Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for skib

Gene Name Gene ID Reads Annotation
skib ENSDARG00000008034 6518 v-ski avian sarcoma viral oncogene homolog b [Source:ZFIN;Acc:ZDB-GENE-990715-10]










Genes with expression patterns similar to skib

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. skib ENSDARG00000008034 6518 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 v-ski avian sarcoma viral oncogene homolog b [Source:ZFIN;Acc:ZDB-GENE-990715-10]
2. nrarpb ENSDARG00000018958 6225 3.332 - 0.789 0.907 - - 0.726 0.910 - - NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
3. chd7 ENSDARG00000075211 12085 2.641 - - - - - 0.780 0.875 - 0.986 chromodomain helicase DNA binding protein 7 [Source:ZFIN;Acc:ZDB-GENE-070912-179]
4. UBE2QL1 ENSDARG00000079276 3474 2.622 - - 0.990 - - 0.813 0.819 - - ubiquitin-conjugating enzyme E2Q family-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8137]
5. ZFHX3 ENSDARG00000103057 7759 2.604 - - - - - 0.773 0.863 - 0.968 zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]
6. sox19a ENSDARG00000010770, ENSDARG00000110497 4683 2.604 - - - 0.877 - 0.858 0.869 - - SRY (sex determining region Y)-box 19a [Source:ZFIN;Acc:ZDB-GENE-980526-102]
7. elavl3 ENSDARG00000014420 8644 2.597 - - 0.974 - - 0.747 0.876 - - ELAV like neuron-specific RNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-980526-76]
8. GJD2_1 GJD2_1 3045 2.512 - - - - - 0.708 0.815 - 0.989
9. FP016176.1 FP016176.1 7030 2.492 - 0.755 - - - 0.894 0.843 - -
10. pl10 pl10 10795 2.471 - - - 0.969 - 0.759 0.743 - -
11. scrt2 ENSDARG00000056175 4331 2.443 - - - 0.997 - 0.701 0.745 - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
12. ptprna ENSDARG00000058646 1327 2.421 - 0.723 - - - 0.806 0.892 - - protein tyrosine phosphatase, receptor type, Na [Source:ZFIN;Acc:ZDB-GENE-030131-3511]
13. sumo3a ENSDARG00000028119 13447 2.365 - - 0.868 - - 0.759 0.738 - - small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
14. g3bp1 ENSDARG00000017741 7622 2.349 - - 0.900 - - 0.715 0.734 - - GTPase activating protein (SH3 domain) binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7452]
15. myt1b ENSDARG00000102879 5411 2.34 - 0.705 - - - 0.779 0.856 - - myelin transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-090313-67]
16. rgmd ENSDARG00000034013, ENSDARG00000111872 4752 2.262 - 0.734 - - - 0.723 0.805 - - RGM domain family, member D [Source:ZFIN;Acc:ZDB-GENE-030131-561]
17. arid2 ENSDARG00000007413 4413 2.206 - 0.752 - - - 0.721 0.733 - - AT rich interactive domain 2 (ARID, RFX-like) [Source:ZFIN;Acc:ZDB-GENE-030131-6311]
18. banf1 ENSDARG00000037009 16466 1.94 - - 0.957 0.983 - - - - - barrier to autointegration factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6657]
19. ADAM22 ENSDARG00000060532 2259 1.896 - - - 0.998 - - 0.898 - - ADAM metallopeptidase domain 22 [Source:ZFIN;Acc:ZDB-GENE-070810-1]
20. notch1b ENSDARG00000052094 7874 1.872 - - - 0.996 - - 0.876 - - notch 1b [Source:ZFIN;Acc:ZDB-GENE-990415-183]
21. gpm6aa ENSDARG00000055455, ENSDARG00000110942 9156 1.869 - - - 0.985 - - 0.884 - - glycoprotein M6Aa [Source:ZFIN;Acc:ZDB-GENE-030710-7]
22. celsr2 ENSDARG00000019726, ENSDARG00000094388 4002 1.855 - - - - - - 0.866 - 0.989 cadherin, EGF LAG seven-pass G-type receptor 2 [Source:ZFIN;Acc:ZDB-GENE-070122-2]
23. lmo3 ENSDARG00000008720, ENSDARG00000114518 4773 1.847 - - 0.991 - - - 0.856 - - LIM domain only 3 [Source:ZFIN;Acc:ZDB-GENE-050522-201]
24. kif11 ENSDARG00000010948 4973 1.835 - - - 0.989 - 0.846 - - - kinesin family member 11 [Source:ZFIN;Acc:ZDB-GENE-020426-1]
25. si:dkey-82i20.5 ENSDARG00000116717 2965 1.834 - - 0.978 - - - - 0.856 - si:dkey-82i20.5 [Source:ZFIN;Acc:ZDB-GENE-110914-101]
26. trim36 ENSDARG00000062794 785 1.83 - - 0.991 - - - 0.839 - - tripartite motif containing 36 [Source:ZFIN;Acc:ZDB-GENE-040426-2936]
27. chd4a ENSDARG00000063535, ENSDARG00000111791 4059 1.816 - - 0.969 - - - 0.847 - - chromodomain helicase DNA binding protein 4a [Source:ZFIN;Acc:ZDB-GENE-041111-187]
28. sp8b ENSDARG00000056666 3988 1.773 - - 0.985 - - 0.788 - - - sp8 transcription factor b [Source:ZFIN;Acc:ZDB-GENE-030131-3654]
29. si:ch211-156j22.4 ENSDARG00000094977 4350 1.769 - - - - - - 0.780 - 0.989 si:ch211-156j22.4 [Source:ZFIN;Acc:ZDB-GENE-030131-1968]
30. hoxa9b ENSDARG00000056819 3081 1.759 - - - - - 0.882 0.877 - - homeobox A9b [Source:ZFIN;Acc:ZDB-GENE-000823-2]
31. EEF1E1 ENSDARG00000071774 3806 1.758 - 0.762 - 0.996 - - - - - eukaryotic translation elongation factor 1 epsilon 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4949]
32. tspan5a ENSDARG00000086033 1865 1.744 - - - 0.999 - - 0.745 - - tetraspanin 5a [Source:ZFIN;Acc:ZDB-GENE-041010-145]
33. ing4 ENSDARG00000030716 5908 1.739 - - 0.982 - - 0.757 - - - inhibitor of growth family, member 4 [Source:ZFIN;Acc:ZDB-GENE-050522-47]
34. C3H19orf43 C3H19orf43 2961 1.738 - - 0.992 - - 0.746 - - -
35. hirip3 ENSDARG00000027749, ENSDARG00000115688 5875 1.736 - - - 0.991 - - 0.745 - - HIRA interacting protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-5753]
36. smad3b ENSDARG00000010207 951 1.732 - - - - - 0.806 0.926 - - SMAD family member 3b [Source:ZFIN;Acc:ZDB-GENE-030128-4]
37. tox ENSDARG00000032317 9126 1.721 - 0.847 - - - - 0.874 - - thymocyte selection-associated high mobility group box [Source:ZFIN;Acc:ZDB-GENE-070912-181]
38. thoc2 ENSDARG00000037503 8711 1.717 - - 0.978 - - - 0.739 - - THO complex 2 [Source:ZFIN;Acc:ZDB-GENE-030616-54]
39. tmem35 ENSDARG00000052567 5685 1.717 - - - - - 0.806 0.911 - - transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
40. chat chat 463 1.708 - - - - - 0.833 0.875 - -
41. TUBA1A ENSDARG00000001889 25294 1.704 - - - - - 0.793 0.911 - - tubulin, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090507-4]
42. metrn ENSDARG00000030367, ENSDARG00000112407, ENSDARG00000115842 7032 1.704 - - - - - 0.839 0.865 - - meteorin, glial cell differentiation regulator [Source:ZFIN;Acc:ZDB-GENE-050102-1]
43. snrpe ENSDARG00000033175 7462 1.7 - - 0.941 - - 0.759 - - - small nuclear ribonucleoprotein polypeptide E [Source:ZFIN;Acc:ZDB-GENE-040426-1112]
44. znf865 ENSDARG00000036698 15532 1.698 - - - - - 0.825 0.873 - - zinc finger protein 865 [Source:ZFIN;Acc:ZDB-GENE-060503-896]
45. slc18a3a ENSDARG00000006356 1285 1.697 - - - - - 0.818 0.879 - - solute carrier family 18 (vesicular acetylcholine transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-060929-990]
46. CABZ01115322.1 CABZ01115322.1 1283 1.696 - - - - - 0.807 0.889 - -
47. atf7ip ENSDARG00000069619 5495 1.693 - - 0.911 - - - 0.782 - - activating transcription factor 7 interacting protein [Source:ZFIN;Acc:ZDB-GENE-061103-178]
48. onecut1 ENSDARG00000007982, ENSDARG00000112251 6307 1.693 - - - - - 0.817 0.876 - - one cut homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1469]
49. hmgb3a ENSDARG00000056725 15668 1.689 - - - - - 0.825 0.864 - - high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
50. BX511121.1 ENSDARG00000029997 1774 1.689 - - - - - 0.793 0.896 - -
51. nes ENSDARG00000088805 2710 1.689 - - - - - 0.785 0.904 - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
52. neurog1 ENSDARG00000056130 3924 1.688 - - - - - 0.807 0.881 - - neurogenin 1 [Source:ZFIN;Acc:ZDB-GENE-990415-174]
53. AGO1 ENSDARG00000092644 4521 1.686 - - - - - 0.810 0.876 - - argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]
54. rtca ENSDARG00000002215 3558 1.686 - - - - - 0.837 0.849 - - RNA 3'-terminal phosphate cyclase [Source:ZFIN;Acc:ZDB-GENE-030131-9687]
55. islr2 ENSDARG00000051875, ENSDARG00000109523 2288 1.685 - - - - - 0.828 0.857 - - immunoglobulin superfamily containing leucine-rich repeat 2 [Source:ZFIN;Acc:ZDB-GENE-050320-95]
56. nova2 ENSDARG00000017673 7685 1.679 - - - - - 0.793 0.886 - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
57. pa2g4b ENSDARG00000070657 7999 1.678 - 0.730 0.948 - - - - - - proliferation-associated 2G4, b [Source:ZFIN;Acc:ZDB-GENE-030131-2182]
58. cdkn1c cdkn1c 17427 1.675 - - 0.827 - - - 0.848 - -
59. ACVR2B 6615 1.672 - - 0.927 - - 0.745 - - - activin A receptor, type IIB
60. CU928222.1 ENSDARG00000097436 1662 1.67 - - - - - 0.783 0.887 - -
61. mnx2a ENSDARG00000042106 939 1.666 - - - - - 0.802 0.864 - - motor neuron and pancreas homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-040415-1]
62. hmgb1b ENSDARG00000030479 10398 1.663 - - - - - 0.794 0.869 - - high mobility group box 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8480]
63. s1pr1 ENSDARG00000042690, ENSDARG00000113842, ENSDARG00000116038 2510 1.662 - 0.810 - - - - 0.852 - - sphingosine-1-phosphate receptor 1 [Source:ZFIN;Acc:ZDB-GENE-001228-2]
64. CABZ01111990.1 CABZ01111990.1 4374 1.661 - - - - - 0.767 0.894 - -
65. dld ENSDARG00000020219 4928 1.661 - - 0.755 - - - 0.906 - - deltaD [Source:ZFIN;Acc:ZDB-GENE-990415-47]
66. EFCC1 ENSDARG00000077826 1359 1.66 - - - - - 0.786 0.874 - - EF-hand and coiled-coil domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-120813-3]
67. STMN3 ENSDARG00000038465 1009 1.659 - - - - - 0.827 0.832 - - stathmin-like 3 [Source:ZFIN;Acc:ZDB-GENE-081124-2]
68. her4.2 ENSDARG00000056729, ENSDARG00000094426 289 1.658 - - - - - 0.803 0.855 - - hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
69. cx43.4 ENSDARG00000007099 16369 1.658 - - - 0.908 - 0.750 - - - connexin 43.4 [Source:ZFIN;Acc:ZDB-GENE-990415-38]
70. dpysl2b ENSDARG00000032083, ENSDARG00000109782 3487 1.655 - - - - - 0.721 0.934 - - dihydropyrimidinase-like 2b [Source:ZFIN;Acc:ZDB-GENE-031105-1]
71. calca ENSDARG00000056590 150 1.653 - - - - - - 0.862 0.791 - calcitonin/calcitonin-related polypeptide, alpha [Source:ZFIN;Acc:ZDB-GENE-040718-173]
72. camk1da ENSDARG00000074905, ENSDARG00000111604 479 1.652 - - - - - - 0.888 0.764 - calcium/calmodulin-dependent protein kinase 1Da [Source:ZFIN;Acc:ZDB-GENE-080402-7]
73. pou3f2b ENSDARG00000076262, ENSDARG00000112713 2439 1.652 - - - - - 0.769 0.883 - - POU class 3 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-370]
74. ADAMTS3 ENSDARG00000060127 2839 1.651 - - - - - 0.778 0.873 - - ADAM metallopeptidase with thrombospondin type 1 motif, 3 [Source:ZFIN;Acc:ZDB-GENE-110223-1]
75. CABZ01029738.1 CABZ01029738.1 327 1.651 - - - - - 0.776 0.875 - -
76. hoxb8b ENSDARG00000054025, ENSDARG00000111056 2106 1.651 - - - - - 0.740 0.911 - - homeobox B8b [Source:ZFIN;Acc:ZDB-GENE-980526-291]
77. rimkla ENSDARG00000016830, ENSDARG00000112193 4111 1.649 - - - - - 0.770 0.879 - - ribosomal modification protein rimK-like family member A [Source:ZFIN;Acc:ZDB-GENE-040912-20]
78. dnmt3ab ENSDARG00000015566 1206 1.649 - 0.760 - - - - 0.889 - - DNA (cytosine-5-)-methyltransferase 3 alpha b [Source:ZFIN;Acc:ZDB-GENE-050314-3]
79. nmt1a ENSDARG00000052966 5918 1.648 - 0.705 0.943 - - - - - - N-myristoyltransferase 1a [Source:ZFIN;Acc:ZDB-GENE-050522-477]
80. sv2c ENSDARG00000059997 592 1.647 - - - - - 0.801 0.846 - - synaptic vesicle glycoprotein 2C [Source:ZFIN;Acc:ZDB-GENE-060526-233]
81. sall1a ENSDARG00000074319, ENSDARG00000111696 1486 1.646 - - - - - 0.801 0.845 - - spalt-like transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-020228-2]
82. im:7162084 im:7162084 665 1.645 - - - - - 0.791 0.854 - -
83. chga ENSDARG00000008829 1086 1.645 - - - - - 0.804 0.841 - - chromogranin A [Source:ZFIN;Acc:ZDB-GENE-041010-161]
84. vim ENSDARG00000010008 3551 1.642 - - - - - 0.774 0.868 - - vimentin [Source:ZFIN;Acc:ZDB-GENE-011212-3]
85. calm1a ENSDARG00000021811 4791 1.642 - - - - - 0.804 0.838 - - calmodulin 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8308]
86. msi1 ENSDARG00000010710 2634 1.641 - - - - - 0.804 0.837 - - musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
87. atp6v0cb ENSDARG00000036577 3472 1.639 - - - - - 0.737 0.902 - - ATPase H+ transporting V0 subunit cb [Source:ZFIN;Acc:ZDB-GENE-030131-4127]
88. sephs1 ENSDARG00000058292 3347 1.638 - - 0.922 - - 0.716 - - - selenophosphate synthetase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3670]
89. nkx6.2 ENSDARG00000104735 5081 1.638 - - - - - 0.757 0.881 - - NK6 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-070626-1]
90. TRIM67 ENSDARG00000108787 290 1.637 - - - - - - 0.841 0.796 - tripartite motif containing 67 [Source:HGNC Symbol;Acc:HGNC:31859]
91. her4.3 ENSDARG00000070770 613 1.635 - - - - - 0.762 0.873 - - hairy-related 4, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-081030-7]
92. sept5a ENSDARG00000013843 1206 1.635 - - - - - 0.821 0.814 - - septin 5a [Source:ZFIN;Acc:ZDB-GENE-030131-7868]
93. chrm3a ENSDARG00000071091 72 1.634 - - - - - 0.790 0.844 - - cholinergic receptor, muscarinic 3a [Source:ZFIN;Acc:ZDB-GENE-090410-4]
94. si:dkey-169l5.3 si:dkey-169l5.3 239 1.633 - - - - - 0.783 0.850 - -
95. CDK5R1 CDK5R1 562 1.633 - - - - - 0.781 0.852 - -
96. mnx2b ENSDARG00000030350 484 1.632 - - - - - 0.754 0.878 - - motor neuron and pancreas homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-040415-2]
97. pacsin1b ENSDARG00000042128 1051 1.632 - - - - - 0.793 0.839 - - protein kinase C and casein kinase substrate in neurons 1b [Source:ZFIN;Acc:ZDB-GENE-050913-35]
98. ptprnb ENSDARG00000077047 2743 1.631 - - - - - 0.800 0.831 - - protein tyrosine phosphatase, receptor type, Nb [Source:ZFIN;Acc:ZDB-GENE-100505-1]
99. hoxa9a ENSDARG00000105013 1509 1.631 - - - - - 0.746 0.885 - - homeobox A9a [Source:ZFIN;Acc:ZDB-GENE-000823-1]
100. zgc:113531 ENSDARG00000038794 2063 1.627 - - - - - 0.780 0.847 - - zgc:113531 [Source:ZFIN;Acc:ZDB-GENE-050320-52]

There are 1858 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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