Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for slc18b1

Gene Name Gene ID Reads Annotation
slc18b1 ENSDARG00000044047 7 solute carrier family 18, subfamily B, member 1 [Source:ZFIN;Acc:ZDB-GENE-050417-386]










Genes with expression patterns similar to slc18b1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. slc18b1 ENSDARG00000044047 7 6 - 1.000 1.000 - 1.000 - 1.000 1.000 1.000 solute carrier family 18, subfamily B, member 1 [Source:ZFIN;Acc:ZDB-GENE-050417-386]
2. lgals3bpa ENSDARG00000037805 2 2 - 1.000 - - 1.000 - - - - lectin, galactoside-binding, soluble, 3 binding protein a [Source:ZFIN;Acc:ZDB-GENE-060331-57]
3. si:dkey-70b24.7 si:dkey-70b24.7 5 2 - 1.000 - - - - - - 1.000
4. C24H8orf34 C24H8orf34 1 2 - 1.000 - - - - 1.000 - -
5. TNS3_1 TNS3_1 8 2 - 1.000 - - - - 1.000 - -
6. BRPF1 ENSDARG00000103665 10 2 - 1.000 - - 1.000 - - - - bromodomain and PHD finger containing, 1 [Source:ZFIN;Acc:ZDB-GENE-040426-731]
7. BX000442.2 BX000442.2 8 1.95 - - 0.950 - 1.000 - - - -
8. sorl1 ENSDARG00000013892 13 1.941 - - 0.966 - 0.975 - - - - sortilin-related receptor, L(DLR class) A repeats containing [Source:ZFIN;Acc:ZDB-GENE-050208-22]
9. CU655961.3 ENSDARG00000106724 14 1.926 - 1.000 0.926 - - - - - -
10. CABZ01112331.1 CABZ01112331.1 9 1.908 - 1.000 - - 0.908 - - - -
11. CABZ01088930.1 CABZ01088930.1 20 1.827 - - 0.915 - - - 0.912 - -
12. PEG3_19 PEG3_19 29 1.798 - 1.000 - - - - 0.798 - -
13. si:dkey-24p1.7 ENSDARG00000089404 7 1.786 - - 0.942 - 0.844 - - - - si:dkey-24p1.7 [Source:ZFIN;Acc:ZDB-GENE-121214-215]
14. purg ENSDARG00000099187, ENSDARG00000114450 33 1.729 - 0.729 - - - - 1.000 - - purine-rich element binding protein G [Source:ZFIN;Acc:ZDB-GENE-070702-3]
15. CR383676.3_2 CR383676.3_2 9 1.715 - 0.917 - - - - 0.798 - -
16. crygs1 ENSDARG00000042992 45 1.712 - 0.712 - - 1.000 - - - - crystallin, gamma S1 [Source:ZFIN;Acc:ZDB-GENE-050223-4]
17. cdhr1a ENSDARG00000004643 7 1.694 - - - - - - - 0.710 0.984 cadherin-related family member 1a [Source:ZFIN;Acc:ZDB-GENE-040924-4]
18. si:ch211-225p5.3 si:ch211-225p5.3 10 1.672 - 0.729 - - - - 0.943 - -
19. ZC2HC1C ENSDARG00000070526 14 1.664 - 0.721 0.943 - - - - - - zinc finger, C2HC-type containing 1C [Source:ZFIN;Acc:ZDB-GENE-111020-1]
20. si:dkey-76d14.2 ENSDARG00000093458 11 1.661 - - - - - - 0.779 - 0.882 si:dkey-76d14.2 [Source:ZFIN;Acc:ZDB-GENE-070912-580]
21. mir451a 131 1.553 - - 0.736 - - - 0.817 - - microRNA 451a
22. dnah11 ENSDARG00000077384, ENSDARG00000094282 15 1.491 - 0.712 - - - - 0.779 - - dynein, axonemal, heavy chain 11 [Source:ZFIN;Acc:ZDB-GENE-100922-8]
23. si:ch73-59c19.1 ENSDARG00000091909 64 1 - 1.000 - - - - - - - si:ch73-59c19.1 [Source:ZFIN;Acc:ZDB-GENE-100922-247]
24. wibg wibg 2 1 - - - - 1.000 - - - -
25. UNC80 ENSDARG00000098290 2 1 - - - - 1.000 - - - - unc-80 homolog (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-140106-167]
26. SNORA63 SNORA63 7 1 - - - - - - 1.000 - -
27. HTRA2_6 HTRA2_6 0 1 - - - - - - 1.000 - -
28. fam219b ENSDARG00000104637 3 1 - - - - - - 1.000 - - family with sequence similarity 219, member B [Source:ZFIN;Acc:ZDB-GENE-050327-82]
29. chia.3 ENSDARG00000009612 14 1 - 1.000 - - - - - - - chitinase, acidic.3 [Source:ZFIN;Acc:ZDB-GENE-040426-2891]
30. cacng3a ENSDARG00000058460 2 1 - - - - 1.000 - - - - calcium channel, voltage-dependent, gamma subunit 3a [Source:ZFIN;Acc:ZDB-GENE-090312-124]
31. zgc:66455 ENSDARG00000052375 3 1 - - - - - - 1.000 - - zgc:66455 [Source:ZFIN;Acc:ZDB-GENE-040426-1642]
32. rmnd1 ENSDARG00000027465 116 1 - 1.000 - - - - - - - required for meiotic nuclear division 1 homolog [Source:ZFIN;Acc:ZDB-GENE-050522-21]
33. si:ch211-281p14.2 22 1 - 1.000 - - - - - - - si:ch211-281p14.2, transcript variant X2
34. CABZ01054394.1 ENSDARG00000090942 12 1 - 1.000 - - - - - - - gastrula zinc finger protein XlCGF26.1-like [Source:NCBI gene;Acc:101885996]
35. CU469532.1 CU469532.1 31 1 - - - - - - 1.000 - -
36. C8H1orf173 C8H1orf173 10 1 - 1.000 - - - - - - -
37. glra4b ENSDARG00000058103 0 1 - 1.000 - - - - - - - glycine receptor, alpha 4b [Source:ZFIN;Acc:ZDB-GENE-020402-2]
38. si:ch211-268b13.3 si:ch211-268b13.3 28 1 - 1.000 - - - - - - -
39. si:dkey-11f14.2 si:dkey-11f14.2 2 1 - 1.000 - - - - - - -
40. fam213ab 1 1 - 1.000 - - - - - - - family with sequence similarity 213, member Ab
41. prkcba ENSDARG00000008723, ENSDARG00000116813 30 1 - 1.000 - - - - - - - protein kinase C, beta a [Source:ZFIN;Acc:ZDB-GENE-040426-1354]
42. MOB2 MOB2 4 1 - - - - 1.000 - - - -
43. si:ch211-218h8.1 ENSDARG00000091026 0 1 - 1.000 - - - - - - - si:ch211-218h8.1 [Source:ZFIN;Acc:ZDB-GENE-081103-16]
44. CABZ01080434.1 ENSDARG00000102438 4 1 - - - - - - 1.000 - -
45. si:ch211-262h13.4 si:ch211-262h13.4 3 1 - 1.000 - - - - - - -
46. ENSDARG00000091099 ENSDARG00000091099 5 1 - - - - - - 1.000 - -
47. RAB3IL1 ENSDARG00000007711 11 1 - - - - - - 1.000 - - RAB3A interacting protein (rabin3)-like 1 [Source:ZFIN;Acc:ZDB-GENE-110921-5]
48. vax2 ENSDARG00000058702 175 1 - 1.000 - - - - - - - ventral anterior homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-030904-8]
49. GABRR3 GABRR3 3 1 - - - - 1.000 - - - -
50. si:ch1073-464p5.5 ENSDARG00000079544 5 1 - 1.000 - - - - - - - si:ch1073-464p5.5 [Source:ZFIN;Acc:ZDB-GENE-091116-35]
51. slc43a3a ENSDARG00000059682 27 1 - 1.000 - - - - - - - solute carrier family 43, member 3a [Source:ZFIN;Acc:ZDB-GENE-110208-8]
52. cthrc1b ENSDARG00000001971 44 1 - - - - - - 1.000 - - collagen triple helix repeat containing 1b [Source:ZFIN;Acc:ZDB-GENE-050420-46]
53. ankrd45 ENSDARG00000011326 62 1 - 1.000 - - - - - - - ankyrin repeat domain 45 [Source:ZFIN;Acc:ZDB-GENE-050522-311]
54. si:ch73-289h5.1 si:ch73-289h5.1 2 1 - 1.000 - - - - - - -
55. BX548047.2 ENSDARG00000115500 17 1 - 1.000 - - - - - - -
56. AL844567.1_1 AL844567.1_1 34 1 - 1.000 - - - - - - -
57. si:dkey-169l5.3 si:dkey-169l5.3 239 1 - 1.000 - - - - - - -
58. mir10b-2 116 1 - - - - - - 1.000 - - microRNA 10b-2
59. mir21-2 18 1 - 1.000 - - - - - - - microRNA 21-2
60. matn3a ENSDARG00000069245 2410 1 - 1.000 - - - - - - - matrilin 3a [Source:ZFIN;Acc:ZDB-GENE-040822-21]
61. si:dkey-250k10.3 si:dkey-250k10.3 2 1 - - - - 1.000 - - - -
62. CABZ01117437.1 CABZ01117437.1 11 1 - 1.000 - - - - - - -
63. si:ch73-116o1.3 si:ch73-116o1.3 1 1 - - - - 1.000 - - - -
64. btr16 ENSDARG00000028850 21 1 - - - - - - - - 1.000 bloodthirsty-related gene family, member 16 [Source:ZFIN;Acc:ZDB-GENE-060929-1066]
65. ppm1f ENSDARG00000005786, ENSDARG00000109839 25 1 - - - - - - 1.000 - - protein phosphatase, Mg2+/Mn2+ dependent, 1F [Source:ZFIN;Acc:ZDB-GENE-051128-2]
66. CABZ01030033.1 ENSDARG00000117613 3 1 - - - - - - 1.000 - -
67. BX323793.2 BX323793.2 61 1 - 1.000 - - - - - - -
68. U11 U11 11 1 - 1.000 - - - - - - -
69. creb5b ENSDARG00000070536 9 1 - - - - 1.000 - - - - cAMP responsive element binding protein 5b [Source:ZFIN;Acc:ZDB-GENE-091020-6]
70. U2_2 U2_2 2 1 - - - - - - - - 1.000
71. CR759816.1 ENSDARG00000098977 27 1 - 1.000 - - - - - - -
72. si:ch211-162i8.2 ENSDARG00000096041 4 1 - 1.000 - - - - - - - si:ch211-162i8.2 [Source:ZFIN;Acc:ZDB-GENE-110913-56]
73. si:dkey-6a5.10 si:dkey-6a5.10 17 1 - 1.000 - - - - - - -
74. DLK1 60 1 - 1.000 - - - - - - - delta like non-canonical Notch ligand 1
75. si:ch73-180n10.1 ENSDARG00000088794 1 1 - - - - - - - - 1.000 si:ch73-180n10.1 [Source:ZFIN;Acc:ZDB-GENE-130603-83]
76. slc2a5 ENSDARG00000077875 5 1 - 1.000 - - - - - - - solute carrier family 2 (facilitated glucose/fructose transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-060222-2]
77. OVGP1 ENSDARG00000075745 6 1 - - - - 1.000 - - - - oviductal glycoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-140106-118]
78. si:ch211-186e20.2 ENSDARG00000074712 0 1 - 1.000 - - - - - - - si:ch211-186e20.2 [Source:ZFIN;Acc:ZDB-GENE-110407-8]
79. sdhda ENSDARG00000055712 50 1 - 1.000 - - - - - - - succinate dehydrogenase complex, subunit D, integral membrane protein a [Source:ZFIN;Acc:ZDB-GENE-040718-192]
80. DBNDD1 DBNDD1 43 1 - 1.000 - - - - - - -
81. pvalb6 ENSDARG00000009311, ENSDARG00000113947 248 1 - 1.000 - - - - - - - parvalbumin 6 [Source:ZFIN;Acc:ZDB-GENE-040912-95]
82. si:ch73-60g14.2 si:ch73-60g14.2 1 1 - - - - 1.000 - - - -
83. fgf9 ENSDARG00000078625 2 1 - 1.000 - - - - - - - fibroblast growth factor 9 [Source:ZFIN;Acc:ZDB-GENE-070424-238]
84. CDCP1 ENSDARG00000110186 0 1 - 1.000 - - - - - - - CUB domain containing protein 1 [Source:HGNC Symbol;Acc:HGNC:24357]
85. CABZ01090975.1 CABZ01090975.1 9 1 - - - - - - 1.000 - -
86. MSH4 ENSDARG00000075826 37 1 - 1.000 - - - - - - - mutS homolog 4 [Source:ZFIN;Acc:ZDB-GENE-131121-643]
87. TRIM35_3 TRIM35_3 172 1 - - - - - - 1.000 - -
88. U6_11 U6_11 0 1 - 1.000 - - - - - - -
89. si:dkey-79f11.1 si:dkey-79f11.1 91 1 - 1.000 - - - - - - -
90. BX569789.5 BX569789.5 0 1 - - - - 1.000 - - - -
91. CR942805.1 CR942805.1 94 1 - - - - - - 1.000 - -
92. F13A1 F13A1 1 1 - - - - 1.000 - - - -
93. CU861664.1 CU861664.1 53 1 - - - - - - 1.000 - -
94. si:dkey-9c18.1 si:dkey-9c18.1 3 1 - - - - 1.000 - - - -
95. Metazoa_SRP_3 Metazoa_SRP_3 0 1 - - - - 1.000 - - - -
96. CU694319.1 CU694319.1 72 1 - 1.000 - - - - - - -
97. BX005421.4 BX005421.4 11 1 - - - - 1.000 - - - -
98. rcv1 rcv1 77 1 - 1.000 - - - - - - -
99. trim35-3_1 ENSDARG00000052255 6 1 - 1.000 - - - - - - - tripartite motif containing 35-3 [Source:ZFIN;Acc:ZDB-GENE-070912-56]
100. cabp2a ENSDARG00000052016 19 1 - 1.000 - - - - - - - calcium binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-050913-25]

There are 812 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA