Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for slc1a3a

Gene Name Gene ID Reads Annotation
slc1a3a ENSDARG00000104431 9888 solute carrier family 1 (glial high affinity glutamate transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2159]










Genes with expression patterns similar to slc1a3a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. slc1a3a ENSDARG00000104431 9888 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 solute carrier family 1 (glial high affinity glutamate transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2159]
2. mapk12b ENSDARG00000006409 2246 4.172 0.874 0.744 - - - 0.910 0.934 - 0.710 mitogen-activated protein kinase 12b [Source:ZFIN;Acc:ZDB-GENE-041210-123]
3. pcdh1gc5 ENSDARG00000104826 10052 3.639 0.923 0.788 - - - 0.988 0.940 - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
4. zic4 ENSDARG00000031307 1228 3.622 0.940 0.823 - - - 0.973 0.886 - - zic family member 4 [Source:ZFIN;Acc:ZDB-GENE-040622-4]
5. nrn1a ENSDARG00000071860 1311 3.575 0.886 0.786 - - - 0.958 0.945 - - neuritin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-212]
6. rfx4 ENSDARG00000026395, ENSDARG00000116861 2047 3.55 0.899 0.738 - - - 0.955 0.958 - - regulatory factor X, 4 [Source:ZFIN;Acc:ZDB-GENE-040909-2]
7. gap43 ENSDARG00000099744 4114 3.52 0.937 0.703 - - - 0.978 0.902 - - growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
8. hpca ENSDARG00000018397, ENSDARG00000110115 3866 3.509 0.938 0.733 - - - 0.909 0.929 - - hippocalcin [Source:ZFIN;Acc:ZDB-GENE-040426-1683]
9. myt1b ENSDARG00000102879 5411 3.501 0.792 0.794 - - - 0.958 0.957 - - myelin transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-090313-67]
10. stx1b ENSDARG00000000503 2724 3.488 0.915 0.751 - - - 0.952 0.870 - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
11. scn8aa ENSDARG00000005775 792 3.476 0.880 0.755 - - - 0.966 0.875 - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
12. nova2 ENSDARG00000017673 7685 3.467 0.854 0.720 - - - 0.924 0.969 - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
13. adam23a ENSDARG00000062323 580 3.462 0.892 0.738 - - - 0.924 0.908 - - ADAM metallopeptidase domain 23a [Source:ZFIN;Acc:ZDB-GENE-070810-2]
14. atp2b3b ENSDARG00000023445 1424 3.455 0.855 0.742 - - - 0.934 0.924 - - ATPase plasma membrane Ca2+ transporting 3b [Source:ZFIN;Acc:ZDB-GENE-080409-2]
15. nadl1.1 1200 3.434 0.820 0.781 - - - 0.933 0.900 - - neural adhesion molecule L1.1, transcript variant X1
16. tnika ENSDARG00000056218 728 3.427 0.869 0.813 - - - 0.837 0.908 - - TRAF2 and NCK interacting kinase a [Source:ZFIN;Acc:ZDB-GENE-030131-3767]
17. pcsk1nl ENSDARG00000076170 1232 3.423 0.813 0.766 - - - 0.951 0.893 - - proprotein convertase subtilisin/kexin type 1 inhibitor, like [Source:ZFIN;Acc:ZDB-GENE-090427-2]
18. slc32a1 ENSDARG00000059775 1092 3.416 0.890 0.713 - - - 0.966 0.847 - - solute carrier family 32 (GABA vesicular transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-061201-1]
19. TUSC5 TUSC5 1436 3.416 0.923 0.752 - - - 0.939 0.802 - -
20. dpysl5a ENSDARG00000011141 1827 3.401 0.831 0.731 - - - 0.954 0.885 - - dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
21. atp1b4 ENSDARG00000053262 1337 3.381 0.755 0.712 - - - 0.955 0.959 - - ATPase Na+/K+ transporting subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-070412-1]
22. si:ch73-21g5.7 ENSDARG00000093156 9412 3.38 0.792 0.734 - - - 0.907 0.947 - - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
23. tmem35 ENSDARG00000052567 5685 3.365 0.893 0.720 - - - 0.805 0.947 - - transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
24. cers6 ENSDARG00000053583 247 3.355 0.832 0.710 - - - 0.907 0.906 - - ceramide synthase 6 [Source:ZFIN;Acc:ZDB-GENE-070522-1]
25. sox2 ENSDARG00000070913 2763 3.355 0.832 0.798 - - - 0.775 0.950 - - SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
26. nrarpb ENSDARG00000018958 6225 3.347 0.718 0.715 - - - 0.960 0.954 - - NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
27. add2 ENSDARG00000074581 1402 3.343 0.725 0.750 - - - 0.925 0.943 - - adducin 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-080718-4]
28. cacna2d3 ENSDARG00000078760 211 3.333 0.849 0.787 - - - 0.871 0.826 - - calcium channel, voltage dependent, alpha2/delta subunit 3 [Source:ZFIN;Acc:ZDB-GENE-030616-133]
29. nes ENSDARG00000088805 2710 3.333 0.817 0.719 - - - 0.850 0.947 - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
30. dpysl2b ENSDARG00000032083, ENSDARG00000109782 3487 3.33 0.701 0.727 - - - 0.950 0.952 - - dihydropyrimidinase-like 2b [Source:ZFIN;Acc:ZDB-GENE-031105-1]
31. BX957337.1 BX957337.1 1685 3.328 0.769 0.719 - - - 0.964 0.876 - -
32. CHL1 CHL1 1553 3.318 0.792 0.788 - - - 0.842 0.896 - -
33. mir10d-1 mir10d-1 860 3.288 0.760 0.718 - - - 0.949 0.861 - -
34. neurog1 ENSDARG00000056130 3924 3.28 0.824 0.726 - - - 0.789 0.941 - - neurogenin 1 [Source:ZFIN;Acc:ZDB-GENE-990415-174]
35. vsnl1a ENSDARG00000023228 1584 3.275 0.805 0.763 - - - 0.968 0.739 - - visinin-like 1a [Source:ZFIN;Acc:ZDB-GENE-041001-211]
36. CABZ01111990.1 CABZ01111990.1 4374 3.268 0.822 0.750 - - - 0.784 0.912 - -
37. cspg5a ENSDARG00000069981 1699 3.248 0.875 0.709 - - - 0.755 0.909 - - chondroitin sulfate proteoglycan 5a [Source:ZFIN;Acc:ZDB-GENE-080425-4]
38. gpr144 gpr144 479 3.243 0.860 0.777 - - - 0.752 0.854 - -
39. cntn4 ENSDARG00000098161, ENSDARG00000109387 437 3.241 0.705 0.757 - - - 0.910 0.869 - - contactin 4 [Source:ZFIN;Acc:ZDB-GENE-060929-776]
40. ywhag2 ENSDARG00000071658, ENSDARG00000116741 3326 3.239 0.764 0.750 - - - 0.953 0.772 - - 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-061023-2]
41. CLIP3 ENSDARG00000054456 734 3.224 0.783 0.723 - - - 0.804 0.914 - - CAP-GLY domain containing linker protein 3 [Source:ZFIN;Acc:ZDB-GENE-131127-193]
42. hoxa9b ENSDARG00000056819 3081 3.215 0.792 - - - - 0.831 0.890 - 0.702 homeobox A9b [Source:ZFIN;Acc:ZDB-GENE-000823-2]
43. upf3a ENSDARG00000069297, ENSDARG00000111067 196 3.213 0.805 0.710 - - - 0.831 0.867 - - UPF3A, regulator of nonsense mediated mRNA decay [Source:ZFIN;Acc:ZDB-GENE-060721-2]
44. ptprnb ENSDARG00000077047 2743 3.197 0.859 0.758 - - - 0.744 0.836 - - protein tyrosine phosphatase, receptor type, Nb [Source:ZFIN;Acc:ZDB-GENE-100505-1]
45. map1aa ENSDARG00000059601 599 3.104 0.797 0.709 - - - 0.769 0.829 - - microtubule-associated protein 1Aa [Source:ZFIN;Acc:ZDB-GENE-100426-2]
46. SKOR2 SKOR2 1041 3.073 0.741 0.762 - - - 0.771 0.799 - -
47. sypa ENSDARG00000042974, ENSDARG00000110528 3217 2.814 0.924 - - - - 0.977 0.913 - - synaptophysin a [Source:ZFIN;Acc:ZDB-GENE-031104-2]
48. zic1 ENSDARG00000015567 2520 2.804 0.919 - - - - 0.920 0.965 - - zic family member 1 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-000208-4]
49. adcyap1b ENSDARG00000027740 1539 2.803 0.903 - - - - 0.974 0.926 - - adenylate cyclase activating polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-041010-89]
50. stmn1b ENSDARG00000033655 9491 2.789 0.925 - - - - 0.926 0.938 - - stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
51. tuba1c ENSDARG00000055216 8384 2.788 0.909 - - - - 0.982 0.897 - - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
52. mllt11 ENSDARG00000071026 2518 2.786 0.903 - - - - 0.979 0.904 - - MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
53. nmnat2 ENSDARG00000004580 370 2.757 0.886 - - - - 0.921 0.950 - - nicotinamide nucleotide adenylyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8201]
54. atp2b3a ENSDARG00000043474, ENSDARG00000112865 914 2.757 0.938 - - - - 0.934 0.885 - - ATPase plasma membrane Ca2+ transporting 3a [Source:ZFIN;Acc:ZDB-GENE-040718-174]
55. syt11a ENSDARG00000057913 1145 2.756 0.864 - - - - 0.953 0.939 - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
56. TUBB8P7_1 TUBB8P7_1 2722 2.751 0.919 - - - - 0.969 0.863 - -
57. slc1a2b ENSDARG00000102453 3136 2.748 0.907 - - - - 0.965 0.876 - - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
58. snap25a ENSDARG00000020609 4537 2.743 0.930 - - - - 0.972 0.841 - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
59. ZFHX3 ENSDARG00000103057 7759 2.741 0.891 - - - - 0.933 0.917 - - zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]
60. plp1a ENSDARG00000103732 3544 2.736 0.880 - - - - 0.918 0.938 - - proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
61. dpysl3 ENSDARG00000002587 4381 2.735 0.918 - - - - 0.921 0.896 - - dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
62. rusc1 ENSDARG00000078125 617 2.728 0.882 - - - - 0.917 0.929 - - RUN and SH3 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100922-274]
63. rtn1b ENSDARG00000021143 1682 2.727 0.849 - - - - 0.975 0.903 - - reticulon 1b [Source:ZFIN;Acc:ZDB-GENE-030710-3]
64. eno2 ENSDARG00000014287 2162 2.726 0.846 - - - - 0.917 0.963 - - enolase 2 [Source:ZFIN;Acc:ZDB-GENE-040704-27]
65. rab3ab ENSDARG00000043835 1267 2.724 0.889 - - - - 0.955 0.880 - - RAB3A, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-041210-268]
66. vim ENSDARG00000010008 3551 2.717 0.804 - - - - 0.933 0.980 - - vimentin [Source:ZFIN;Acc:ZDB-GENE-011212-3]
67. stmn2a ENSDARG00000033234 2272 2.716 0.918 - - - - 0.956 0.842 - - stathmin 2a [Source:ZFIN;Acc:ZDB-GENE-041010-85]
68. AGO1 ENSDARG00000092644 4521 2.712 0.920 - - - - 0.847 0.945 - - argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]
69. dnajc5aa ENSDARG00000042948 2885 2.707 0.873 - - - - 0.888 0.946 - - DnaJ (Hsp40) homolog, subfamily C, member 5aa [Source:ZFIN;Acc:ZDB-GENE-031113-20]
70. atp1a1b ENSDARG00000019856, ENSDARG00000115121 1953 2.706 0.917 - - - - 0.933 0.856 - - ATPase Na+/K+ transporting subunit alpha 1b [Source:ZFIN;Acc:ZDB-GENE-001212-5]
71. gfap ENSDARG00000025301 5584 2.705 0.836 - - - - 0.962 0.907 - - glial fibrillary acidic protein [Source:ZFIN;Acc:ZDB-GENE-990914-3]
72. amph ENSDARG00000007663 599 2.703 0.932 - - - - 0.910 0.861 - - amphiphysin [Source:ZFIN;Acc:ZDB-GENE-040426-1711]
73. vgf ENSDARG00000105529 247 2.702 0.822 - - - - 0.933 0.947 - - VGF nerve growth factor inducible [Source:ZFIN;Acc:ZDB-GENE-121009-2]
74. atp6v0cb ENSDARG00000036577 3472 2.7 0.789 - - - - 0.961 0.950 - - ATPase H+ transporting V0 subunit cb [Source:ZFIN;Acc:ZDB-GENE-030131-4127]
75. epha4b ENSDARG00000011600 3110 2.698 0.899 - - - - 0.906 0.893 - - eph receptor A4b [Source:ZFIN;Acc:ZDB-GENE-030826-6]
76. snap25b ENSDARG00000058117 469 2.693 0.890 - - - - 0.896 0.907 - - synaptosomal-associated protein, 25b [Source:ZFIN;Acc:ZDB-GENE-980526-392]
77. cldn5a ENSDARG00000043716 3865 2.691 0.871 - - - - 0.876 0.944 - - claudin 5a [Source:ZFIN;Acc:ZDB-GENE-040426-2442]
78. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 2.687 0.928 - - - - 0.887 0.872 - - cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
79. ppp3ca ENSDARG00000004988 615 2.681 0.907 - - - - 0.930 0.844 - - protein phosphatase 3, catalytic subunit, alpha isozyme [Source:ZFIN;Acc:ZDB-GENE-091113-24]
80. scrt2 ENSDARG00000056175 4331 2.677 0.896 - - - - 0.965 0.816 - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
81. adam11 ENSDARG00000079204 298 2.673 0.915 - - - - 0.917 0.841 - - ADAM metallopeptidase domain 11 [Source:ZFIN;Acc:ZDB-GENE-070808-3]
82. stmn2b ENSDARG00000070537 1586 2.67 0.882 - - - - 0.980 0.808 - - stathmin 2b [Source:ZFIN;Acc:ZDB-GENE-050522-207]
83. gabra5 ENSDARG00000070730 156 2.669 0.860 - - - - 0.903 0.906 - - gamma-aminobutyric acid (GABA) A receptor, alpha 5 [Source:ZFIN;Acc:ZDB-GENE-081104-30]
84. si:dkey-25e11.10 si:dkey-25e11.10 955 2.666 0.854 - - - - 0.913 0.899 - -
85. gnao1a ENSDARG00000016676 8184 2.665 0.921 0.798 - - - - 0.946 - - guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, a [Source:ZFIN;Acc:ZDB-GENE-040426-1757]
86. SPOCK1 ENSDARG00000074644 794 2.665 0.837 - - - - 0.893 0.935 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:ZFIN;Acc:ZDB-GENE-110428-1]
87. MAP1A MAP1A 847 2.665 0.866 - - - - 0.969 0.830 - -
88. spock2 ENSDARG00000075393 791 2.664 0.802 - - - - 0.959 0.903 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2 [Source:ZFIN;Acc:ZDB-GENE-090312-170]
89. prrt1 ENSDARG00000062208 368 2.66 0.908 - - - - 0.831 0.921 - - proline-rich transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-060503-686]
90. negr1 ENSDARG00000021607 1051 2.66 0.873 - - - - 0.862 0.925 - - neuronal growth regulator 1 [Source:ZFIN;Acc:ZDB-GENE-040822-27]
91. necap1 ENSDARG00000020798 612 2.657 0.853 - - - - 0.928 0.876 - - NECAP endocytosis associated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1682]
92. C7H4orf48 C7H4orf48 1455 2.657 0.791 - - - - 0.960 0.906 - -
93. myt1a ENSDARG00000074030, ENSDARG00000116035 2839 2.657 - 0.816 - - - 0.909 0.932 - - myelin transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3885]
94. rbfox3 rbfox3 1443 2.654 0.872 - - - - 0.909 0.873 - -
95. irx1b ENSDARG00000056594 2224 2.65 0.835 - - - - 0.851 0.964 - - iroquois homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-010716-1]
96. TUBA1A ENSDARG00000001889 25294 2.646 0.725 - - - - 0.960 0.961 - - tubulin, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090507-4]
97. slc6a5_1 ENSDARG00000067964, ENSDARG00000111378 1111 2.646 0.906 - - - - 0.968 0.772 - - solute carrier family 6 (neurotransmitter transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-050105-2]
98. hmgb3a ENSDARG00000056725 15668 2.644 0.871 - - - - 0.916 0.857 - - high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
99. scn8ab ENSDARG00000018032, ENSDARG00000112543 883 2.642 0.905 - - - - 0.942 0.795 - - sodium channel, voltage gated, type VIII, alpha subunit b [Source:ZFIN;Acc:ZDB-GENE-060906-2]
100. ckbb ENSDARG00000043257 3503 2.631 0.859 - - - - 0.930 0.842 - - creatine kinase, brain b [Source:ZFIN;Acc:ZDB-GENE-020103-2]

There are 2367 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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