Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for slc1a6

Gene Name Gene ID Reads Annotation
slc1a6 ENSDARG00000010096 764 solute carrier family 1 (high affinity aspartate/glutamate transporter), member 6 [Source:ZFIN;Acc:ZDB-GENE-071004-45]










Genes with expression patterns similar to slc1a6

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. slc1a6 ENSDARG00000010096 764 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 solute carrier family 1 (high affinity aspartate/glutamate transporter), member 6 [Source:ZFIN;Acc:ZDB-GENE-071004-45]
2. rbl1 ENSDARG00000008141 1217 1.761 - - 0.998 - - - 0.763 - - retinoblastoma-like 1 (p107) [Source:ZFIN;Acc:ZDB-GENE-030131-8179]
3. mrps18b ENSDARG00000007065 2121 1.736 - 0.743 0.993 - - - - - - mitochondrial ribosomal protein S18B [Source:ZFIN;Acc:ZDB-GENE-050417-278]
4. alas2 ENSDARG00000038643, ENSDARG00000113125 4935 1.703 - 0.721 0.982 - - - - - - aminolevulinate, delta-, synthase 2 [Source:ZFIN;Acc:ZDB-GENE-001229-1]
5. nol12 ENSDARG00000038027 2288 1.699 - - 0.999 - - - 0.700 - - nucleolar protein 12 [Source:ZFIN;Acc:ZDB-GENE-040426-1035]
6. rnaseh2a ENSDARG00000018891 1979 1.696 - - 0.903 - - - 0.793 - - ribonuclease H2, subunit A [Source:ZFIN;Acc:ZDB-GENE-040426-976]
7. rbms3 ENSDARG00000044574 2514 1.673 - - 0.892 - - - 0.781 - - RNA binding motif, single stranded interacting protein [Source:ZFIN;Acc:ZDB-GENE-060929-244]
8. prpsap2 ENSDARG00000019326 1463 1.647 0.756 - - - - - 0.891 - - phosphoribosyl pyrophosphate synthetase-associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2077]
9. ccdc101 ccdc101 778 1.624 - 0.869 - - - - 0.755 - -
10. cdkal1 ENSDARG00000104848 2102 1.621 - 0.715 0.906 - - - - - - CDK5 regulatory subunit associated protein 1-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1443]
11. gmeb1 ENSDARG00000062060 456 1.598 0.838 0.760 - - - - - - - glucocorticoid modulatory element binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060503-35]
12. foxn2b ENSDARG00000045105, ENSDARG00000112523 525 1.569 - 0.716 - - - - 0.853 - - forkhead box N2b [Source:ZFIN;Acc:ZDB-GENE-050417-1]
13. si:dkeyp-73a2.2 ENSDARG00000079785 313 1.505 0.764 - - - - - 0.741 - - si:dkeyp-73a2.2 [Source:NCBI gene;Acc:100307112]
14. anapc4 ENSDARG00000032237 385 1.501 - 0.712 - - - - 0.789 - - anaphase promoting complex subunit 4 [Source:ZFIN;Acc:ZDB-GENE-041212-10]
15. si:dkey-67c22.2 ENSDARG00000055389 6410 1.492 - - 0.723 - - - 0.769 - - si:dkey-67c22.2 [Source:ZFIN;Acc:ZDB-GENE-030131-5845]
16. eif4e1c ENSDARG00000012274, ENSDARG00000116158 4768 1.476 0.711 - - - - 0.765 - - - eukaryotic translation initiation factor 4E family member 1c [Source:ZFIN;Acc:ZDB-GENE-050417-398]
17. wrap53 ENSDARG00000086150 975 1.461 - - - - - - 0.760 - 0.701 WD repeat containing, antisense to TP53 [Source:ZFIN;Acc:ZDB-GENE-030131-515]
18. PTGIR ENSDARG00000038278 254 1.441 0.719 - - - - - 0.722 - - prostaglandin I2 receptor [Source:ZFIN;Acc:ZDB-GENE-120511-1]
19. glrx2 ENSDARG00000100944, ENSDARG00000110094 151 1.427 - 0.726 - - - - 0.701 - - glutaredoxin 2 [Source:ZFIN;Acc:ZDB-GENE-040718-101]
20. si:dkey-240e12.6 ENSDARG00000110137 674 1 - - 1.000 - - - - - - si:dkey-240e12.6 [Source:ZFIN;Acc:ZDB-GENE-050208-367]
21. cacnb2a ENSDARG00000099045 374 1 - - 1.000 - - - - - - calcium channel, voltage-dependent, beta 2a [Source:ZFIN;Acc:ZDB-GENE-080808-7]
22. myo1ea ENSDARG00000036179 891 0.999 - - 0.999 - - - - - - myosin IE, a [Source:ZFIN;Acc:ZDB-GENE-030131-5127]
23. TRIM35_10 TRIM35_10 484 0.999 - - 0.999 - - - - - -
24. wdr16 wdr16 532 0.999 - - 0.999 - - - - - -
25. plxnc1 ENSDARG00000015278 501 0.999 - - 0.999 - - - - - - plexin C1 [Source:ZFIN;Acc:ZDB-GENE-030131-1620]
26. nipal3 ENSDARG00000021147, ENSDARG00000109606 1058 0.999 - - 0.999 - - - - - - NIPA like domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040718-379]
27. ZBTB41 ENSDARG00000054984 464 0.999 - - 0.999 - - - - - - zinc finger and BTB domain containing 41 [Source:ZFIN;Acc:ZDB-GENE-130530-649]
28. FHAD1 ENSDARG00000056723, ENSDARG00000116072 406 0.999 - - 0.999 - - - - - - forkhead-associated (FHA) phosphopeptide binding domain 1 [Source:ZFIN;Acc:ZDB-GENE-041210-354]
29. mknk1 ENSDARG00000018411 749 0.999 - - 0.999 - - - - - - MAP kinase interacting serine/threonine kinase 1 [Source:ZFIN;Acc:ZDB-GENE-080220-11]
30. elp6 ENSDARG00000060445, ENSDARG00000115612 458 0.999 - - 0.999 - - - - - - elongator acetyltransferase complex subunit 6 [Source:ZFIN;Acc:ZDB-GENE-060825-249]
31. fryl ENSDARG00000040001 3256 0.999 - - 0.999 - - - - - - furry homolog, like [Source:ZFIN;Acc:ZDB-GENE-040914-58]
32. MYO1D ENSDARG00000036863 768 0.999 - - 0.999 - - - - - - myosin ID [Source:HGNC Symbol;Acc:HGNC:7598]
33. brip1 ENSDARG00000074410, ENSDARG00000113993 501 0.999 - - 0.999 - - - - - - BRCA1 interacting protein C-terminal helicase 1 [Source:ZFIN;Acc:ZDB-GENE-081107-11]
34. laptm4a ENSDARG00000006397 1698 0.999 - - 0.999 - - - - - - lysosomal protein transmembrane 4 alpha [Source:ZFIN;Acc:ZDB-GENE-030131-1024]
35. rnf14 ENSDARG00000043905 862 0.999 - - 0.999 - - - - - - ring finger protein 14 [Source:ZFIN;Acc:ZDB-GENE-040625-65]
36. zgc:171759 ENSDARG00000100259, ENSDARG00000109737, ENSDARG00000111964, ENSDARG00000114195, ENSDARG00000115938 340 0.999 - - 0.999 - - - - - - zgc:171759 [Source:ZFIN;Acc:ZDB-GENE-071004-32]
37. CR954963.1 ENSDARG00000097153 1135 0.998 - - 0.998 - - - - - -
38. tlx2 ENSDARG00000011273 870 0.998 - - 0.998 - - - - - - T cell leukemia homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-020208-1]
39. hdac10 ENSDARG00000086458 676 0.998 - - 0.998 - - - - - - histone deacetylase 10 [Source:ZFIN;Acc:ZDB-GENE-030131-5464]
40. gmpr2 ENSDARG00000061301 1132 0.998 - - 0.998 - - - - - - guanosine monophosphate reductase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1238]
41. gstt1b ENSDARG00000017388, ENSDARG00000112401 2107 0.998 - - 0.998 - - - - - - glutathione S-transferase theta 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1491]
42. sesn3 ENSDARG00000015822 5328 0.998 - - 0.998 - - - - - - sestrin 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2924]
43. ect2 ENSDARG00000007278 1193 0.998 - - 0.998 - - - - - - epithelial cell transforming 2 [Source:ZFIN;Acc:ZDB-GENE-040831-2]
44. dhdds ENSDARG00000039851 1135 0.997 - - 0.997 - - - - - - dehydrodolichyl diphosphate synthase [Source:ZFIN;Acc:ZDB-GENE-040426-2236]
45. dna2 ENSDARG00000078759 846 0.997 - - 0.997 - - - - - - DNA replication helicase/nuclease 2 [Source:ZFIN;Acc:ZDB-GENE-090313-71]
46. abhd4 ENSDARG00000102887 748 0.997 - - 0.997 - - - - - - abhydrolase domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-050417-83]
47. six1b ENSDARG00000026473 1908 0.997 - - 0.997 - - - - - - SIX homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2308]
48. aplnra ENSDARG00000002172 955 0.997 - - 0.997 - - - - - - apelin receptor a [Source:ZFIN;Acc:ZDB-GENE-060929-512]
49. daam1b ENSDARG00000009689 1520 0.997 - - 0.997 - - - - - - dishevelled associated activator of morphogenesis 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4212]
50. SIK1 ENSDARG00000058606 1982 0.997 - - 0.997 - - - - - - salt-inducible kinase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9446]
51. celsr1b ENSDARG00000058259 1219 0.997 - - 0.997 - - - - - - cadherin EGF LAG seven-pass G-type receptor 1b [Source:ZFIN;Acc:ZDB-GENE-050823-4]
52. C11H12orf10 C11H12orf10 1305 0.997 - - 0.997 - - - - - -
53. foxa2 ENSDARG00000003411 2309 0.996 - - 0.996 - - - - - - forkhead box A2 [Source:ZFIN;Acc:ZDB-GENE-980526-404]
54. PLEKHH3 ENSDARG00000070174 2117 0.996 - - 0.996 - - - - - - pleckstrin homology, MyTH4 and FERM domain containing H3 [Source:HGNC Symbol;Acc:HGNC:26105]
55. elf2b ENSDARG00000079626, ENSDARG00000117064 3057 0.996 - - 0.996 - - - - - - E74-like factor 2b (ets domain transcription factor) [Source:ZFIN;Acc:ZDB-GENE-031215-1]
56. itga3b ENSDARG00000012824 1872 0.996 - - 0.996 - - - - - - integrin, alpha 3b [Source:ZFIN;Acc:ZDB-GENE-050411-55]
57. gtf2e2 ENSDARG00000012672, ENSDARG00000109689, ENSDARG00000115211 1677 0.996 - - 0.996 - - - - - - general transcription factor IIE, polypeptide 2, beta [Source:ZFIN;Acc:ZDB-GENE-030131-6794]
58. TCEB3 2429 0.996 - - 0.996 - - - - - - transcription elongation factor B (SIII), polypeptide 3
59. faub ENSDARG00000043663, ENSDARG00000111416, ENSDARG00000113054 1451 0.996 - - 0.996 - - - - - - Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed b [Source:ZFIN;Acc:ZDB-GENE-050417-416]
60. hadhaa ENSDARG00000057128 2179 0.995 - - 0.995 - - - - - - hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha a [Source:ZFIN;Acc:ZDB-GENE-031222-5]
61. MALSU1 MALSU1 1251 0.995 - - 0.995 - - - - - -
62. itgb1bp1 ENSDARG00000007169 2723 0.995 - - 0.995 - - - - - - integrin beta 1 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-051113-264]
63. lsm14aa ENSDARG00000006600 2298 0.994 - - 0.994 - - - - - - LSM14A mRNA processing body assembly factor a [Source:ZFIN;Acc:ZDB-GENE-040426-1567]
64. nanos1 ENSDARG00000109337 2494 0.994 - - 0.994 - - - - - - nanos homolog 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1623]
65. neu1 ENSDARG00000008832 2848 0.993 - - 0.993 - - - - - - neuraminidase 1 [Source:ZFIN;Acc:ZDB-GENE-060503-592]
66. mtx2 ENSDARG00000029415 2205 0.992 - - 0.992 - - - - - - metaxin 2 [Source:ZFIN;Acc:ZDB-GENE-021210-2]
67. cry2a cry2a 2728 0.992 - - 0.992 - - - - - -
68. si:dkey-193c22.2 ENSDARG00000076735 2791 0.991 - - 0.991 - - - - - - si:dkey-193c22.2 [Source:ZFIN;Acc:ZDB-GENE-070705-337]
69. ppp1r14bb ENSDARG00000030161 2349 0.991 - - 0.991 - - - - - - protein phosphatase 1, regulatory (inhibitor) subunit 14Bb [Source:ZFIN;Acc:ZDB-GENE-030616-595]
70. mrpl15 ENSDARG00000101306 2796 0.99 - - 0.990 - - - - - - mitochondrial ribosomal protein L15 [Source:ZFIN;Acc:ZDB-GENE-040801-168]
71. tfap2a ENSDARG00000059279 3741 0.99 - - 0.990 - - - - - - transcription factor AP-2 alpha [Source:ZFIN;Acc:ZDB-GENE-011212-6]
72. PELP1 ENSDARG00000079313 5771 0.99 - - 0.990 - - - - - - proline, glutamate and leucine rich protein 1 [Source:ZFIN;Acc:ZDB-GENE-140106-164]
73. eppk1 ENSDARG00000096359 4315 0.99 - - 0.990 - - - - - - epiplakin 1 [Source:ZFIN;Acc:ZDB-GENE-030416-1]
74. sdhb ENSDARG00000075768 5493 0.99 - - 0.990 - - - - - - succinate dehydrogenase complex, subunit B, iron sulfur (Ip) [Source:ZFIN;Acc:ZDB-GENE-030131-8005]
75. cebpg ENSDARG00000036073 3791 0.99 - - 0.990 - - - - - - CCAAT enhancer binding protein gamma [Source:ZFIN;Acc:ZDB-GENE-020111-5]
76. fras1 ENSDARG00000054619, ENSDARG00000114204 4459 0.989 - - 0.989 - - - - - - Fraser extracellular matrix complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-060526-68]
77. C7H16orf87 C7H16orf87 5197 0.989 - - 0.989 - - - - - -
78. hectd1 ENSDARG00000054213 3501 0.989 - - 0.989 - - - - - - HECT domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030616-153]
79. arcn1b ENSDARG00000031214 4529 0.988 - - 0.988 - - - - - - archain 1b [Source:ZFIN;Acc:ZDB-GENE-040121-7]
80. tmem47 ENSDARG00000057322 4691 0.988 - - 0.988 - - - - - - transmembrane protein 47 [Source:ZFIN;Acc:ZDB-GENE-040426-2644]
81. CPT1A CPT1A 4004 0.987 - - 0.987 - - - - - -
82. asna1 ENSDARG00000018190 5253 0.987 - - 0.987 - - - - - - arsA arsenite transporter, ATP-binding, homolog 1 (bacterial) [Source:ZFIN;Acc:ZDB-GENE-040625-120]
83. plxnb1b ENSDARG00000017211 4676 0.987 - - 0.987 - - - - - - plexin b1b [Source:ZFIN;Acc:ZDB-GENE-090812-4]
84. foxo3b ENSDARG00000042904 5046 0.985 - - 0.985 - - - - - - forkhead box O3b [Source:ZFIN;Acc:ZDB-GENE-990708-6]
85. tmeff1b ENSDARG00000056740 11253 0.984 - - 0.984 - - - - - - transmembrane protein with EGF-like and two follistatin-like domains 1b [Source:ZFIN;Acc:ZDB-GENE-050706-143]
86. nkx3-1 ENSDARG00000078280 1205 0.984 - - 0.984 - - - - - - NK3 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-081104-238]
87. wdr45 ENSDARG00000090219 829 0.984 - - 0.984 - - - - - - WD repeat domain 45 [Source:ZFIN;Acc:ZDB-GENE-040426-990]
88. ACVR1B ACVR1B 4824 0.983 - - 0.983 - - - - - -
89. grpel2 ENSDARG00000069421 5673 0.983 - - 0.983 - - - - - - GrpE-like 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-091204-188]
90. NDUFB2 ENSDARG00000045490 9141 0.982 - - 0.982 - - - - - - NADH:ubiquinone oxidoreductase subunit B2 [Source:ZFIN;Acc:ZDB-GENE-040426-1762]
91. rps6ka3a ENSDARG00000035556, ENSDARG00000116641 3608 0.982 - - 0.982 - - - - - - ribosomal protein S6 kinase a, polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-030219-119]
92. yth2 yth2 3716 0.981 - - 0.981 - - - - - -
93. gm2a ENSDARG00000088439 5387 0.981 - - 0.981 - - - - - - GM2 ganglioside activator [Source:ZFIN;Acc:ZDB-GENE-050417-373]
94. scrt2 ENSDARG00000056175 4331 0.98 - - 0.980 - - - - - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
95. camk2d2 ENSDARG00000014273 2840 0.98 - - 0.980 - - - - - - calcium/calmodulin-dependent protein kinase (CaM kinase) II delta 2 [Source:ZFIN;Acc:ZDB-GENE-040718-277]
96. mrps18a ENSDARG00000024465 5187 0.979 - - 0.979 - - - - - - mitochondrial ribosomal protein S18A [Source:ZFIN;Acc:ZDB-GENE-041210-109]
97. gabarapl2 ENSDARG00000027200 5120 0.979 - - 0.979 - - - - - - GABA(A) receptor-associated protein like 2 [Source:ZFIN;Acc:ZDB-GENE-040718-336]
98. si:ch211-113a14.18 ENSDARG00000051735 1253 0.978 - - 0.978 - - - - - - si:ch211-113a14.18 [Source:ZFIN;Acc:ZDB-GENE-121214-116]
99. gmppb ENSDARG00000017658 3484 0.977 - - 0.977 - - - - - - GDP-mannose pyrophosphorylase B [Source:ZFIN;Acc:ZDB-GENE-040801-234]
100. mrps21 ENSDARG00000070985 3943 0.977 - - 0.977 - - - - - - mitochondrial ribosomal protein S21 [Source:ZFIN;Acc:ZDB-GENE-070615-13]

There are 752 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA