Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for slc18a3a

Gene Name Gene ID Reads Annotation
slc18a3a ENSDARG00000006356 1285 solute carrier family 18 (vesicular acetylcholine transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-060929-990]










Genes with expression patterns similar to slc18a3a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. slc18a3a ENSDARG00000006356 1285 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 solute carrier family 18 (vesicular acetylcholine transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-060929-990]
2. gad2 ENSDARG00000015537 724 4.264 0.804 0.897 - - 0.924 0.823 0.816 - - glutamate decarboxylase 2 [Source:ZFIN;Acc:ZDB-GENE-030909-9]
3. rfx4 ENSDARG00000026395, ENSDARG00000116861 2047 4.145 0.720 0.815 - - 0.862 0.898 0.850 - - regulatory factor X, 4 [Source:ZFIN;Acc:ZDB-GENE-040909-2]
4. nadl1.1 1200 3.759 0.852 0.983 - - - 0.946 0.978 - - neural adhesion molecule L1.1, transcript variant X1
5. nova2 ENSDARG00000017673 7685 3.719 0.873 0.873 - - - 0.984 0.989 - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
6. onecut1 ENSDARG00000007982, ENSDARG00000112251 6307 3.711 0.913 0.836 - - - 0.978 0.984 - - one cut homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1469]
7. neurog1 ENSDARG00000056130 3924 3.71 0.850 0.908 - - - 0.958 0.994 - - neurogenin 1 [Source:ZFIN;Acc:ZDB-GENE-990415-174]
8. stx1b ENSDARG00000000503 2724 3.697 0.862 0.909 - - - 0.947 0.979 - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
9. myt1b ENSDARG00000102879 5411 3.686 0.897 0.860 - - - 0.963 0.966 - - myelin transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-090313-67]
10. nes ENSDARG00000088805 2710 3.678 0.833 0.904 - - - 0.962 0.979 - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
11. mir10d-1 mir10d-1 860 3.653 0.841 0.968 - - - 0.898 0.946 - -
12. CU928222.1 ENSDARG00000097436 1662 3.619 0.860 0.889 - - - 0.906 0.964 - -
13. si:ch73-21g5.7 ENSDARG00000093156 9412 3.617 0.950 0.851 - - - 0.821 0.995 - - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
14. BX957337.1 BX957337.1 1685 3.607 0.893 0.870 - - - 0.878 0.966 - -
15. pcdh1gc5 ENSDARG00000104826 10052 3.602 0.821 0.880 - - - 0.913 0.988 - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
16. calca ENSDARG00000056590 150 3.599 0.806 0.971 - - - 0.836 0.986 - - calcitonin/calcitonin-related polypeptide, alpha [Source:ZFIN;Acc:ZDB-GENE-040718-173]
17. pcsk1nl ENSDARG00000076170 1232 3.594 0.880 0.922 - - - 0.808 0.984 - - proprotein convertase subtilisin/kexin type 1 inhibitor, like [Source:ZFIN;Acc:ZDB-GENE-090427-2]
18. SNAP91 ENSDARG00000098809 556 3.543 0.854 0.919 - - - 0.793 0.977 - - synaptosomal-associated protein 91 [Source:ZFIN;Acc:ZDB-GENE-100422-6]
19. SLC5A7 SLC5A7 453 3.54 0.794 0.963 - - - 0.799 0.984 - -
20. glrbb ENSDARG00000052769, ENSDARG00000113828 467 3.533 0.844 0.780 - - - 0.914 0.995 - - glycine receptor, beta b [Source:ZFIN;Acc:ZDB-GENE-040801-106]
21. CHL1 CHL1 1553 3.532 0.811 0.902 - - - 0.909 0.910 - -
22. pax6a ENSDARG00000103379 3061 3.504 0.786 0.823 - - - 0.949 0.946 - - paired box 6a [Source:ZFIN;Acc:ZDB-GENE-990415-200]
23. gng3 ENSDARG00000009553 2530 3.496 - 0.796 - - 0.917 0.796 0.987 - - guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]
24. nrarpb ENSDARG00000018958 6225 3.489 0.817 0.753 - - - 0.933 0.986 - - NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
25. scn8aa ENSDARG00000005775 792 3.467 0.708 0.908 - - - 0.915 0.936 - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
26. pou3f2b ENSDARG00000076262, ENSDARG00000112713 2439 3.454 0.759 0.810 - - - 0.930 0.955 - - POU class 3 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-370]
27. nrn1a ENSDARG00000071860 1311 3.448 - 0.738 - - 0.910 0.840 0.960 - - neuritin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-212]
28. syt11a ENSDARG00000057913 1145 3.445 0.834 0.790 - - - 0.846 0.975 - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
29. sox19b ENSDARG00000040266 532 3.445 0.794 0.839 - - - 0.867 0.945 - - SRY (sex determining region Y)-box 19b [Source:ZFIN;Acc:ZDB-GENE-010111-1]
30. myt1a ENSDARG00000074030, ENSDARG00000116035 2839 3.433 - 0.803 - - 0.713 0.955 0.962 - - myelin transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3885]
31. ctnnd2b ENSDARG00000003779 964 3.422 0.760 0.854 - - - 0.825 0.983 - - catenin (cadherin-associated protein), delta 2b [Source:ZFIN;Acc:ZDB-GENE-070912-532]
32. dbx2 2971 3.418 0.727 0.876 - - - 0.828 0.987 - - developing brain homeobox 2
33. dync1i1 ENSDARG00000060948 554 3.412 0.867 0.741 - - - 0.886 0.918 - - dynein, cytoplasmic 1, intermediate chain 1 [Source:ZFIN;Acc:ZDB-GENE-061215-62]
34. kcnc3a ENSDARG00000055855 1821 3.404 0.742 0.785 - - - 0.905 0.972 - - potassium voltage-gated channel, Shaw-related subfamily, member 3a [Source:ZFIN;Acc:ZDB-GENE-100901-1]
35. MAP1A MAP1A 847 3.39 0.705 0.873 - - - 0.890 0.922 - -
36. ADAMTS3 ENSDARG00000060127 2839 3.384 0.737 0.866 - - - 0.852 0.929 - - ADAM metallopeptidase with thrombospondin type 1 motif, 3 [Source:ZFIN;Acc:ZDB-GENE-110223-1]
37. fyna ENSDARG00000011370 1679 3.383 0.804 0.715 - - - 0.944 0.920 - - FYN proto-oncogene, Src family tyrosine kinase a [Source:ZFIN;Acc:ZDB-GENE-030903-5]
38. CR848045.1 CR848045.1 459 3.379 0.701 0.942 - - - 0.792 0.944 - -
39. ptprnb ENSDARG00000077047 2743 3.374 0.757 0.905 - - - 0.884 0.828 - - protein tyrosine phosphatase, receptor type, Nb [Source:ZFIN;Acc:ZDB-GENE-100505-1]
40. snap25a ENSDARG00000020609 4537 3.368 0.721 0.808 - - - 0.889 0.950 - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
41. slc1a2b ENSDARG00000102453 3136 3.349 0.709 0.826 - - - 0.865 0.949 - - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
42. slc35g2b ENSDARG00000045447 378 3.348 0.709 0.863 - - - 0.812 0.964 - - solute carrier family 35, member G2b [Source:ZFIN;Acc:ZDB-GENE-050320-142]
43. TUBB8P7_1 TUBB8P7_1 2722 3.337 0.762 0.731 - - - 0.879 0.965 - -
44. atp1b4 ENSDARG00000053262 1337 3.325 0.823 0.738 - - - 0.863 0.901 - - ATPase Na+/K+ transporting subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-070412-1]
45. ROBO3_1 ROBO3_1 468 3.313 0.766 0.764 - - - 0.820 0.963 - -
46. C8H1orf106 C8H1orf106 2690 3.305 0.754 0.731 - - - 0.899 0.921 - -
47. prdm8 ENSDARG00000025017 370 3.296 0.876 0.811 - - - 0.728 0.881 - - PR domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2747]
48. mb21d2a mb21d2a 421 3.288 0.734 0.806 - - - 0.836 0.912 - -
49. cldn5a ENSDARG00000043716 3865 3.276 0.701 0.775 - - - 0.865 0.935 - - claudin 5a [Source:ZFIN;Acc:ZDB-GENE-040426-2442]
50. scn2b ENSDARG00000101713 796 3.273 0.719 0.829 - - - 0.748 0.977 - - sodium channel, voltage-gated, type II, beta [Source:ZFIN;Acc:ZDB-GENE-070920-1]
51. wasf3 wasf3 3287 3.229 0.826 - - - 0.792 0.843 0.768 - -
52. SSX2IP SSX2IP 316 3.21 0.806 0.775 - - - 0.712 0.917 - -
53. rab39b rab39b 449 3.173 0.769 0.785 - - - 0.712 0.907 - -
54. st3gal2 ENSDARG00000112898 370 3.163 0.734 0.896 - - - 0.787 0.746 - - ST3 beta-galactoside alpha-2,3-sialyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050419-181]
55. cacng2b ENSDARG00000102376 213 3.116 0.891 0.796 - - - 0.700 0.729 - - calcium channel, voltage-dependent, gamma subunit 2b [Source:ZFIN;Acc:ZDB-GENE-090624-3]
56. si:ch211-152f6.6 si:ch211-152f6.6 278 3.064 0.722 0.716 - - - 0.770 0.856 - -
57. sox19a ENSDARG00000010770, ENSDARG00000110497 4683 2.813 0.844 - - - - 0.976 0.993 - - SRY (sex determining region Y)-box 19a [Source:ZFIN;Acc:ZDB-GENE-980526-102]
58. neurod4 ENSDARG00000003469, ENSDARG00000117149 1732 2.789 0.883 0.950 - - - - 0.956 - - neuronal differentiation 4 [Source:ZFIN;Acc:ZDB-GENE-030730-1]
59. gfap ENSDARG00000025301 5584 2.788 0.828 - - - - 0.968 0.992 - - glial fibrillary acidic protein [Source:ZFIN;Acc:ZDB-GENE-990914-3]
60. itm2ca ENSDARG00000043448 1265 2.787 - 0.872 - - - 0.933 0.982 - - integral membrane protein 2Ca [Source:ZFIN;Acc:ZDB-GENE-040718-284]
61. gpm6aa ENSDARG00000055455, ENSDARG00000110942 9156 2.77 0.860 0.920 - - - - 0.990 - - glycoprotein M6Aa [Source:ZFIN;Acc:ZDB-GENE-030710-7]
62. epha4b ENSDARG00000011600 3110 2.761 0.887 - - - - 0.921 0.953 - - eph receptor A4b [Source:ZFIN;Acc:ZDB-GENE-030826-6]
63. dla ENSDARG00000010791 9281 2.76 0.917 0.850 - - - - 0.993 - - deltaA [Source:ZFIN;Acc:ZDB-GENE-980526-29]
64. vim ENSDARG00000010008 3551 2.754 0.872 - - - - 0.976 0.906 - - vimentin [Source:ZFIN;Acc:ZDB-GENE-011212-3]
65. tuba1c ENSDARG00000055216 8384 2.754 0.833 - - - - 0.934 0.987 - - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
66. stxbp1a ENSDARG00000001994 5154 2.753 - 0.924 - - - 0.857 0.972 - - syntaxin binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050626-106]
67. chat chat 463 2.747 0.811 - - - - 0.943 0.993 - -
68. sox2 ENSDARG00000070913 2763 2.747 0.831 0.955 - - - - 0.961 - - SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
69. tmie ENSDARG00000069423 305 2.736 0.897 - - - - 0.867 0.972 - - transmembrane inner ear [Source:ZFIN;Acc:ZDB-GENE-061207-9]
70. SEMA7A ENSDARG00000078707 465 2.731 0.852 - - - - 0.929 0.950 - - semaphorin 7A [Source:ZFIN;Acc:ZDB-GENE-030131-3633]
71. map7d2a ENSDARG00000068480 513 2.723 0.887 - - - - 0.911 0.925 - - MAP7 domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-060526-150]
72. nat8l ENSDARG00000077256, ENSDARG00000115322 3513 2.718 0.820 - - - - 0.936 0.962 - - N-acetyltransferase 8-like [Source:ZFIN;Acc:ZDB-GENE-030729-4]
73. TUBA1A ENSDARG00000001889 25294 2.717 0.761 - - - - 0.968 0.988 - - tubulin, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090507-4]
74. scrt2 ENSDARG00000056175 4331 2.71 - 0.880 - - - 0.911 0.919 - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
75. si:ch211-278j3.3 ENSDARG00000020284 478 2.706 - - - - 0.914 0.887 0.905 - - si:ch211-278j3.3 [Source:ZFIN;Acc:ZDB-GENE-041014-147]
76. clstn1 ENSDARG00000031720 5286 2.706 0.907 - - - - 0.870 0.929 - - calsyntenin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1064]
77. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 2.704 0.829 - - - - 0.912 0.963 - - cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
78. cadm3 ENSDARG00000057013 1545 2.704 - 0.883 - - - 0.918 0.903 - - cell adhesion molecule 3 [Source:ZFIN;Acc:ZDB-GENE-060512-196]
79. EFCC1 ENSDARG00000077826 1359 2.703 0.877 - - - - 0.917 0.909 - - EF-hand and coiled-coil domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-120813-3]
80. AGO1 ENSDARG00000092644 4521 2.696 0.765 - - - - 0.967 0.964 - - argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]
81. sox21b ENSDARG00000008540 1460 2.696 0.861 0.846 - - - - 0.989 - - SRY (sex determining region Y)-box 21b [Source:ZFIN;Acc:ZDB-GENE-040429-1]
82. dbx1a ENSDARG00000086393 3161 2.689 - 0.867 - - - 0.937 0.885 - - developing brain homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-000128-8]
83. CLIP3 ENSDARG00000054456 734 2.688 0.834 0.913 - - - - 0.941 - - CAP-GLY domain containing linker protein 3 [Source:ZFIN;Acc:ZDB-GENE-131127-193]
84. atp6v0cb ENSDARG00000036577 3472 2.688 0.750 - - - - 0.948 0.990 - - ATPase H+ transporting V0 subunit cb [Source:ZFIN;Acc:ZDB-GENE-030131-4127]
85. sypa ENSDARG00000042974, ENSDARG00000110528 3217 2.687 0.826 - - - - 0.874 0.987 - - synaptophysin a [Source:ZFIN;Acc:ZDB-GENE-031104-2]
86. hmgb1b ENSDARG00000030479 10398 2.686 0.807 - - - - 0.938 0.941 - - high mobility group box 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8480]
87. LRRN3 LRRN3 261 2.681 0.733 0.961 - - - - 0.987 - -
88. CABZ01111990.1 CABZ01111990.1 4374 2.681 0.819 - - - - 0.887 0.975 - -
89. vgf ENSDARG00000105529 247 2.67 0.793 - - - - 0.913 0.964 - - VGF nerve growth factor inducible [Source:ZFIN;Acc:ZDB-GENE-121009-2]
90. st18 663 2.665 - 0.862 - - - 0.853 0.950 - - suppression of tumorigenicity 18, zinc finger
91. nell2b ENSDARG00000062797 854 2.664 0.730 - - - - 0.953 0.981 - - neural EGFL like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-8026]
92. cntn4 ENSDARG00000098161, ENSDARG00000109387 437 2.663 - 0.758 - - - 0.933 0.972 - - contactin 4 [Source:ZFIN;Acc:ZDB-GENE-060929-776]
93. cdh7 582 2.657 - 0.861 - - - 0.821 0.975 - - cadherin 7, type 2, transcript variant X1
94. cplx2l ENSDARG00000018997 3975 2.657 0.893 0.790 - - - - 0.974 - - complexin 2, like [Source:ZFIN;Acc:ZDB-GENE-040718-160]
95. plp1a ENSDARG00000103732 3544 2.656 0.788 - - - - 0.881 0.987 - - proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
96. eno2 ENSDARG00000014287 2162 2.65 0.838 - - - - 0.832 0.980 - - enolase 2 [Source:ZFIN;Acc:ZDB-GENE-040704-27]
97. mllt11 ENSDARG00000071026 2518 2.646 0.794 - - - - 0.909 0.943 - - MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
98. rap2ip rap2ip 681 2.646 - 0.781 - - - 0.898 0.967 - -
99. adam23a ENSDARG00000062323 580 2.643 - 0.868 - - - 0.826 0.949 - - ADAM metallopeptidase domain 23a [Source:ZFIN;Acc:ZDB-GENE-070810-2]
100. amph ENSDARG00000007663 599 2.64 - 0.829 - - - 0.857 0.954 - - amphiphysin [Source:ZFIN;Acc:ZDB-GENE-040426-1711]

There are 2265 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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