Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for skor1b

Gene Name Gene ID Reads Annotation
skor1b ENSDARG00000062448, ENSDARG00000112341 282 SKI family transcriptional corepressor 1b [Source:ZFIN;Acc:ZDB-GENE-050419-82]










Genes with expression patterns similar to skor1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. skor1b ENSDARG00000062448, ENSDARG00000112341 282 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SKI family transcriptional corepressor 1b [Source:ZFIN;Acc:ZDB-GENE-050419-82]
2. pou3f2a ENSDARG00000070220 817 3.194 0.779 0.714 - - - 0.972 0.729 - - POU class 3 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-139]
3. dtnbp1b ENSDARG00000055206 64 2.716 0.888 - - - - 0.848 0.980 - - dystrobrevin binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-060503-889]
4. SLC35F4 ENSDARG00000103124 55 2.687 0.968 - - - - 0.804 0.915 - - solute carrier family 35, member F4 [Source:ZFIN;Acc:ZDB-GENE-131121-49]
5. SEZ6 SEZ6 262 2.677 0.811 1.000 - - - - 0.866 - -
6. elavl4 ENSDARG00000045639 998 2.658 - 0.840 - - - 0.909 0.909 - - ELAV like neuron-specific RNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-990415-246]
7. atp8a1 ENSDARG00000063001 146 2.581 - 0.946 - - - 0.723 0.912 - - ATPase phospholipid transporting 8A1 [Source:ZFIN;Acc:ZDB-GENE-060929-36]
8. fbxo41 ENSDARG00000078908 95 2.564 0.898 - - - - 0.892 0.774 - - F-box protein 41 [Source:ZFIN;Acc:ZDB-GENE-090313-350]
9. nell2b ENSDARG00000062797 854 2.56 0.860 - - - - 0.793 0.907 - - neural EGFL like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-8026]
10. vwc2 ENSDARG00000076495 22 2.556 - - - - - 0.845 0.926 0.785 - von Willebrand factor C domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-090313-315]
11. MPP3_1 MPP3_1 88 2.51 0.839 - - - - 0.720 0.951 - -
12. her15.1 ENSDARG00000054560, ENSDARG00000054562 1500 2.508 - 1.000 - - - 0.800 0.708 - - hairy and enhancer of split-related 15, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030707-2]
13. kctd4 ENSDARG00000068691, ENSDARG00000116087 85 2.507 0.736 - - - - 0.845 0.926 - - potassium channel tetramerization domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-040704-71]
14. nat8l ENSDARG00000077256, ENSDARG00000115322 3513 2.502 0.813 - - - - 0.802 0.887 - - N-acetyltransferase 8-like [Source:ZFIN;Acc:ZDB-GENE-030729-4]
15. cdh7 582 2.5 - 0.776 - - - 0.836 0.888 - - cadherin 7, type 2, transcript variant X1
16. dbx1b ENSDARG00000001859, ENSDARG00000113468 810 2.478 0.795 - - - - 0.739 0.944 - - developing brain homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-000128-11]
17. atp6v1b2 ENSDARG00000043465, ENSDARG00000113422 682 2.474 0.782 - - - - 0.759 0.933 - - ATPase H+ transporting V1 subunit B2 [Source:ZFIN;Acc:ZDB-GENE-030711-4]
18. clstn3 ENSDARG00000073883 590 2.466 0.775 - - - - 0.759 0.932 - - calsyntenin 3 [Source:ZFIN;Acc:ZDB-GENE-100921-73]
19. SLITRK5 SLITRK5 122 2.462 0.827 - - - - 0.829 0.806 - -
20. GABRG1 ENSDARG00000101995 201 2.46 0.768 - - - - 0.847 0.845 - - gamma-aminobutyric acid type A receptor gamma1 subunit [Source:ZFIN;Acc:ZDB-GENE-141215-66]
21. her2 ENSDARG00000038205 3219 2.456 0.759 - - - - 0.865 0.832 - - hairy-related 2 [Source:ZFIN;Acc:ZDB-GENE-980526-274]
22. nbeaa ENSDARG00000070080 862 2.456 0.779 - - - - 0.799 0.878 - - neurobeachin a [Source:ZFIN;Acc:ZDB-GENE-050320-68]
23. dbx1a ENSDARG00000086393 3161 2.444 0.707 - - - - 0.763 0.974 - - developing brain homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-000128-8]
24. STMN3 ENSDARG00000038465 1009 2.443 0.827 - - - - 0.706 0.910 - - stathmin-like 3 [Source:ZFIN;Acc:ZDB-GENE-081124-2]
25. dpysl3 ENSDARG00000002587 4381 2.439 0.755 - - - - 0.805 0.879 - - dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
26. syngr3a ENSDARG00000014871 405 2.435 0.871 - - - - 0.815 0.749 - - synaptogyrin 3a [Source:ZFIN;Acc:ZDB-GENE-050522-541]
27. tmem59l ENSDARG00000003655 1536 2.434 0.743 - - - - 0.849 0.842 - - transmembrane protein 59-like [Source:ZFIN;Acc:ZDB-GENE-040426-2651]
28. calm3a ENSDARG00000015050, ENSDARG00000100825 1817 2.434 0.739 - - - - 0.816 0.879 - - calmodulin 3a (phosphorylase kinase, delta) [Source:ZFIN;Acc:ZDB-GENE-030131-5590]
29. necab2 ENSDARG00000056745, ENSDARG00000110976 304 2.432 - 0.714 - - - 0.810 0.908 - - N-terminal EF-hand calcium binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-050706-167]
30. sypb ENSDARG00000002230 262 2.431 0.700 - - - - 0.821 0.910 - - synaptophysin b [Source:ZFIN;Acc:ZDB-GENE-040718-205]
31. syt12 ENSDARG00000101776 215 2.416 0.921 - - - - 0.703 0.792 - - synaptotagmin XII [Source:ZFIN;Acc:ZDB-GENE-081022-147]
32. CABZ01111990.1 CABZ01111990.1 4374 2.415 0.752 - - - - 0.772 0.891 - -
33. rbfox3 rbfox3 1443 2.398 0.774 - - - - 0.721 0.903 - -
34. tmie ENSDARG00000069423 305 2.369 0.786 - - - - 0.771 0.812 - - transmembrane inner ear [Source:ZFIN;Acc:ZDB-GENE-061207-9]
35. SPOCK1 ENSDARG00000074644 794 2.364 0.714 - - - - 0.809 0.841 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:ZFIN;Acc:ZDB-GENE-110428-1]
36. hmp19 2554 2.361 0.799 - 0.774 - - - 0.788 - - HMP19 protein
37. CABZ01080599.2 CABZ01080599.2 192 2.356 0.768 - - - - 0.767 0.821 - -
38. tuba1c ENSDARG00000055216 8384 2.352 0.747 - - - - 0.707 0.898 - - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
39. im:7162084 im:7162084 665 2.35 - - - - - 0.769 0.873 - 0.708
40. mpz ENSDARG00000038609 1740 2.348 0.767 - - - - - 0.879 0.702 - myelin protein zero [Source:ZFIN;Acc:ZDB-GENE-010724-4]
41. nes ENSDARG00000088805 2710 2.346 0.772 - - - - 0.810 0.764 - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
42. scn8aa ENSDARG00000005775 792 2.344 0.707 - - - - 0.760 0.877 - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
43. CU683901.1 CU683901.1 187 2.318 0.757 - - - - 0.762 0.799 - -
44. AL935272.2 AL935272.2 37 2.318 0.755 0.714 - - - 0.849 - - -
45. cdh4 ENSDARG00000015002, ENSDARG00000110803, ENSDARG00000110870 97 2.317 0.721 - - - - 0.740 0.856 - - cadherin 4, type 1, R-cadherin (retinal) [Source:ZFIN;Acc:ZDB-GENE-991207-1]
46. CU896645.1 CU896645.1 10 2.314 0.755 0.714 - - - 0.845 - - -
47. nhlh2 ENSDARG00000025495 1860 2.313 0.784 - - - - 0.745 0.784 - - nescient helix loop helix 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1809]
48. SLITRK4 ENSDARG00000079781 54 2.298 - 0.714 - - - 0.832 0.752 - - SLIT and NTRK-like family, member 4 [Source:ZFIN;Acc:ZDB-GENE-140303-1]
49. nova2 ENSDARG00000017673 7685 2.291 0.720 - - - - 0.782 0.789 - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
50. TRIM46 TRIM46 73 2.284 0.755 - - - - 0.772 0.757 - -
51. EFCC1 ENSDARG00000077826 1359 2.262 0.730 - - - - 0.704 0.828 - - EF-hand and coiled-coil domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-120813-3]
52. map7d2a ENSDARG00000068480 513 2.247 0.725 - - - - 0.713 0.809 - - MAP7 domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-060526-150]
53. ATP6AP1L ATP6AP1L 164 2.246 - 0.714 - - - 0.743 0.789 - -
54. CR538726.1 ENSDARG00000097179 321 2.23 0.805 0.714 - - - 0.711 - - -
55. rusc1 ENSDARG00000078125 617 2.213 0.716 - - - - 0.747 0.750 - - RUN and SH3 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100922-274]
56. MAP6D1 ENSDARG00000079777 47 1.926 - 1.000 - - - - 0.926 - - MAP6 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-081104-293]
57. xkr6 xkr6 286 1.903 - 1.000 - - - - 0.903 - -
58. sox14 ENSDARG00000070929 352 1.896 - 1.000 - - - - 0.896 - - SRY (sex determining region Y)-box 14 [Source:ZFIN;Acc:ZDB-GENE-051113-268]
59. mir219-2 129 1.872 - - - - - 0.904 0.968 - - microRNA 219-2
60. FGFBP3 FGFBP3 993 1.863 - - - - - 0.936 0.927 - -
61. SAMD14 145 1.854 - - - - - 0.887 0.967 - - sterile alpha motif domain containing 14, transcript variant X3
62. cacna1g ENSDARG00000089913 19 1.846 - - - - - 0.920 0.926 - - calcium channel, voltage-dependent, T type, alpha 1G subunit [Source:ZFIN;Acc:ZDB-GENE-090514-2]
63. ntng2a ENSDARG00000077367 43 1.846 - - - - - 0.920 0.926 - - netrin g2a [Source:ZFIN;Acc:ZDB-GENE-081105-186]
64. nr4a2a ENSDARG00000017007 140 1.845 - 1.000 - - - 0.845 - - - nuclear receptor subfamily 4, group A, member 2a [Source:ZFIN;Acc:ZDB-GENE-990415-184]
65. SGIP1 SGIP1 236 1.841 0.919 - - - - - 0.922 - -
66. her3 ENSDARG00000076857 131 1.839 0.913 - - - - - 0.926 - - hairy-related 3 [Source:ZFIN;Acc:ZDB-GENE-980526-204]
67. lhx1a ENSDARG00000014018 958 1.829 0.886 - - - - - 0.943 - - LIM homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-347]
68. GRIN3A ENSDARG00000075802 27 1.804 - - - - - 0.907 0.897 - - glutamate receptor, ionotropic, N-methyl-D-aspartate 3A [Source:ZFIN;Acc:ZDB-GENE-130530-780]
69. cdk5r1b ENSDARG00000045087 2075 1.804 - - - - - 0.845 0.959 - - cyclin-dependent kinase 5, regulatory subunit 1b (p35) [Source:ZFIN;Acc:ZDB-GENE-040718-220]
70. SMARCA4 ENSDARG00000104339 48 1.803 - - - - - 0.877 0.926 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 [Source:HGNC Symbol;Acc:HGNC:11100]
71. dbx2 2971 1.801 - - - - - 0.885 0.916 - - developing brain homeobox 2
72. asphd1 ENSDARG00000075813, ENSDARG00000110592 54 1.801 - - - - - 0.845 0.956 - - aspartate beta-hydroxylase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-091204-62]
73. SYT2 ENSDARG00000014169 265 1.788 0.856 - - - - 0.932 - - - synaptotagmin 2 [Source:HGNC Symbol;Acc:HGNC:11510]
74. penka ENSDARG00000004869 161 1.788 - - - - - 0.973 0.815 - - proenkephalin a [Source:ZFIN;Acc:ZDB-GENE-030729-31]
75. GJD2 GJD2 1351 1.779 0.876 - - - - - 0.903 - -
76. mb21d2a mb21d2a 421 1.778 - - - - - 0.863 0.915 - -
77. FAM171A2 FAM171A2 707 1.777 0.854 - - - - - 0.923 - -
78. INA INA 950 1.774 - - - - - 0.822 0.952 - -
79. kcnd1 ENSDARG00000074746 153 1.774 - - - - - 0.875 0.899 - - potassium voltage-gated channel, Shal-related subfamily, member 1 [Source:ZFIN;Acc:ZDB-GENE-081105-40]
80. mir124-6 64 1.771 - - - - - 0.845 0.926 - - microRNA 124-6
81. si:dkey-15f23.2 si:dkey-15f23.2 2 1.771 - - - - - 0.845 0.926 - -
82. gng2 ENSDARG00000056831 81 1.771 - - - - - 0.845 0.926 - - guanine nucleotide binding protein (G protein), gamma 2 [Source:ZFIN;Acc:ZDB-GENE-050417-59]
83. si:ch211-76l23.5 si:ch211-76l23.5 26 1.771 - - - - - 0.845 0.926 - -
84. TUBB8P7_2 TUBB8P7_2 565 1.77 - - - - - 0.823 0.947 - -
85. si:ch211-208k15.1 ENSDARG00000088650 11 1.766 - - - - - 0.845 0.921 - - si:ch211-208k15.1 [Source:ZFIN;Acc:ZDB-GENE-100922-189]
86. EPB41L1 EPB41L1 1896 1.764 - - - - - 0.816 0.948 - -
87. pdzd4 175 1.763 - - - - - 0.847 0.916 - - PDZ domain containing 4, transcript variant X2
88. evx2 ENSDARG00000059255 317 1.763 - - - - - 0.815 0.948 - - even-skipped homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-980526-215]
89. fsd1 ENSDARG00000062017 207 1.759 0.853 - - - - - 0.906 - - fibronectin type III and SPRY domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060503-218]
90. taok3b ENSDARG00000094052 36 1.756 0.830 - - - - - 0.926 - - TAO kinase 3b [Source:ZFIN;Acc:ZDB-GENE-060526-59]
91. slco4a1 ENSDARG00000075948 74 1.756 - - - - - 0.830 0.926 - - solute carrier organic anion transporter family, member 4A1 [Source:ZFIN;Acc:ZDB-GENE-060606-4]
92. mb21d2b mb21d2b 84 1.752 - 1.000 - - - 0.752 - - -
93. cacng8b ENSDARG00000070626 176 1.751 0.791 - - - - - 0.960 - - calcium channel, voltage-dependent, gamma subunit 8b [Source:ZFIN;Acc:ZDB-GENE-100921-72]
94. ANKRD13D ENSDARG00000098140 88 1.751 - - - - - 0.772 0.979 - - ankyrin repeat domain 13 family, member D [Source:ZFIN;Acc:ZDB-GENE-101007-3]
95. CABZ01028287.1 CABZ01028287.1 626 1.75 0.873 - - - - 0.877 - - -
96. Mar-04 Mar-04 21 1.748 - - - - - 0.822 0.926 - -
97. ankrd29 ENSDARG00000057159, ENSDARG00000112325 64 1.748 - - - - - 0.822 0.926 - - ankyrin repeat domain 29 [Source:ZFIN;Acc:ZDB-GENE-050208-655]
98. cspg5a ENSDARG00000069981 1699 1.743 - - - - - 0.875 0.868 - - chondroitin sulfate proteoglycan 5a [Source:ZFIN;Acc:ZDB-GENE-080425-4]
99. zgc:100906 ENSDARG00000033599 344 1.742 0.946 - - - - 0.796 - - - zgc:100906 [Source:ZFIN;Acc:ZDB-GENE-040801-20]
100. LMTK3 LMTK3 222 1.741 - - - - - 0.830 0.911 - -

There are 1964 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA