Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for slc13a1

Gene Name Gene ID Reads Annotation
slc13a1 ENSDARG00000045638, ENSDARG00000114835 13 solute carrier family 13 member 1 [Source:ZFIN;Acc:ZDB-GENE-031222-3]










Genes with expression patterns similar to slc13a1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. slc13a1 ENSDARG00000045638, ENSDARG00000114835 13 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 solute carrier family 13 member 1 [Source:ZFIN;Acc:ZDB-GENE-031222-3]
2. PCDH10 PCDH10 7 2.833 - 1.000 - 1.000 0.833 - - - -
3. EXD1 ENSDARG00000098669 27 2.729 - 0.941 - - - - 1.000 0.788 - exonuclease 3'-5' domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060825-267]
4. CCDC74B CCDC74B 8 2.572 - - - 0.731 - 0.841 1.000 - -
5. antxr2a ENSDARG00000104118, ENSDARG00000111517 12 2 - 1.000 - 1.000 - - - - - ANTXR cell adhesion molecule 2a [Source:ZFIN;Acc:ZDB-GENE-060526-14]
6. frmd4bb ENSDARG00000076496 18 2 - - 1.000 - - - 1.000 - - FERM domain containing 4Bb [Source:ZFIN;Acc:ZDB-GENE-100921-74]
7. igsf5 igsf5 85 2 - 1.000 - - - - 1.000 - -
8. tectb ENSDARG00000045268 3 2 - - 1.000 1.000 - - - - - tectorin beta [Source:ZFIN;Acc:ZDB-GENE-041212-16]
9. fam207a_1 ENSDARG00000071500 1 2 - - 1.000 - - - 1.000 - - family with sequence similarity 207, member A [Source:ZFIN;Acc:ZDB-GENE-060825-113]
10. trpm2 ENSDARG00000095696, ENSDARG00000101641 1 2 - - 1.000 1.000 - - - - - transient receptor potential cation channel, subfamily M, member 2 [Source:ZFIN;Acc:ZDB-GENE-061214-4]
11. si:dkey-14o6.7 si:dkey-14o6.7 9 2 - 1.000 - 1.000 - - - - -
12. si:dkey-30c15.9 si:dkey-30c15.9 4 2 - - 1.000 - - - 1.000 - -
13. si:dkey-111e8.4 ENSDARG00000093547, ENSDARG00000115133 1 2 - - 1.000 1.000 - - - - - si:dkey-111e8.4 [Source:ZFIN;Acc:ZDB-GENE-060526-191]
14. si:dkey-85k7.12 ENSDARG00000078731 3 1.916 - - 1.000 - 0.916 - - - - si:dkey-85k7.12 [Source:ZFIN;Acc:ZDB-GENE-130530-855]
15. HELZ2 ENSDARG00000012600 2 1.916 - - - - 0.916 - 1.000 - - helicase with zinc finger 2 [Source:HGNC Symbol;Acc:HGNC:30021]
16. hs3st4 ENSDARG00000052648 6 1.916 - - 1.000 - 0.916 - - - - heparan sulfate (glucosamine) 3-O-sulfotransferase 4 [Source:ZFIN;Acc:ZDB-GENE-070202-8]
17. si:ch211-197g15.5 si:ch211-197g15.5 10 1.879 - - - - 0.916 - - 0.963 -
18. slc30a2 ENSDARG00000021305 4 1.878 - - 1.000 - 0.878 - - - - solute carrier family 30 (zinc transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-041014-347]
19. si:rp71-1c10.11 ENSDARG00000096721 39 1.863 - - - - - 0.960 0.903 - - si:rp71-1c10.11 [Source:ZFIN;Acc:ZDB-GENE-130603-61]
20. supt3h ENSDARG00000098141 18 1.852 - 1.000 0.852 - - - - - - SPT3 homolog, SAGA and STAGA complex component [Source:ZFIN;Acc:ZDB-GENE-040718-370]
21. pou1f1 ENSDARG00000058924, ENSDARG00000110816, ENSDARG00000115109 17 1.849 - 1.000 - - 0.849 - - - - POU class 1 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040630-7]
22. MFAP4_7 MFAP4_7 43 1.841 - 1.000 - - - 0.841 - - -
23. traf1 ENSDARG00000069482 50 1.841 - 1.000 - - - 0.841 - - - TNF receptor-associated factor 1 [Source:ZFIN;Acc:ZDB-GENE-071120-4]
24. rpap3 ENSDARG00000087962 22 1.841 - - - 1.000 - 0.841 - - - RNA polymerase II associated protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-928]
25. lama3 ENSDARG00000071462 1 1.841 - 1.000 - - - 0.841 - - - laminin, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-050208-475]
26. si:ch211-157l15.4 si:ch211-157l15.4 92 1.841 - 1.000 - - - 0.841 - - -
27. si:ch211-188i4.4 5 1.817 - 1.000 - 0.817 - - - - - si:ch211-188i4.4, transcript variant X3
28. si:ch211-198c19.2 si:ch211-198c19.2 165 1.793 - 1.000 - - - - 0.793 - -
29. si:ch211-53m15.1 si:ch211-53m15.1 28 1.786 - - 1.000 - - - - - 0.786
30. si:ch211-14a17.6 ENSDARG00000054313, ENSDARG00000116347 12 1.783 - - 1.000 - 0.783 - - - - si:ch211-14a17.6 [Source:ZFIN;Acc:ZDB-GENE-030616-589]
31. si:dkey-71h2.2 ENSDARG00000043394 11 1.777 - 1.000 0.777 - - - - - - si:dkey-71h2.2 [Source:ZFIN;Acc:ZDB-GENE-041014-145]
32. PEG3_27 PEG3_27 10 1.774 - - - 0.957 0.817 - - - -
33. fam43b ENSDARG00000070222 92 1.766 - 1.000 - - - - 0.766 - - family with sequence similarity 43, member B [Source:ZFIN;Acc:ZDB-GENE-040912-11]
34. GRIN2B GRIN2B 140 1.766 - 1.000 - - - - 0.766 - -
35. cdh18 cdh18 64 1.764 - 1.000 - - 0.764 - - - -
36. GPR82 GPR82 127 1.757 - - - - 0.916 0.841 - - -
37. PEG3_35 PEG3_35 52 1.743 - - - - - - 1.000 0.743 -
38. si:ch1073-219n12.1 71 1.742 - - - 1.000 - - 0.742 - - si:ch1073-219n12.1, transcript variant X1
39. slc4a11 ENSDARG00000075532, ENSDARG00000115789 20 1.74 - - - - - 0.740 1.000 - - solute carrier family 4, sodium borate transporter, member 11 [Source:ZFIN;Acc:ZDB-GENE-090313-183]
40. si:ch73-343l4.2 ENSDARG00000079903 10 1.736 - - - 0.817 0.919 - - - - si:ch73-343l4.2 [Source:ZFIN;Acc:ZDB-GENE-090313-154]
41. LRFN4_1 LRFN4_1 5 1.732 - 1.000 - - - - - 0.732 -
42. zgc:112958 zgc:112958 5 1.717 - - - 1.000 - - - - 0.717
43. si:ch211-215m21.27 si:ch211-215m21.27 3 1.702 - - - - 0.916 - - - 0.786
44. CR388416.1 CR388416.1 3 1.664 - - - - 0.872 - - 0.792 -
45. XCR1 XCR1 9 1.627 - - - - - 0.841 - - 0.786
46. hmgcra ENSDARG00000052734, ENSDARG00000109336 45 1.614 - - - 0.773 - 0.841 - - - 3-hydroxy-3-methylglutaryl-CoA reductase a [Source:ZFIN;Acc:ZDB-GENE-040401-2]
47. si:ch211-271e10.1 ENSDARG00000095735 15 1.6 - - - - 0.759 0.841 - - - si:ch211-271e10.1 [Source:ZFIN;Acc:ZDB-GENE-060526-145]
48. zgc:152670 ENSDARG00000017038, ENSDARG00000117151 587 1.574 - - - - - 0.841 - 0.733 - zgc:152670 [Source:ZFIN;Acc:ZDB-GENE-060929-954]
49. GPR137B_1 GPR137B_1 8 1.515 - - - 0.714 - 0.801 - - -
50. nr4a2a ENSDARG00000017007 140 1.486 - - 0.720 - - - 0.766 - - nuclear receptor subfamily 4, group A, member 2a [Source:ZFIN;Acc:ZDB-GENE-990415-184]
51. CABZ01117437.1 CABZ01117437.1 11 1 - - - - - - 1.000 - -
52. pycr1 pycr1 1258 1 - 1.000 - - - - - - -
53. ZNF70_9 ZNF70_9 1 1 - 1.000 - - - - - - -
54. BX323882.1 ENSDARG00000101656 2 1 - - 1.000 - - - - - - butyrophilin subfamily 2 member A2-like [Source:NCBI gene;Acc:563995]
55. FAM150A 14 1 - - - - - - 1.000 - - family with sequence similarity 150 member A, transcript variant X2
56. zgc:165409_1 ENSDARG00000091385 65 1 - 1.000 - - - - - - - zgc:165409 [Source:ZFIN;Acc:ZDB-GENE-070615-19]
57. zgc:112994 ENSDARG00000026296 5 1 - 1.000 - - - - - - - zgc:112994 [Source:ZFIN;Acc:ZDB-GENE-050522-519]
58. GPC5 GPC5 11 1 - - - - - - 1.000 - -
59. zgc:153345 ENSDARG00000055622 29 1 - - - - - - 1.000 - - zgc:153345 [Source:ZFIN;Acc:ZDB-GENE-061103-487]
60. si:dkeyp-82h4.1 ENSDARG00000096463 18 1 - 1.000 - - - - - - - si:dkeyp-82h4.1 [Source:ZFIN;Acc:ZDB-GENE-120709-49]
61. CMA1 CMA1 0 1 - - - 1.000 - - - - -
62. BX321870.1 ENSDARG00000098519 9 1 - 1.000 - - - - - - -
63. rims1a ENSDARG00000074680 143 1 - 1.000 - - - - - - - regulating synaptic membrane exocytosis 1a [Source:ZFIN;Acc:ZDB-GENE-090312-135]
64. GPR32 GPR32 0 1 - - - - - - 1.000 - -
65. URB1 ENSDARG00000060308 78 1 - - - - - - 1.000 - - URB1 ribosome biogenesis 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5181]
66. si:ch211-152l15.4 si:ch211-152l15.4 13 1 - 1.000 - - - - - - -
67. CR318653.1 ENSDARG00000104557 29 1 - - - - - - 1.000 - -
68. si:dkeyp-59a8.1 si:dkeyp-59a8.1 6 1 - 1.000 - - - - - - -
69. hbaa2 ENSDARG00000069735 10 1 - 1.000 - - - - - - - hemoglobin, alpha adult 2 [Source:ZFIN;Acc:ZDB-GENE-081104-38]
70. grin2bb ENSDARG00000030376 60 1 - 1.000 - - - - - - - glutamate receptor, ionotropic, N-methyl D-aspartate 2B, genome duplicate b [Source:ZFIN;Acc:ZDB-GENE-061207-27]
71. BX004785.2 ENSDARG00000093487 10 1 - - - - - - 1.000 - -
72. si:ch211-240g9.1 36 1 - - - - - - 1.000 - - si:ch211-240g9.1
73. si:dkeyp-106c3.1 ENSDARG00000090623 225 1 - 1.000 - - - - - - - si:dkeyp-106c3.1 [Source:ZFIN;Acc:ZDB-GENE-050411-73]
74. FAIM2 FAIM2 43 1 - 1.000 - - - - - - -
75. DOCK4 DOCK4 78 1 - 1.000 - - - - - - -
76. HIST2H4A HIST2H4A 33 1 - - - 1.000 - - - - -
77. vip ENSDARG00000078247 10 1 - 1.000 - - - - - - - vasoactive intestinal peptide [Source:ZFIN;Acc:ZDB-GENE-080204-3]
78. si:dkey-208k22.2 si:dkey-208k22.2 9 1 - - 1.000 - - - - - -
79. ifnphi1 ENSDARG00000025607 6 1 - 1.000 - - - - - - - interferon phi 1 [Source:ZFIN;Acc:ZDB-GENE-030721-3]
80. GCSH GCSH 0 1 - - - 1.000 - - - - -
81. si:dkey-225k4.1 ENSDARG00000092045 47 1 - 1.000 - - - - - - - si:dkey-225k4.1 [Source:ZFIN;Acc:ZDB-GENE-091204-219]
82. AL954676.2 AL954676.2 50 1 - 1.000 - - - - - - -
83. kdm2ba ENSDARG00000036593 96 1 - - - - - - 1.000 - - lysine (K)-specific demethylase 2Ba [Source:ZFIN;Acc:ZDB-GENE-040426-2195]
84. ZNF135_2 ZNF135_2 27 1 - 1.000 - - - - - - -
85. LRG1 LRG1 304 1 - 1.000 - - - - - - -
86. tdrd9 ENSDARG00000013453 22 1 - - 1.000 - - - - - - tudor domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-090313-193]
87. itih6 ENSDARG00000056037 3 1 - 1.000 - - - - - - - inter-alpha-trypsin inhibitor heavy chain family, member 6 [Source:ZFIN;Acc:ZDB-GENE-050603-1]
88. sycp2 ENSDARG00000088950 3 1 - 1.000 - - - - - - - synaptonemal complex protein 2 [Source:ZFIN;Acc:ZDB-GENE-090313-237]
89. vrtn ENSDARG00000061963, ENSDARG00000115943 42 1 - - - - - - 1.000 - - vertebrae development associated [Source:ZFIN;Acc:ZDB-GENE-060929-700]
90. zgc:152968 ENSDARG00000037002 6 1 - 1.000 - - - - - - - zgc:152968 [Source:ZFIN;Acc:ZDB-GENE-061013-448]
91. HYKK_1 HYKK_1 4 1 - 1.000 - - - - - - -
92. BX511066.4 BX511066.4 6 1 - - - 1.000 - - - - -
93. CU457778.2 ENSDARG00000109381 2 1 - 1.000 - - - - - - - gastrula zinc finger protein XlCGF8.2DB-like [Source:NCBI gene;Acc:100329258]
94. CABZ01079192.1 ENSDARG00000101629 23 1 - 1.000 - - - - - - - sucrase-isomaltase (alpha-glucosidase) [Source:NCBI gene;Acc:100148922]
95. si:dkey-165b20.3 ENSDARG00000099544 6 1 - 1.000 - - - - - - - si:dkey-165b20.3 [Source:ZFIN;Acc:ZDB-GENE-110913-172]
96. numbl ENSDARG00000101949, ENSDARG00000112946 87 1 - - - - - - 1.000 - - numb homolog (Drosophila)-like [Source:ZFIN;Acc:ZDB-GENE-051113-340]
97. PRR12 PRR12 38 1 - 1.000 - - - - - - -
98. BX897671.1 BX897671.1 10 1 - - - - - - 1.000 - -
99. atp2b2 ENSDARG00000044902, ENSDARG00000063433 140 1 - 1.000 - - - - - - - ATPase plasma membrane Ca2+ transporting 2 [Source:ZFIN;Acc:ZDB-GENE-061016-1]
100. si:dkeyp-10a3.2 18 1 - 1.000 - - - - - - - si:dkeyp-10a3.2

There are 1129 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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