Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for slbp

Gene Name Gene ID Reads Annotation
slbp ENSDARG00000100558 3405 stem-loop binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-9686]










Genes with expression patterns similar to slbp

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. slbp ENSDARG00000100558 3405 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 stem-loop binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-9686]
2. hnrnpa0l ENSDARG00000036161, ENSDARG00000076380, ENSDARG00000114889 72444 3.863 0.710 - 0.732 - 0.737 - - 0.859 0.825 heterogeneous nuclear ribonucleoprotein A0, like [Source:ZFIN;Acc:ZDB-GENE-030131-618]
3. CR936437.1 CR936437.1 6465 3.236 - - 0.809 0.840 0.825 - - - 0.762
4. cspg5a ENSDARG00000069981 1699 3.138 0.758 - 0.730 - - - - 0.813 0.837 chondroitin sulfate proteoglycan 5a [Source:ZFIN;Acc:ZDB-GENE-080425-4]
5. smc3 ENSDARG00000019000, ENSDARG00000112055 6553 3.131 - - 0.791 0.804 - 0.807 - 0.729 - structural maintenance of chromosomes 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3196]
6. her4.1 ENSDARG00000056732 1264 3.005 0.716 - - 0.732 - - - 0.701 0.856 hairy-related 4, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-980526-521]
7. vdac1 ENSDARG00000045132 8051 2.499 - 0.929 - - 0.805 - - - 0.765 voltage-dependent anion channel 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6514]
8. TNPO2 ENSDARG00000042887 2290 2.444 - 0.864 - - 0.751 - - - 0.829 transportin 2 [Source:HGNC Symbol;Acc:HGNC:19998]
9. cdc6 ENSDARG00000009942, ENSDARG00000109602 2540 2.43 - - - 0.880 0.779 - - 0.771 - cell division cycle 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050506-131]
10. sumo3a ENSDARG00000028119 13447 2.408 - - - 0.917 - - - 0.737 0.754 small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
11. uhrf1 ENSDARG00000103409 3282 2.389 - - - 0.740 - - - 0.847 0.802 ubiquitin-like with PHD and ring finger domains 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2039]
12. smarcb1a ENSDARG00000033647, ENSDARG00000111561 3528 2.359 - - - - 0.776 - - 0.734 0.849 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1a [Source:ZFIN;Acc:ZDB-GENE-041114-5]
13. snrpd1 ENSDARG00000011648 8615 2.355 - - 0.769 0.780 0.806 - - - - small nuclear ribonucleoprotein D1 polypeptide [Source:ZFIN;Acc:ZDB-GENE-020419-14]
14. her2 ENSDARG00000038205 3219 2.354 0.754 - - - 0.892 - - 0.708 - hairy-related 2 [Source:ZFIN;Acc:ZDB-GENE-980526-274]
15. LIG1 ENSDARG00000060041, ENSDARG00000110159, ENSDARG00000113788 8110 2.35 - - - 0.700 0.853 - - - 0.797 ligase I, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-110404-2]
16. whsc1l1 8544 2.346 - - - - - - 0.781 0.854 0.711 Wolf-Hirschhorn syndrome candidate 1-like 1, transcript variant X2
17. msi1 ENSDARG00000010710 2634 2.345 - - 0.790 0.711 - - - - 0.844 musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
18. zswim5 ENSDARG00000055900 4243 2.343 - - - - 0.733 - - 0.811 0.799 zinc finger, SWIM-type containing 5 [Source:ZFIN;Acc:ZDB-GENE-030925-30]
19. u2af2b ENSDARG00000011740 6946 2.333 - 0.769 0.736 - - - - - 0.828 U2 small nuclear RNA auxiliary factor 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1881]
20. tmem35 ENSDARG00000052567 5685 2.332 0.785 - - 0.741 - - - 0.806 - transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
21. dut ENSDARG00000106529 3120 2.329 - - - - 0.764 - 0.762 - 0.803 deoxyuridine triphosphatase [Source:ZFIN;Acc:ZDB-GENE-041010-93]
22. C1H4orf27 C1H4orf27 1961 2.329 - - - - 0.807 0.772 - 0.750 -
23. myt1a ENSDARG00000074030, ENSDARG00000116035 2839 2.312 - - - - 0.749 - - 0.712 0.851 myelin transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3885]
24. lrrn1 ENSDARG00000060115, ENSDARG00000115960 5175 2.308 0.773 0.835 - 0.700 - - - - - leucine rich repeat neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-071126-1]
25. AGO1 ENSDARG00000092644 4521 2.302 0.745 - - - 0.830 - - 0.727 - argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]
26. CABZ01111990.1 CABZ01111990.1 4374 2.296 0.727 - - - - - - 0.730 0.839
27. rpa3 ENSDARG00000002613 2923 2.294 - - 0.701 0.816 0.777 - - - - replication protein A3 [Source:ZFIN;Acc:ZDB-GENE-040426-977]
28. ptpro ENSDARG00000100422, ENSDARG00000110470 1850 2.286 - - 0.727 0.807 - - - - 0.752 protein tyrosine phosphatase, receptor type, O [Source:ZFIN;Acc:ZDB-GENE-070424-54]
29. ap1s2 ENSDARG00000058504, ENSDARG00000114515 6499 2.274 - - - 0.730 0.767 - - 0.777 - adaptor related protein complex 1 subunit sigma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5448]
30. u2af1 ENSDARG00000015325 3217 2.267 0.707 - - 0.768 0.792 - - - - U2 small nuclear RNA auxiliary factor 1 [Source:ZFIN;Acc:ZDB-GENE-020419-1]
31. rcor2 ENSDARG00000008278 1678 2.259 - - 0.746 0.779 - - - 0.734 - REST corepressor 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1812]
32. smc1al ENSDARG00000058203 8838 2.258 - 0.728 0.813 - - - 0.717 - - structural maintenance of chromosomes 1A, like [Source:ZFIN;Acc:ZDB-GENE-040426-57]
33. kdm1a ENSDARG00000060679 6152 2.258 - - 0.750 0.751 - - - 0.757 - lysine (K)-specific demethylase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7828]
34. hirip3 ENSDARG00000027749, ENSDARG00000115688 5875 2.256 0.717 - 0.793 - - - - 0.746 - HIRA interacting protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-5753]
35. ewsr1b ENSDARG00000020465, ENSDARG00000117011 10260 2.253 - - 0.784 0.730 - - - 0.739 - EWS RNA-binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1600]
36. hmgb3a ENSDARG00000056725 15668 2.238 0.742 - - - 0.727 - - - 0.769 high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
37. mtss1l mtss1l 2494 2.231 0.778 - 0.704 - 0.749 - - - -
38. TAF15 ENSDARG00000070019 5102 2.213 - - 0.764 0.716 - - - 0.733 - TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-061215-102]
39. sox2 ENSDARG00000070913 2763 2.21 0.747 - 0.704 0.759 - - - - - SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
40. polr2d ENSDARG00000076509 3386 2.187 - - - 0.786 0.700 - - 0.701 - polymerase (RNA) II (DNA directed) polypeptide D [Source:ZFIN;Acc:ZDB-GENE-040714-2]
41. ndst2a ENSDARG00000086269 754 1.705 - 0.887 - - - 0.818 - - - N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2a [Source:ZFIN;Acc:ZDB-GENE-060810-182]
42. ezh2 ENSDARG00000010571 3273 1.698 - - 0.850 0.848 - - - - - enhancer of zeste 2 polycomb repressive complex 2 subunit [Source:ZFIN;Acc:ZDB-GENE-041111-259]
43. hnrnpub ENSDARG00000004735 16496 1.692 - - - - 0.873 - - 0.819 - heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
44. cdc34b ENSDARG00000012627 3879 1.682 - - - - - - - 0.862 0.820 cell division cycle 34 homolog (S. cerevisiae) b [Source:ZFIN;Acc:ZDB-GENE-040718-439]
45. lmnb2 ENSDARG00000101624 11304 1.677 - - - - - 0.850 - 0.827 - lamin B2 [Source:ZFIN;Acc:ZDB-GENE-990630-13]
46. ldb1a ENSDARG00000010137 3035 1.668 - 0.911 - - - - - 0.757 - LIM domain binding 1a [Source:ZFIN;Acc:ZDB-GENE-990415-138]
47. slc29a1a ENSDARG00000101289 2074 1.667 - - - - - - - 0.854 0.813 solute carrier family 29 (equilibrative nucleoside transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-050913-138]
48. ilf3a ENSDARG00000058660, ENSDARG00000116860 3760 1.663 - 0.877 0.786 - - - - - - interleukin enhancer binding factor 3a [Source:ZFIN;Acc:ZDB-GENE-030131-3151]
49. ppp1caa ENSDARG00000003486, ENSDARG00000115977 5931 1.658 - - - - 0.841 - - - 0.817 protein phosphatase 1, catalytic subunit, alpha isozyme a [Source:ZFIN;Acc:ZDB-GENE-040516-3]
50. fam60al 2846 1.652 - - - 0.775 - - - 0.877 - family with sequence similarity 60, member A, like
51. rbb4 rbb4 15541 1.65 - - 0.876 - - - - - 0.774
52. rrm2_1 ENSDARG00000020711, ENSDARG00000078069 11634 1.648 - - 0.830 - - - - - 0.818 ribonucleotide reductase M2 polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-25]
53. ube2d1a ENSDARG00000029107, ENSDARG00000111656 3658 1.646 - 0.805 - - - - - - 0.841 ubiquitin-conjugating enzyme E2D 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1609]
54. cbx3a ENSDARG00000003860 4922 1.645 - - - - - - 0.832 - 0.813 chromobox homolog 3a (HP1 gamma homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-1158]
55. her15.2 her15.2 1701 1.639 - - - - 0.856 - - - 0.783
56. nucks1a ENSDARG00000078473 28285 1.635 - - 0.785 - - - - 0.850 - nuclear casein kinase and cyclin-dependent kinase substrate 1a [Source:ZFIN;Acc:ZDB-GENE-040912-175]
57. insm1a ENSDARG00000091756 1838 1.632 - - - - - - - 0.796 0.836 insulinoma-associated 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1810]
58. srsf6b ENSDARG00000016783 9926 1.632 - - - - - - - 0.757 0.875 serine/arginine-rich splicing factor 6b [Source:ZFIN;Acc:ZDB-GENE-041219-1]
59. zgc:112425 zgc:112425 293873 1.624 - - - 0.726 - - - 0.898 -
60. snrnp70 ENSDARG00000077126 5921 1.623 - - - - - - - 0.811 0.812 small nuclear ribonucleoprotein 70 (U1) [Source:ZFIN;Acc:ZDB-GENE-040825-2]
61. insrb ENSDARG00000071524 1820 1.62 - 0.852 - - - 0.768 - - - insulin receptor b [Source:ZFIN;Acc:ZDB-GENE-020503-4]
62. hmmr ENSDARG00000021794, ENSDARG00000111088 2009 1.619 - 0.856 - - 0.763 - - - - hyaluronan-mediated motility receptor (RHAMM) [Source:ZFIN;Acc:ZDB-GENE-030131-731]
63. mta2 ENSDARG00000013031 2932 1.617 - - - - - - - 0.738 0.879 metastasis associated 1 family, member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4803]
64. stmn1b ENSDARG00000033655 9491 1.614 0.748 - - - - - - - 0.866 stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
65. RNF111 ENSDARG00000078802 1357 1.612 - 0.869 - - - 0.743 - - - ring finger protein 111 [Source:ZFIN;Acc:ZDB-GENE-070808-2]
66. snrka ENSDARG00000070832 1366 1.612 0.745 0.867 - - - - - - - SNF related kinase a [Source:ZFIN;Acc:ZDB-GENE-040718-84]
67. ctbp1 ENSDARG00000057007, ENSDARG00000115804 5795 1.61 - - 0.790 - - - - - 0.820 C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]
68. wu:fq41a10 wu:fq41a10 7009 1.608 - - - 0.769 0.839 - - - -
69. kat7 kat7 642 1.608 0.772 0.836 - - - - - - -
70. e2f8 ENSDARG00000057323 1432 1.606 - 0.821 0.785 - - - - - - E2F transcription factor 8 [Source:ZFIN;Acc:ZDB-GENE-041111-260]
71. atxn2l ENSDARG00000011597, ENSDARG00000112336 2104 1.605 - 0.837 - 0.768 - - - - - ataxin 2-like [Source:ZFIN;Acc:ZDB-GENE-030131-3246]
72. zic5 ENSDARG00000016022 1034 1.605 - 0.873 0.732 - - - - - - zic family member 5 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040622-1]
73. tmpob ENSDARG00000022978 8121 1.603 - - 0.799 - - - - - 0.804 thymopoietin b [Source:ZFIN;Acc:ZDB-GENE-050522-8]
74. plp1a ENSDARG00000103732 3544 1.601 0.786 - - - - - - - 0.815 proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
75. puf60b ENSDARG00000001241 13827 1.598 - - - 0.785 - - - - 0.813 poly-U binding splicing factor b [Source:ZFIN;Acc:ZDB-GENE-040625-116]
76. tma7 ENSDARG00000071670 13372 1.598 - - - 0.760 - - - 0.838 - translation machinery associated 7 homolog [Source:ZFIN;Acc:ZDB-GENE-061027-176]
77. polr2a ENSDARG00000099966 5706 1.597 - 0.819 0.778 - - - - - - polymerase (RNA) II (DNA directed) polypeptide A [Source:ZFIN;Acc:ZDB-GENE-041008-78]
78. arnt2 ENSDARG00000103697 5731 1.597 - - - - - - - 0.848 0.749 aryl-hydrocarbon receptor nuclear translocator 2 [Source:ZFIN;Acc:ZDB-GENE-001207-3]
79. zgc:162232 zgc:162232 251 1.594 - 0.884 - - - 0.710 - - -
80. MKI67 ENSDARG00000091150 11038 1.592 - - - 0.736 - - - - 0.856 marker of proliferation Ki-67 [Source:ZFIN;Acc:ZDB-GENE-030131-9771]
81. apex1 ENSDARG00000045843 6345 1.591 - - 0.765 - - - - 0.826 - APEX nuclease (multifunctional DNA repair enzyme) 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2761]
82. tia1 ENSDARG00000052536, ENSDARG00000114478 4392 1.59 - - 0.824 - - - - 0.766 - TIA1 cytotoxic granule-associated RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-1506]
83. CR354611.2 CR354611.2 2040 1.589 - 0.869 - 0.720 - - - - -
84. fscn1a ENSDARG00000059680 3999 1.588 - - - - - - - 0.726 0.862 fascin actin-bundling protein 1a [Source:ZFIN;Acc:ZDB-GENE-031009-1]
85. nova2 ENSDARG00000017673 7685 1.587 0.730 - - - - - - - 0.857 neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
86. zc3h13 ENSDARG00000037177, ENSDARG00000113331 2662 1.587 - - - - - - 0.823 - 0.764 zinc finger CCCH-type containing 13 [Source:ZFIN;Acc:ZDB-GENE-040426-1619]
87. dpy30 ENSDARG00000004427 7112 1.587 - - - 0.853 - - - - 0.734 dpy-30 histone methyltransferase complex regulatory subunit [Source:ZFIN;Acc:ZDB-GENE-040718-136]
88. srpk1b ENSDARG00000031560 2079 1.586 - - 0.732 0.854 - - - - - SRSF protein kinase 1b [Source:ZFIN;Acc:ZDB-GENE-070112-2292]
89. mbd3b ENSDARG00000042029, ENSDARG00000061810 4561 1.586 0.770 - - - - - - - 0.816 methyl-CpG binding domain protein 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9792]
90. ing4 ENSDARG00000030716 5908 1.584 - - - - 0.807 - - 0.777 - inhibitor of growth family, member 4 [Source:ZFIN;Acc:ZDB-GENE-050522-47]
91. smarcd1 ENSDARG00000019004 6028 1.583 - - - - - 0.838 - - 0.745 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1835]
92. GOLM1 GOLM1 1845 1.581 - 0.857 - - - - 0.724 - -
93. h2afva ENSDARG00000068820 16427 1.581 - - - 0.819 - - - - 0.762 H2A histone family, member Va [Source:ZFIN;Acc:ZDB-GENE-020717-1]
94. nrarpb ENSDARG00000018958 6225 1.581 0.726 - - 0.855 - - - - - NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
95. mab21l1 ENSDARG00000102047 4665 1.581 - 0.777 - - - - - 0.804 - mab-21-like 1 [Source:ZFIN;Acc:ZDB-GENE-020516-1]
96. CCNA2 ENSDARG00000011094 3996 1.58 - - 0.785 0.795 - - - - - cyclin A2 [Source:ZFIN;Acc:ZDB-GENE-020418-1]
97. prmt1 ENSDARG00000010246 11311 1.58 - - 0.761 - - - - 0.819 - protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693]
98. ilf2 ENSDARG00000014591 14543 1.579 - - - - - - - 0.855 0.724 interleukin enhancer binding factor 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2345]
99. celf3a ENSDARG00000034668 2432 1.578 - - - - 0.788 - - 0.790 - cugbp, Elav-like family member 3a [Source:ZFIN;Acc:ZDB-GENE-000501-2]
100. dnmt3b dnmt3b 2522 1.577 - 0.799 0.778 - - - - - -

There are 1511 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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