Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for skia

Gene Name Gene ID Reads Annotation
skia ENSDARG00000042151 1850 v-ski avian sarcoma viral oncogene homolog a [Source:ZFIN;Acc:ZDB-GENE-990715-9]










Genes with expression patterns similar to skia

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. skia ENSDARG00000042151 1850 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 v-ski avian sarcoma viral oncogene homolog a [Source:ZFIN;Acc:ZDB-GENE-990715-9]
2. PGAP3 ENSDARG00000057531, ENSDARG00000112574 2046 2.746 - 0.979 - 0.888 0.879 - - - - post-GPI attachment to proteins 3 [Source:ZFIN;Acc:ZDB-GENE-080204-27]
3. btr12 ENSDARG00000051809 1804 2.42 - 0.971 - - - 0.741 0.708 - - bloodthirsty-related gene family, member 12 [Source:ZFIN;Acc:ZDB-GENE-060929-548]
4. COL28A1_1 COL28A1_1 11434 2.271 - 0.826 - - - 0.725 0.720 - -
5. cab39 ENSDARG00000043451 1326 1.946 0.968 0.978 - - - - - - - calcium binding protein 39 [Source:ZFIN;Acc:ZDB-GENE-040625-158]
6. mrpl19 ENSDARG00000011885 2208 1.928 0.952 0.976 - - - - - - - mitochondrial ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040801-55]
7. ppcs ENSDARG00000061889 224 1.928 0.972 - - 0.956 - - - - - phosphopantothenoylcysteine synthetase [Source:ZFIN;Acc:ZDB-GENE-060512-104]
8. hcls1 ENSDARG00000012729 1547 1.87 - 0.983 - - 0.887 - - - - hematopoietic cell-specific Lyn substrate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7191]
9. cpt1a cpt1a 674 1.864 - 0.958 - - 0.906 - - - -
10. cactin ENSDARG00000059866 553 1.858 - 0.975 - 0.883 - - - - - cactin [Source:ZFIN;Acc:ZDB-GENE-060503-322]
11. sult6b1 ENSDARG00000086826 2070 1.853 0.962 - - - 0.891 - - - - sulfotransferase family, cytosolic, 6b, member 1 [Source:ZFIN;Acc:ZDB-GENE-050417-228]
12. csnk1db ENSDARG00000006125 2581 1.851 - 0.977 - - 0.874 - - - - casein kinase 1, delta b [Source:ZFIN;Acc:ZDB-GENE-040426-2385]
13. ftr67 ENSDARG00000098820 611 1.846 - - - 0.950 0.896 - - - - finTRIM family, member 67 [Source:ZFIN;Acc:ZDB-GENE-060312-27]
14. bcr ENSDARG00000079286 578 1.843 - 0.981 - 0.862 - - - - - breakpoint cluster region [Source:ZFIN;Acc:ZDB-GENE-040724-43]
15. psma4 ENSDARG00000045928 5112 1.832 - 0.926 - - 0.906 - - - - proteasome subunit alpha 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1932]
16. ctsf ENSDARG00000063095 4564 1.829 0.967 - - - 0.862 - - - - cathepsin F [Source:ZFIN;Acc:ZDB-GENE-030131-9831]
17. tars ENSDARG00000013250, ENSDARG00000110996, ENSDARG00000113759 4599 1.825 0.894 0.931 - - - - - - - threonyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-041010-218]
18. mical2b ENSDARG00000020395 470 1.825 - 0.978 - 0.847 - - - - - microtubule associated monooxygenase, calponin and LIM domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-061207-15]
19. fam192a ENSDARG00000041631 4113 1.82 0.960 - - - 0.860 - - - - family with sequence similarity 192, member A [Source:ZFIN;Acc:ZDB-GENE-030131-6692]
20. cplx4b ENSDARG00000059486 3192 1.812 0.905 - - 0.907 - - - - - complexin 4b [Source:ZFIN;Acc:ZDB-GENE-070705-157]
21. rabgef1 ENSDARG00000014430 1176 1.802 - - - 0.903 0.899 - - - - RAB guanine nucleotide exchange factor (GEF) 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1486]
22. pafah1b1b ENSDARG00000026595 1822 1.8 - 0.952 - - 0.848 - - - - platelet-activating factor acetylhydrolase 1b, regulatory subunit 1b [Source:ZFIN;Acc:ZDB-GENE-040116-3]
23. bcar1 ENSDARG00000056525 6563 1.792 - 0.953 - - - - 0.839 - - BCAR1, Cas family scaffold protein [Source:ZFIN;Acc:ZDB-GENE-030131-2774]
24. camlg ENSDARG00000100409 2157 1.79 0.956 - - - 0.834 - - - - calcium modulating ligand [Source:ZFIN;Acc:ZDB-GENE-040426-2407]
25. gpx4b ENSDARG00000076836 8085 1.789 0.945 0.844 - - - - - - - glutathione peroxidase 4b [Source:ZFIN;Acc:ZDB-GENE-030410-3]
26. tmem201 ENSDARG00000077307 453 1.786 - 0.980 - - - - 0.806 - - transmembrane protein 201 [Source:ZFIN;Acc:ZDB-GENE-070410-61]
27. SNORD72 SNORD72 4018 1.786 0.937 - - - 0.849 - - - -
28. nfkbiaa ENSDARG00000005481 948 1.784 - 0.981 - - - - - 0.803 - nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha a [Source:ZFIN;Acc:ZDB-GENE-040426-2227]
29. hbegfa ENSDARG00000075121 1865 1.784 - 0.985 - - 0.799 - - - - heparin-binding EGF-like growth factor a [Source:ZFIN;Acc:ZDB-GENE-080204-119]
30. rcor1 ENSDARG00000031434 2733 1.783 0.981 - - - - - 0.802 - - REST corepressor 1 [Source:ZFIN;Acc:ZDB-GENE-050506-79]
31. patl1 ENSDARG00000017423 2744 1.783 - 0.954 - - 0.829 - - - - protein associated with topoisomerase II homolog 1 (yeast) [Source:ZFIN;Acc:ZDB-GENE-070209-83]
32. IWS1 2428 1.782 - 0.973 - - - - 0.809 - - IWS1, SUPT6H interacting protein, transcript variant X2
33. fbxw11b ENSDARG00000017230, ENSDARG00000112841 2593 1.778 - 0.937 - 0.841 - - - - - F-box and WD repeat domain containing 11b [Source:ZFIN;Acc:ZDB-GENE-040426-2903]
34. prkci ENSDARG00000021225 2472 1.776 - 0.990 - - - - - - 0.786 protein kinase C, iota [Source:ZFIN;Acc:ZDB-GENE-011105-1]
35. itgav ENSDARG00000006314 4277 1.775 - 0.976 - - - - 0.799 - - integrin, alpha V [Source:ZFIN;Acc:ZDB-GENE-060616-382]
36. vgll4l ENSDARG00000068409, ENSDARG00000110132 844 1.775 - - - - 0.925 0.850 - - - vestigial like 4 like [Source:ZFIN;Acc:ZDB-GENE-070112-1682]
37. seh1l ENSDARG00000004280 2915 1.766 - 0.974 - - 0.792 - - - - SEH1-like (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-6689]
38. ZBTB7B ENSDARG00000021891 843 1.766 - 0.986 - 0.780 - - - - - zinc finger and BTB domain containing 7B [Source:ZFIN;Acc:ZDB-GENE-040426-1134]
39. pdcd10a ENSDARG00000035054, ENSDARG00000109378 2227 1.766 0.952 - - - - - 0.814 - - programmed cell death 10a [Source:ZFIN;Acc:ZDB-GENE-040426-1432]
40. uqcrfs1_1 ENSDARG00000007745 2687 1.765 - 0.880 - - 0.885 - - - - ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2060]
41. stk38a ENSDARG00000019973 1343 1.765 0.961 - - - - - 0.804 - - serine/threonine kinase 38a [Source:ZFIN;Acc:ZDB-GENE-040426-2811]
42. ednrab ENSDARG00000062262 565 1.763 - - - 0.862 0.901 - - - - endothelin receptor type Ab [Source:ZFIN;Acc:ZDB-GENE-040426-2364]
43. st8sia2 ENSDARG00000018788 2183 1.761 - 0.979 - - 0.782 - - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-020919-4]
44. mapk3 ENSDARG00000070573 6842 1.761 0.872 - - - 0.889 - - - - mitogen-activated protein kinase 3 [Source:ZFIN;Acc:ZDB-GENE-040121-1]
45. anxa3a ENSDARG00000009196, ENSDARG00000112919 2143 1.759 - 0.977 - - - - 0.782 - - annexin A3a [Source:ZFIN;Acc:ZDB-GENE-040912-58]
46. lsm4 ENSDARG00000023852 6083 1.754 0.883 0.871 - - - - - - - LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-040426-1652]
47. usp25 ENSDARG00000012314 734 1.753 - - - 0.840 0.913 - - - - ubiquitin specific peptidase 25 [Source:ZFIN;Acc:ZDB-GENE-040426-2847]
48. cyb5r3 ENSDARG00000005891 4440 1.73 0.929 - - - 0.801 - - - - cytochrome b5 reductase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3281]
49. selt1a 9746 1.729 - 0.968 - - - - 0.761 - - selenoprotein T, 1a
50. zfand3 ENSDARG00000052833 2682 1.728 - 0.915 - - 0.813 - - - - zinc finger, AN1-type domain 3 [Source:ZFIN;Acc:ZDB-GENE-050706-134]
51. gstp1 ENSDARG00000104068 12698 1.726 0.853 - - - 0.873 - - - - glutathione S-transferase pi 1 [Source:ZFIN;Acc:ZDB-GENE-020806-4]
52. kank1 kank1 2430 1.726 0.955 - - - 0.771 - - - -
53. mtmr7b ENSDARG00000070412, ENSDARG00000112046 724 1.724 - 0.984 - 0.740 - - - - - myotubularin related protein 7b [Source:ZFIN;Acc:ZDB-GENE-050913-66]
54. ptbp3 ENSDARG00000043757 6760 1.72 0.952 - - - - - 0.768 - - polypyrimidine tract binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-091116-1]
55. MON1B_1 MON1B_1 697 1.719 - - - - 0.918 - 0.801 - -
56. ppig ENSDARG00000044431 3427 1.716 0.930 - - - 0.786 - - - - peptidylprolyl isomerase G (cyclophilin G) [Source:ZFIN;Acc:ZDB-GENE-040426-2822]
57. myeov2 3351 1.715 0.949 - - - - - 0.766 - - myeloma overexpressed 2
58. npepl1 ENSDARG00000012871 3064 1.714 0.947 - - - - - 0.767 - - aminopeptidase like 1 [Source:ZFIN;Acc:ZDB-GENE-050417-177]
59. TTC9 ENSDARG00000074363 196 1.71 0.972 - 0.738 - - - - - - tetratricopeptide repeat domain 9 [Source:HGNC Symbol;Acc:HGNC:20267]
60. mfsd10 ENSDARG00000086786 304 1.705 - - - 0.959 - - - 0.746 - major facilitator superfamily domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-050417-154]
61. mboat2a ENSDARG00000031845 1255 1.703 0.969 - - - - - 0.734 - - membrane bound O-acyltransferase domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-041210-257]
62. srp54 ENSDARG00000098367 2301 1.703 - 0.964 - 0.739 - - - - - signal recognition particle 54 [Source:ZFIN;Acc:ZDB-GENE-040426-818]
63. sos1 ENSDARG00000100503 388 1.702 0.971 - - - - 0.731 - - - son of sevenless homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-070209-128]
64. wu:fq41a10 wu:fq41a10 7009 1.701 0.853 - - - 0.848 - - - -
65. MGST1 MGST1 1958 1.7 - 0.983 - 0.717 - - - - -
66. atp6v1d ENSDARG00000011175 8331 1.699 - 0.930 - 0.769 - - - - - ATPase H+ transporting V1 subunit D [Source:ZFIN;Acc:ZDB-GENE-040426-727]
67. ckba ENSDARG00000069752 2002 1.694 - 0.945 - 0.749 - - - - - creatine kinase, brain a [Source:ZFIN;Acc:ZDB-GENE-060929-902]
68. eif1b ENSDARG00000012688 34711 1.693 0.879 0.814 - - - - - - - eukaryotic translation initiation factor 1B [Source:ZFIN;Acc:ZDB-GENE-030131-956]
69. arid4a ENSDARG00000043873 4176 1.69 - 0.972 - - 0.718 - - - - AT rich interactive domain 4A (RBP1-like) [Source:ZFIN;Acc:ZDB-GENE-050809-105]
70. gna12a ENSDARG00000025826 1769 1.689 - - - - 0.888 0.801 - - - guanine nucleotide binding protein (G protein) alpha 12a [Source:ZFIN;Acc:ZDB-GENE-050221-1]
71. mier1b ENSDARG00000001447 1680 1.689 0.966 - - - - - 0.723 - - mesoderm induction early response 1b, transcriptional regulator [Source:ZFIN;Acc:ZDB-GENE-070705-170]
72. galnt12 ENSDARG00000055490 1653 1.687 - 0.959 - - - - 0.728 - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 [Source:ZFIN;Acc:ZDB-GENE-060503-704]
73. agpat4 ENSDARG00000069044 4487 1.686 0.955 - - - - - 0.731 - - 1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta) [Source:ZFIN;Acc:ZDB-GENE-040426-1924]
74. lama5 ENSDARG00000058543 2782 1.686 0.941 - - - - - - 0.745 - laminin, alpha 5 [Source:ZFIN;Acc:ZDB-GENE-030131-9823]
75. ctdsp2 ENSDARG00000036102, ENSDARG00000110420 4625 1.685 - 0.939 - - - - 0.746 - - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-184]
76. tp53rk ENSDARG00000112667 806 1.683 - - - - 0.893 - 0.790 - - TP53 regulating kinase [Source:ZFIN;Acc:ZDB-GENE-050522-123]
77. slc7a8a ENSDARG00000075831 2987 1.683 - 0.974 - 0.709 - - - - - solute carrier family 7 (amino acid transporter light chain, L system), member 8a [Source:ZFIN;Acc:ZDB-GENE-121120-2]
78. wbscr16 wbscr16 791 1.679 - - - - 0.910 - - 0.769 -
79. gfpt2 ENSDARG00000044094 2503 1.675 0.925 - - - 0.750 - - - - glutamine-fructose-6-phosphate transaminase 2 [Source:ZFIN;Acc:ZDB-GENE-071113-1]
80. srsf11 ENSDARG00000098574 12801 1.674 0.836 0.838 - - - - - - - serine/arginine-rich splicing factor 11 [Source:ZFIN;Acc:ZDB-GENE-030131-605]
81. CABZ01044297.1 CABZ01044297.1 2015 1.673 - - - 0.738 0.935 - - - -
82. itga6b ENSDARG00000069946, ENSDARG00000110478 1126 1.669 0.968 - - - - 0.701 - - - integrin, alpha 6b [Source:ZFIN;Acc:ZDB-GENE-050320-5]
83. tmem258 ENSDARG00000078785 9578 1.668 0.879 - - - - - 0.789 - - transmembrane protein 258 [Source:ZFIN;Acc:ZDB-GENE-040426-1739]
84. si:dkey-22o12.7 si:dkey-22o12.7 1812 1.667 - - - - 0.889 - 0.778 - -
85. si:ch73-91k6.2 ENSDARG00000091598 727 1.666 - 0.951 - - - - 0.715 - - si:ch73-91k6.2 [Source:ZFIN;Acc:ZDB-GENE-050208-270]
86. TNRC6B ENSDARG00000074161 2464 1.66 - - - - 0.920 - 0.740 - - trinucleotide repeat containing 6b [Source:ZFIN;Acc:ZDB-GENE-030131-13]
87. hs3st3b1a ENSDARG00000099149, ENSDARG00000113644 443 1.66 - - - 0.841 - - - 0.819 - heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1a [Source:ZFIN;Acc:ZDB-GENE-070202-4]
88. aim1a 2981 1.66 0.950 - - - - 0.710 - - - crystallin beta-gamma domain containing 1a, transcript variant X1
89. C2H1orf123 C2H1orf123 2344 1.658 - 0.956 - 0.702 - - - - -
90. sh3tc2 ENSDARG00000089917 415 1.656 - - - 0.797 - 0.859 - - - SH3 domain and tetratricopeptide repeats 2 [Source:ZFIN;Acc:ZDB-GENE-081104-347]
91. ZDHHC3 ZDHHC3 1208 1.654 - - - - 0.868 - - 0.786 -
92. VDR VDR 489 1.651 - - - - 0.901 0.750 - - -
93. dek ENSDARG00000070108 2262 1.648 - - - - 0.841 - - - 0.807 DEK proto-oncogene [Source:ZFIN;Acc:ZDB-GENE-060512-191]
94. dopey1 438 1.643 - - - 0.910 - - 0.733 - - dopey family member 1, transcript variant X4
95. PARD3B_1 PARD3B_1 1735 1.642 - 0.889 - - - 0.753 - - -
96. aph1b ENSDARG00000005612, ENSDARG00000111794 3318 1.642 0.889 - - - - 0.753 - - - APH1B gamma secretase subunit [Source:ZFIN;Acc:ZDB-GENE-031118-31]
97. atrx ENSDARG00000042236, ENSDARG00000112921, ENSDARG00000116878 7922 1.64 0.928 - - - - - 0.712 - - alpha thalassemia/mental retardation syndrome X-linked homolog (human) [Source:ZFIN;Acc:ZDB-GENE-030912-11]
98. mybbp1a ENSDARG00000078214 2458 1.64 - - - 0.773 0.867 - - - - MYB binding protein (P160) 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9864]
99. cul1a ENSDARG00000019239, ENSDARG00000113068, ENSDARG00000114068 2110 1.639 - - - - 0.884 - 0.755 - - cullin 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2603]
100. CRP CRP 136 1.639 - - - - 0.927 - - 0.712 -

There are 1973 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA