.908 - - - - - - -
85. si:rp71-17i16.6 ENSDARG00000095453 167 0.908 - - - - - - 0.908 - - si:rp71-17i16.6 [Source:ZFIN;Acc:ZDB-GENE-090313-410]
86. si:dkey-1b17.1 ENSDARG00000102258 15 0.906 - - - - - - - - 0.906 si:dkey-1b17.1 [Source:ZFIN;Acc:ZDB-GENE-050208-688]
87. RNF39 RNF39 52 0.905 - - - - - - - - 0.905
88. zgc:63568 ENSDARG00000087262 76 0.904 - 0.904 - - - - - - - zgc:63568 [Source:ZFIN;Acc:ZDB-GENE-040426-1165]
89. gys2 ENSDARG00000004904 212 0.9 0.900 - - - - - - - - glycogen synthase 2 [Source:ZFIN;Acc:ZDB-GENE-030826-31]
90. BX119916.1 BX119916.1 19 0.899 - - - - - - 0.899 - -
91. sema6d ENSDARG00000002748 133 0.898 - - - - - - - - 0.898 sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D [Source:ZFIN;Acc:ZDB-GENE-040426-1933]
92. galk2 ENSDARG00000004059 122 0.898 - - - - - - 0.898 - - galactokinase 2 [Source:ZFIN;Acc:ZDB-GENE-041114-143]
93. TAF2 ENSDARG00000102307 1401 0.898 0.898 - - - - - - - - TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-3207]
94. lcp2a ENSDARG00000055955 23 0.896 - 0.896 - - - - - - - lymphocyte cytosolic protein 2a [Source:ZFIN;Acc:ZDB-GENE-041114-97]
95. BX005423.3 BX005423.3 33 0.896 - 0.896 - - - - - - -
96. picalm picalm 122 0.896 - 0.896 - - - - - - -
97. slc2a1a ENSDARG00000001437, ENSDARG00000116129 1614 0.895 - - - - - - 0.895 - - solute carrier family 2 (facilitated glucose transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3158]
98. elf3 ENSDARG00000077982 211 0.895 - - - - - - 0.895 - - E74-like factor 3 (ets domain transcription factor, epithelial-specific ) [Source:ZFIN;Acc:ZDB-GENE-030131-8760]
99. BPHL ENSDARG00000102877 28 0.893 - 0.893 - - - - - - - biphenyl hydrolase like [Source:ZFIN;Acc:ZDB-GENE-170623-2]
100. zdhhc23b ENSDARG00000003899, ENSDARG00000116894 31 0.892 - - - - - - - - 0.892 zinc finger, DHHC-type containing 23b [Source:ZFIN;Acc:ZDB-GENE-040808-13]

There are 730 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA