Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for six4a

Gene Name Gene ID Reads Annotation
six4a ENSDARG00000004695 413 SIX homeobox 4a [Source:ZFIN;Acc:ZDB-GENE-010201-2]










Genes with expression patterns similar to six4a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. six4a ENSDARG00000004695 413 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SIX homeobox 4a [Source:ZFIN;Acc:ZDB-GENE-010201-2]
2. asap1b ENSDARG00000039729 842 2.23 - 0.722 - - - 0.791 0.717 - - ArfGAP with SH3 domain, ankyrin repeat and PH domain 1b [Source:ZFIN;Acc:ZDB-GENE-091112-16]
3. sulf1 ENSDARG00000038428 2748 1.7 0.847 0.853 - - - - - - - sulfatase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9242]
4. CR382298.3 CR382298.3 666 1.672 - - - 0.830 - 0.842 - - -
5. klhl41a ENSDARG00000068888 1034 1.665 - 0.852 - - - - 0.813 - - kelch-like family member 41a [Source:ZFIN;Acc:ZDB-GENE-081105-22]
6. arxa ENSDARG00000058011 440 1.645 - 0.874 - - - - 0.771 - - aristaless related homeobox a [Source:ZFIN;Acc:ZDB-GENE-990415-15]
7. kifap3b ENSDARG00000006862 613 1.634 - 0.837 - - - 0.797 - - - kinesin-associated protein 3b [Source:ZFIN;Acc:ZDB-GENE-030131-2219]
8. pax3a ENSDARG00000010192 626 1.624 - 0.842 - - - 0.782 - - - paired box 3a [Source:ZFIN;Acc:ZDB-GENE-980526-52]
9. nae1 ENSDARG00000011301, ENSDARG00000111542 1505 1.617 - 0.754 - - - 0.863 - - - nedd8 activating enzyme E1 subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1552]
10. npr3 ENSDARG00000035253, ENSDARG00000109797, ENSDARG00000110534 857 1.61 0.790 0.820 - - - - - - - natriuretic peptide receptor 3 [Source:ZFIN;Acc:ZDB-GENE-060531-91]
11. hfe2 4113 1.608 0.748 0.860 - - - - - - - hemochromatosis type 2
12. CU302436.1 ENSDARG00000114500 1619 1.591 0.801 0.790 - - - - - - - si:dkey-108k21.25 [Source:NCBI gene;Acc:103909883]
13. nrn1a ENSDARG00000071860 1311 1.587 - 0.831 - - - 0.756 - - - neuritin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-212]
14. prpf31 ENSDARG00000095904 526 1.583 - 0.882 - - - 0.701 - - - PRP31 pre-mRNA processing factor 31 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1561]
15. optc ENSDARG00000014358 1295 1.576 0.704 0.872 - - - - - - - opticin [Source:ZFIN;Acc:ZDB-GENE-030131-1798]
16. C13H10orf71 3489 1.565 0.728 0.837 - - - - - - - chromosome 13 C10orf71 homolog
17. mcm6 ENSDARG00000057683, ENSDARG00000113317 6591 1.56 - 0.808 - - - 0.752 - - - minichromosome maintenance complex component 6 [Source:ZFIN;Acc:ZDB-GENE-030909-6]
18. daxx ENSDARG00000000729 734 1.558 - - - - - 0.779 0.779 - - death-domain associated protein [Source:ZFIN;Acc:ZDB-GENE-010110-3]
19. si:ch211-212k5.1 ENSDARG00000110637 337 1.553 - 0.795 - - - 0.758 - - - si:ch211-212k5.1 [Source:ZFIN;Acc:ZDB-GENE-110914-19]
20. eml1 ENSDARG00000042840 569 1.546 - 0.816 - - - 0.730 - - - echinoderm microtubule associated protein like 1 [Source:ZFIN;Acc:ZDB-GENE-060929-156]
21. ywhag2 ENSDARG00000071658, ENSDARG00000116741 3326 1.538 - 0.796 - - - 0.742 - - - 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-061023-2]
22. wu:fb17g07 wu:fb17g07 10567 1.53 - 0.820 - - - 0.710 - - -
23. si:ch211-243j20.2 ENSDARG00000033916 347 1.525 - 0.784 - - - 0.741 - - - si:ch211-243j20.2 [Source:ZFIN;Acc:ZDB-GENE-041014-345]
24. smyd1b ENSDARG00000091253 4964 1.514 0.750 0.764 - - - - - - - SET and MYND domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-060522-1]
25. ITGB1BP2 ENSDARG00000030176 2472 1.512 - 0.793 - - - 0.719 - - - integrin subunit beta 1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:6154]
26. ift57 ENSDARG00000021022 288 1.511 - - - - - 0.747 0.764 - - intraflagellar transport 57 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-040614-1]
27. vcl vcl 6667 1.507 0.775 0.732 - - - - - - -
28. actn3b ENSDARG00000001431 15747 1.504 0.786 0.718 - - - - - - - actinin alpha 3b [Source:ZFIN;Acc:ZDB-GENE-030131-2040]
29. cacng1 cacng1 3118 1.503 - 0.803 - 0.700 - - - - -
30. smarcd3a ENSDARG00000038786 2894 1.501 0.713 0.788 - - - - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3a [Source:ZFIN;Acc:ZDB-GENE-070912-491]
31. mrps10 ENSDARG00000045913 1453 1.5 - 0.725 - - - - 0.775 - - mitochondrial ribosomal protein S10 [Source:ZFIN;Acc:ZDB-GENE-040914-39]
32. rapsn ENSDARG00000041133, ENSDARG00000111358 1416 1.497 0.715 0.782 - - - - - - - receptor-associated protein of the synapse, 43kD [Source:ZFIN;Acc:ZDB-GENE-030313-1]
33. ITCH ITCH 1226 1.495 - 0.784 - - - - 0.711 - -
34. si:dkeyp-87e3.1 si:dkeyp-87e3.1 245 1.492 0.714 0.778 - - - - - - -
35. pdp2 ENSDARG00000058571, ENSDARG00000115915 464 1.491 - 0.768 - - - - 0.723 - - putative pyruvate dehydrogenase phosphatase isoenzyme 2 [Source:ZFIN;Acc:ZDB-GENE-000921-2]
36. cd99l2 ENSDARG00000056722 5036 1.49 - 0.714 - - - 0.776 - - - CD99 molecule-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1986]
37. CU638740.1_1 CU638740.1_1 387 1.489 - 0.704 - - - - 0.785 - -
38. syne1b ENSDARG00000063068 786 1.48 - - - - - 0.712 0.768 - - spectrin repeat containing, nuclear envelope 1b [Source:ZFIN;Acc:ZDB-GENE-071218-4]
39. zgc:153733 ENSDARG00000110325, ENSDARG00000111744, ENSDARG00000114452 176 1.478 - - - 0.735 - - 0.743 - - zgc:153733 [Source:ZFIN;Acc:ZDB-GENE-060825-273]
40. mapk12b ENSDARG00000006409 2246 1.477 - 0.762 - - - 0.715 - - - mitogen-activated protein kinase 12b [Source:ZFIN;Acc:ZDB-GENE-041210-123]
41. hes6 ENSDARG00000019335 4754 1.477 - 0.766 - - - 0.711 - - - hes family bHLH transcription factor 6 [Source:ZFIN;Acc:ZDB-GENE-030828-5]
42. flncb ENSDARG00000018820 5595 1.475 0.724 - - 0.751 - - - - - filamin C, gamma b (actin binding protein 280) [Source:ZFIN;Acc:ZDB-GENE-041008-175]
43. pbxip1a ENSDARG00000071015 4960 1.474 0.766 0.708 - - - - - - - pre-B-cell leukemia homeobox interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-060503-871]
44. vps45 ENSDARG00000061180 791 1.473 - - - - - 0.748 0.725 - - vacuolar protein sorting 45 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060503-526]
45. zcchc10 ENSDARG00000091092 1333 1.473 - - - - - 0.704 0.769 - - zinc finger, CCHC domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-030131-6172]
46. gipc1 ENSDARG00000104483 2913 1.472 - 0.725 - - - 0.747 - - - GIPC PDZ domain containing family, member 1 [Source:ZFIN;Acc:ZDB-GENE-060726-1]
47. zgc:113278 ENSDARG00000037813 525 1.471 0.714 0.757 - - - - - - - zgc:113278 [Source:ZFIN;Acc:ZDB-GENE-050327-66]
48. tmub1 ENSDARG00000038787 1012 1.469 - 0.713 - - - - 0.756 - - transmembrane and ubiquitin-like domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2504]
49. fgfr1op ENSDARG00000003058 449 1.468 0.742 - - - - - 0.726 - - FGFR1 oncogene partner [Source:ZFIN;Acc:ZDB-GENE-090417-1]
50. syt11a ENSDARG00000057913 1145 1.468 - 0.702 - - - 0.766 - - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
51. pcsk1nl ENSDARG00000076170 1232 1.464 - 0.729 - - - 0.735 - - - proprotein convertase subtilisin/kexin type 1 inhibitor, like [Source:ZFIN;Acc:ZDB-GENE-090427-2]
52. ociad1 ENSDARG00000052334 2797 1.463 0.710 - - - - - 0.753 - - OCIA domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1100]
53. NRAP ENSDARG00000009341 3565 1.458 0.753 0.705 - - - - - - - nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
54. gtf3ab ENSDARG00000071583, ENSDARG00000116242 58 1.457 - - - 0.712 - - 0.745 - - general transcription factor IIIA, b [Source:ZFIN;Acc:ZDB-GENE-030131-7698]
55. mybpc2b ENSDARG00000021265 9618 1.456 0.704 0.752 - - - - - - - myosin binding protein C, fast type b [Source:ZFIN;Acc:ZDB-GENE-050320-80]
56. vsnl1a ENSDARG00000023228 1584 1.455 - 0.706 - - - 0.749 - - - visinin-like 1a [Source:ZFIN;Acc:ZDB-GENE-041001-211]
57. zic4 ENSDARG00000031307 1228 1.454 - 0.721 - - - 0.733 - - - zic family member 4 [Source:ZFIN;Acc:ZDB-GENE-040622-4]
58. slc1a3a ENSDARG00000104431 9888 1.454 - 0.743 - - - 0.711 - - - solute carrier family 1 (glial high affinity glutamate transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2159]
59. lama4 ENSDARG00000020785 1522 1.452 0.709 - - - - 0.743 - - - laminin, alpha 4 [Source:ZFIN;Acc:ZDB-GENE-040724-213]
60. dopey1 438 1.447 - 0.723 - - - - 0.724 - - dopey family member 1, transcript variant X4
61. jagn1a ENSDARG00000041071, ENSDARG00000109427 397 1.445 - 0.702 - - - 0.743 - - - jagunal homolog 1a [Source:ZFIN;Acc:ZDB-GENE-041010-80]
62. sox2 ENSDARG00000070913 2763 1.44 - 0.710 - - - 0.730 - - - SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
63. hs3st3l ENSDARG00000059903 184 1.439 - 0.724 - - - 0.715 - - - heparan sulfate (glucosamine) 3-O-sulfotransferase 3-like [Source:ZFIN;Acc:ZDB-GENE-070202-6]
64. TUSC5 TUSC5 1436 1.438 - 0.724 - - - 0.714 - - -
65. txlnbb ENSDARG00000076241 6396 1.437 0.735 0.702 - - - - - - - taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
66. HYAL2 HYAL2 936 1.429 - 0.722 - - - - 0.707 - -
67. fstb ENSDARG00000057992, ENSDARG00000110082 518 1.422 0.710 0.712 - - - - - - - follistatin b [Source:ZFIN;Acc:ZDB-GENE-031118-139]
68. nup210 ENSDARG00000063333 995 1.406 - 0.702 - - - 0.704 - - - nucleoporin 210 [Source:ZFIN;Acc:ZDB-GENE-050208-132]
69. runx1t1 ENSDARG00000003680 633 0.921 - 0.921 - - - - - - - runt-related transcription factor 1; translocated to, 1 (cyclin D-related) [Source:ZFIN;Acc:ZDB-GENE-060929-164]
70. hspb7 ENSDARG00000104441 1417 0.907 - 0.907 - - - - - - - heat shock protein family, member 7 (cardiovascular) [Source:ZFIN;Acc:ZDB-GENE-041010-136]
71. cyb5r1 ENSDARG00000018966, ENSDARG00000112062 1017 0.902 - - - - - - 0.902 - - cytochrome b5 reductase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8497]
72. si:dkey-226k3.4 si:dkey-226k3.4 806 0.892 - 0.892 - - - - - - -
73. gpatch2 1221 0.886 - - - - - 0.886 - - - G patch domain containing 2, transcript variant X1
74. C3H19orf52 C3H19orf52 541 0.883 - 0.883 - - - - - - -
75. GIN1 GIN1 317 0.883 - 0.883 - - - - - - -
76. gli3 ENSDARG00000052131 986 0.883 - - - - - - 0.883 - - GLI family zinc finger 3 [Source:ZFIN;Acc:ZDB-GENE-041111-162]
77. lrrfip1a ENSDARG00000030012 1263 0.883 - 0.883 - - - - - - - leucine rich repeat (in FLII) interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-99]
78. myoz2a ENSDARG00000012311 1373 0.883 - 0.883 - - - - - - - myozenin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1880]
79. opa1_1 ENSDARG00000070801 1424 0.881 - - - - - 0.881 - - - optic atrophy 1 (autosomal dominant) [Source:ZFIN;Acc:ZDB-GENE-041114-7]
80. arpp21 ENSDARG00000061081 892 0.878 - 0.878 - - - - - - - cAMP-regulated phosphoprotein, 21 [Source:ZFIN;Acc:ZDB-GENE-081104-296]
81. ppp2r4 1005 0.877 - 0.877 - - - - - - - protein phosphatase 2A activator, regulatory subunit 4
82. mrps18b ENSDARG00000007065 2121 0.877 - 0.877 - - - - - - - mitochondrial ribosomal protein S18B [Source:ZFIN;Acc:ZDB-GENE-050417-278]
83. btc ENSDARG00000098112, ENSDARG00000110368 333 0.875 - 0.875 - - - - - - - betacellulin, epidermal growth factor family member [Source:ZFIN;Acc:ZDB-GENE-050311-1]
84. lgi1a ENSDARG00000020493 1218 0.874 - 0.874 - - - - - - - leucine-rich, glioma inactivated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1731]
85. exosc5 ENSDARG00000040557, ENSDARG00000113276 727 0.872 - - - - - - 0.872 - - exosome component 5 [Source:ZFIN;Acc:ZDB-GENE-060503-675]
86. drg1 ENSDARG00000039345 7545 0.872 - - - - - 0.872 - - - developmentally regulated GTP binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8767]
87. fam84a ENSDARG00000018921 375 0.869 - 0.869 - - - - - - - family with sequence similarity 84, member A [Source:ZFIN;Acc:ZDB-GENE-040426-1247]
88. MSI1 ENSDARG00000010710 478 0.868 - - - - - 0.868 - - - musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
89. cilp ENSDARG00000053362 1429 0.868 - 0.868 - - - - - - - cartilage intermediate layer protein, nucleotide pyrophosphohydrolase [Source:ZFIN;Acc:ZDB-GENE-050208-76]
90. col15a1b ENSDARG00000061848 398 0.867 - 0.867 - - - - - - - collagen, type XV, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-070912-689]
91. rhoq ENSDARG00000025953 674 0.863 - 0.863 - - - - - - - ras homolog family member Q [Source:ZFIN;Acc:ZDB-GENE-030131-5721]
92. tp53i11a ENSDARG00000069430 65 0.863 - 0.863 - - - - - - - tumor protein p53 inducible protein 11a [Source:ZFIN;Acc:ZDB-GENE-050306-58]
93. sdhaf2 ENSDARG00000062971, ENSDARG00000114840 1320 0.863 - - - - - - 0.863 - - succinate dehydrogenase complex assembly factor 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7564]
94. exd2 ENSDARG00000016117 342 0.862 - 0.862 - - - - - - - exonuclease 3'-5' domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6387]
95. acot9.2 ENSDARG00000058390, ENSDARG00000113544 438 0.86 0.860 - - - - - - - - acyl-CoA thioesterase 9, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-051113-136]
96. CABZ01090021.1 CABZ01090021.1 655 0.86 - 0.860 - - - - - - -
97. ecsit ENSDARG00000062834 896 0.859 - 0.859 - - - - - - - ECSIT signalling integrator [Source:ZFIN;Acc:ZDB-GENE-030131-1332]
98. AKIP1 ENSDARG00000069037, ENSDARG00000111207, ENSDARG00000115020 351 0.858 - - - - - - 0.858 - - A kinase (PRKA) interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-030829-24]
99. uhmk1 ENSDARG00000059575 1486 0.857 - - - - - 0.857 - - - U2AF homology motif (UHM) kinase 1 [Source:ZFIN;Acc:ZDB-GENE-060929-1014]
100. zgc:195001 ENSDARG00000070484 3281 0.856 - 0.856 - - - - - - - zgc:195001 [Source:ZFIN;Acc:ZDB-GENE-081022-173]

There are 1279 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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