Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for slc1a1

Gene Name Gene ID Reads Annotation
slc1a1 ENSDARG00000020212 104 solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1 [Source:ZFIN;Acc:ZDB-GENE-040718-414]










Genes with expression patterns similar to slc1a1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. slc1a1 ENSDARG00000020212 104 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1 [Source:ZFIN;Acc:ZDB-GENE-040718-414]
2. sncgb ENSDARG00000109715 1014 3.313 0.847 - - - - 0.762 0.889 0.815 - synuclein, gamma b (breast cancer-specific protein 1) [Source:ZFIN;Acc:ZDB-GENE-050522-235]
3. ATP6AP1L ATP6AP1L 164 2.778 0.819 1.000 - - - - - 0.959 -
4. evx2 ENSDARG00000059255 317 2.746 0.984 - - 0.773 - - 0.989 - - even-skipped homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-980526-215]
5. nxph1 ENSDARG00000033447 182 2.64 - 0.946 - - - 0.880 0.814 - - neurexophilin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-231]
6. atl1 ENSDARG00000060481 251 2.611 - 1.000 - - - 0.892 0.719 - - atlastin GTPase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8003]
7. KCNAB2 KCNAB2 129 2.597 0.898 - - - - 0.770 - 0.929 -
8. cbln1 ENSDARG00000057296 165 2.592 0.961 - - - - 0.888 0.743 - - cerebellin 1 precursor [Source:ZFIN;Acc:ZDB-GENE-040718-226]
9. nrxn2a ENSDARG00000061454 291 2.563 0.937 - - - - 0.780 0.846 - - neurexin 2a [Source:ZFIN;Acc:ZDB-GENE-070206-5]
10. ndrg4 ENSDARG00000103937 1234 2.558 0.969 - - - - 0.717 0.872 - - NDRG family member 4 [Source:ZFIN;Acc:ZDB-GENE-060512-226]
11. xkr6 xkr6 286 2.558 - 0.714 - - - 0.865 0.979 - -
12. LINGO2 LINGO2 300 2.556 - - - - - 0.903 0.785 0.868 -
13. BX470131.1 BX470131.1 86 2.55 0.896 - - - - 0.826 0.828 - -
14. gabrb3 ENSDARG00000023771, ENSDARG00000114822 180 2.548 0.915 - - - - 0.760 0.873 - - gamma-aminobutyric acid (GABA) A receptor, beta 3 [Source:ZFIN;Acc:ZDB-GENE-101102-2]
15. sept5b ENSDARG00000036031 188 2.547 0.740 1.000 - - - 0.807 - - - septin 5b [Source:ZFIN;Acc:ZDB-GENE-040808-43]
16. CABZ01065506.1 CABZ01065506.1 204 2.541 0.896 - - - - 0.847 0.798 - -
17. RAPGEF4 ENSDARG00000079872 82 2.534 0.811 - 0.780 - - - - 0.943 - Rap guanine nucleotide exchange factor (GEF) 4 [Source:ZFIN;Acc:ZDB-GENE-070912-385]
18. si:ch211-11c15.3 si:ch211-11c15.3 1279 2.527 0.858 - - - - 0.794 0.875 - -
19. syt9a ENSDARG00000003994 298 2.512 0.843 - - - - 0.906 0.763 - - synaptotagmin IXa [Source:ZFIN;Acc:ZDB-GENE-031002-18]
20. slc6a5_1 ENSDARG00000067964, ENSDARG00000111378 1111 2.503 0.851 - - - - 0.755 0.897 - - solute carrier family 6 (neurotransmitter transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-050105-2]
21. TUSC5 TUSC5 1436 2.49 0.734 - - - - 0.845 0.911 - -
22. stmn2a ENSDARG00000033234 2272 2.487 0.821 - - - - 0.835 0.831 - - stathmin 2a [Source:ZFIN;Acc:ZDB-GENE-041010-85]
23. MAP1A MAP1A 847 2.485 0.883 - - - - 0.720 0.882 - -
24. phyhipla ENSDARG00000003998, ENSDARG00000115785 262 2.473 0.905 - - - - 0.833 0.735 - - phytanoyl-CoA 2-hydroxylase interacting protein-like a [Source:ZFIN;Acc:ZDB-GENE-061215-64]
25. fez1 ENSDARG00000023174 701 2.468 0.857 - - - - 0.722 0.889 - - fasciculation and elongation protein zeta 1 (zygin I) [Source:ZFIN;Acc:ZDB-GENE-040426-2723]
26. C21H5orf24 C21H5orf24 333 2.457 0.854 - - - - - 0.903 0.700 -
27. cadm3 ENSDARG00000057013 1545 2.442 0.820 - - - - 0.713 0.909 - - cell adhesion molecule 3 [Source:ZFIN;Acc:ZDB-GENE-060512-196]
28. syt13 ENSDARG00000012306 298 2.429 0.722 - - - - 0.871 0.836 - - synaptotagmin XIII [Source:ZFIN;Acc:ZDB-GENE-050417-135]
29. scdb ENSDARG00000030265 271 2.418 0.855 - - - - 0.837 - 0.726 - stearoyl-CoA desaturase b [Source:ZFIN;Acc:ZDB-GENE-050522-12]
30. SV2B SV2B 208 2.417 0.793 - - - - 0.742 0.882 - -
31. jagn1a ENSDARG00000041071, ENSDARG00000109427 397 2.39 0.886 - - - - 0.795 0.709 - - jagunal homolog 1a [Source:ZFIN;Acc:ZDB-GENE-041010-80]
32. pax3a ENSDARG00000010192 626 2.389 - - - - - 0.831 0.722 0.836 - paired box 3a [Source:ZFIN;Acc:ZDB-GENE-980526-52]
33. olfm1b ENSDARG00000014053 1392 2.366 0.800 - - - - 0.742 0.824 - - olfactomedin 1b [Source:ZFIN;Acc:ZDB-GENE-040801-228]
34. dpysl4 ENSDARG00000103490 534 2.362 0.736 - - - - 0.867 0.759 - - dihydropyrimidinase-like 4 [Source:ZFIN;Acc:ZDB-GENE-050720-3]
35. lhx5 ENSDARG00000057936 785 2.358 0.729 - - - - 0.831 0.798 - - LIM homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-484]
36. hpca ENSDARG00000018397, ENSDARG00000110115 3866 2.356 0.758 - - - - 0.894 0.704 - - hippocalcin [Source:ZFIN;Acc:ZDB-GENE-040426-1683]
37. BX957337.1 BX957337.1 1685 2.336 0.704 - - - - 0.803 0.829 - -
38. stmn2b ENSDARG00000070537 1586 2.323 0.824 - - - - 0.705 0.794 - - stathmin 2b [Source:ZFIN;Acc:ZDB-GENE-050522-207]
39. si:ch211-152f6.6 si:ch211-152f6.6 278 2.32 0.719 - - - - - 0.799 0.802 -
40. pcsk1nl ENSDARG00000076170 1232 2.308 0.772 - - - - 0.826 0.710 - - proprotein convertase subtilisin/kexin type 1 inhibitor, like [Source:ZFIN;Acc:ZDB-GENE-090427-2]
41. RPH3A RPH3A 309 2.29 - - - - - 0.703 0.885 0.702 -
42. BSN BSN 463 2.288 0.755 0.781 - - - - 0.752 - -
43. gap43 ENSDARG00000099744 4114 2.181 0.736 - - - - 0.721 0.724 - - growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
44. LPHN2_1 LPHN2_1 3 2 - 1.000 - - - - 1.000 - -
45. VOPP1_1 VOPP1_1 73 2 - 1.000 - - - - 1.000 - -
46. ntsr1 ENSDARG00000077577, ENSDARG00000112950 14 2 - 1.000 - - - - 1.000 - - neurotensin receptor 1 (high affinity) [Source:ZFIN;Acc:ZDB-GENE-090313-372]
47. si:dkey-53f14.2 si:dkey-53f14.2 4 2 - 1.000 - - - - 1.000 - -
48. CR848025.1 ENSDARG00000100501 35 2 - 1.000 - - - - 1.000 - - si:dkey-202l22.4 [Source:NCBI gene;Acc:101882714]
49. CT573248.1 ENSDARG00000074029 10 2 - 1.000 - - - - 1.000 - -
50. si:ch211-204a13.1 si:ch211-204a13.1 6 2 - 1.000 - - - - 1.000 - -
51. adcyap1a ENSDARG00000004015 67 1.994 0.994 - - - - - 1.000 - - adenylate cyclase activating polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-020809-4]
52. mir124-6 64 1.984 0.984 - - - - - 1.000 - - microRNA 124-6
53. necab2 ENSDARG00000056745, ENSDARG00000110976 304 1.959 - 1.000 - - - - 0.959 - - N-terminal EF-hand calcium binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-050706-167]
54. adgra1a ENSDARG00000054177 19 1.955 0.955 - - - - - 1.000 - - adhesion G protein-coupled receptor A1a [Source:ZFIN;Acc:ZDB-GENE-130603-101]
55. GRIK5 ENSDARG00000101449, ENSDARG00000111384 43 1.942 - - - - - - 1.000 0.942 - glutamate receptor, ionotropic, kainate 5 [Source:ZFIN;Acc:ZDB-GENE-070821-6]
56. SGIP1 SGIP1 236 1.918 - - - - - 0.944 0.974 - -
57. fgf18b ENSDARG00000043962, ENSDARG00000112937 29 1.917 - - - - - 0.917 1.000 - - fibroblast growth factor 18b [Source:ZFIN;Acc:ZDB-GENE-050221-4]
58. NETO2 121 1.915 - 1.000 - - - - - 0.915 - neuropilin and tolloid like 2, transcript variant X2
59. nrg2b ENSDARG00000086585 100 1.914 0.914 - - - - - 1.000 - - neuregulin 2b [Source:ZFIN;Acc:ZDB-GENE-090205-2]
60. entpd3 ENSDARG00000035309 263 1.904 - - - - - 0.904 1.000 - - ectonucleoside triphosphate diphosphohydrolase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6186]
61. zgc:153845 62 1.902 - - - - - 0.902 1.000 - - zgc:153845
62. SKOR2 SKOR2 1041 1.899 0.979 - - - - - 0.920 - -
63. xkr8.1 ENSDARG00000004498 18 1.896 0.896 - - - - - 1.000 - - XK, Kell blood group complex subunit-related family, member 8, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-110106-1]
64. CABZ01084273.1 CABZ01084273.1 16 1.896 0.896 - - - - - 1.000 - -
65. si:dkey-266f7.10 ENSDARG00000086613 7 1.896 0.896 - - - - - 1.000 - - si:dkey-266f7.10 [Source:ZFIN;Acc:ZDB-GENE-120215-242]
66. soga3a ENSDARG00000063311, ENSDARG00000088571, ENSDARG00000097245 11 1.896 0.896 1.000 - - - - - - - SOGA family member 3a [Source:ZFIN;Acc:ZDB-GENE-100921-84]
67. grik4 ENSDARG00000026753 22 1.891 - - - - - 0.891 1.000 - - glutamate receptor, ionotropic, kainate 4 [Source:ZFIN;Acc:ZDB-GENE-070821-5]
68. lgi3 ENSDARG00000041358 46 1.883 - 1.000 - - - 0.883 - - - leucine-rich repeat LGI family, member 3 [Source:ZFIN;Acc:ZDB-GENE-060217-4]
69. tnni2a.3 ENSDARG00000013752 15 1.876 - 1.000 0.876 - - - - - - troponin I type 2a (skeletal, fast), tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-040718-80]
70. pnoca ENSDARG00000025024 467 1.862 - - - - - 0.896 0.966 - - prepronociceptin a [Source:ZFIN;Acc:ZDB-GENE-101229-1]
71. hs3st3l ENSDARG00000059903 184 1.861 0.958 - - - - 0.903 - - - heparan sulfate (glucosamine) 3-O-sulfotransferase 3-like [Source:ZFIN;Acc:ZDB-GENE-070202-6]
72. kctd16a ENSDARG00000004648, ENSDARG00000114292, ENSDARG00000117199 80 1.859 0.999 - - - - 0.860 - - - potassium channel tetramerization domain containing 16a [Source:ZFIN;Acc:ZDB-GENE-060117-1]
73. CAMK1 CAMK1 28 1.856 - - - - - 0.856 1.000 - -
74. si:dkey-193c22.1 ENSDARG00000093687 104 1.854 0.854 - - - - - 1.000 - - si:dkey-193c22.1 [Source:ZFIN;Acc:ZDB-GENE-030131-7957]
75. st6galnac5a ENSDARG00000039220 76 1.851 - - - - - 0.902 0.949 - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5a [Source:ZFIN;Acc:ZDB-GENE-070705-488]
76. si:dkey-163m14.10 si:dkey-163m14.10 33 1.846 - 1.000 - - - 0.846 - - -
77. CNTNAP1 ENSDARG00000074524 73 1.839 - - - - - 0.864 0.975 - - contactin associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030916-2]
78. SSBP2 ENSDARG00000099727 22 1.834 - - - - - 0.834 1.000 - - single-stranded DNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-090312-197]
79. CR377211.1 ENSDARG00000079364 24 1.834 - 1.000 - - - 0.834 - - - olfactory receptor 2T2-like [Source:NCBI gene;Acc:103910036]
80. CABZ01029822.1 ENSDARG00000086931 1654 1.831 0.984 - - - - - 0.847 - - uncharacterized LOC100004582 [Source:NCBI gene;Acc:100004582]
81. BEGAIN BEGAIN 39 1.83 0.896 - - - - - - 0.934 -
82. zgc:113307 ENSDARG00000044894 17 1.823 0.896 - - - - 0.927 - - - zgc:113307 [Source:ZFIN;Acc:ZDB-GENE-050522-29]
83. si:dkey-245p14.4 ENSDARG00000070320 418 1.822 0.914 - - - - 0.908 - - - si:dkey-245p14.4 [Source:ZFIN;Acc:ZDB-GENE-061207-63]
84. kcnd1 ENSDARG00000074746 153 1.817 0.842 - - - - - 0.975 - - potassium voltage-gated channel, Shal-related subfamily, member 1 [Source:ZFIN;Acc:ZDB-GENE-081105-40]
85. st6gal1 ENSDARG00000044514 142 1.816 0.907 - - - - 0.909 - - - ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 [Source:ZFIN;Acc:ZDB-GENE-060322-3]
86. neto1 ENSDARG00000068483 13 1.813 - - - - - 0.813 1.000 - - neuropilin (NRP) and tolloid (TLL)-like 1 [Source:ZFIN;Acc:ZDB-GENE-070912-592]
87. her3 ENSDARG00000076857 131 1.807 - - - - - 0.807 1.000 - - hairy-related 3 [Source:ZFIN;Acc:ZDB-GENE-980526-204]
88. lingo1a ENSDARG00000034165 179 1.804 - - - - - 0.840 0.964 - - leucine rich repeat and Ig domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-080327-16]
89. atpv0e2 ENSDARG00000059057 585 1.803 0.899 - - - - 0.904 - - - ATPase H+ transporting V0 subunit e2 [Source:ZFIN;Acc:ZDB-GENE-050522-135]
90. ksr2 ENSDARG00000094526 134 1.802 - - - - - 0.898 - 0.904 - kinase suppressor of ras 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8047]
91. TPPP2 ENSDARG00000035338, ENSDARG00000113727 298 1.8 - - - - - 0.906 0.894 - - tubulin polymerization-promoting protein family member 2 [Source:ZFIN;Acc:ZDB-GENE-140106-24]
92. rad21b ENSDARG00000035655 87 1.796 - - - - - 0.864 - 0.932 - RAD21 cohesin complex component b [Source:ZFIN;Acc:ZDB-GENE-060503-223]
93. PMFBP1 ENSDARG00000101917 292 1.795 - - - - - 0.923 - 0.872 - polyamine modulated factor 1 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-131127-619]
94. CR524483.1 ENSDARG00000109248 86 1.795 0.896 - - - - - 0.899 - - si:dkey-151p21.7 [Source:NCBI gene;Acc:562936]
95. otpa ENSDARG00000014201 2290 1.787 - - - - - 0.819 0.968 - - orthopedia homeobox a [Source:ZFIN;Acc:ZDB-GENE-070216-1]
96. gpr173 ENSDARG00000042922 238 1.787 0.787 - - - - - 1.000 - - G protein-coupled receptor 173 [Source:ZFIN;Acc:ZDB-GENE-000710-1]
97. scrt1b ENSDARG00000040214, ENSDARG00000110984 533 1.787 - - - - - 0.827 0.960 - - scratch family zinc finger 1b [Source:ZFIN;Acc:ZDB-GENE-050327-72]
98. atcaya ENSDARG00000071678 344 1.786 - - - - - 0.873 0.913 - - ataxia, cerebellar, Cayman type a [Source:ZFIN;Acc:ZDB-GENE-070705-185]
99. BX957322.2 ENSDARG00000095302 68 1.786 0.984 - 0.802 - - - - - -
100. TTBK1_1 TTBK1_1 132 1.785 - 0.903 - - - 0.882 - - -

There are 2736 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA