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Results for six3b

Gene Name Gene ID Reads Annotation
six3b ENSDARG00000054879 2416 SIX homeobox 3b [Source:ZFIN;Acc:ZDB-GENE-990415-128]










Genes with expression patterns similar to six3b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. six3b ENSDARG00000054879 2416 5 - - 1.000 1.000 1.000 - - 1.000 1.000 SIX homeobox 3b [Source:ZFIN;Acc:ZDB-GENE-990415-128]
2. vax1 ENSDARG00000021916, ENSDARG00000114230 152 3.036 - - 0.728 0.746 - - - 0.787 0.775 ventral anterior homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030904-9]
3. BX324132.5 BX324132.5 115 3.023 - - 0.782 0.796 - - - 0.735 0.710
4. six6b ENSDARG00000031316 132 2.594 - - 0.769 0.926 - - - 0.899 - SIX homeobox 6b [Source:ZFIN;Acc:ZDB-GENE-050522-308]
5. rorb ENSDARG00000033498 544 2.532 - - 0.708 - - - - 0.924 0.900 RAR-related orphan receptor B [Source:ZFIN;Acc:ZDB-GENE-061204-2]
6. fzd5 ENSDARG00000025420 1082 2.477 - - 0.821 - - - - 0.796 0.860 frizzled class receptor 5 [Source:ZFIN;Acc:ZDB-GENE-990415-218]
7. rx2 ENSDARG00000040321 112 2.472 - - - 0.771 - - - 0.818 0.883 retinal homeobox gene 2 [Source:ZFIN;Acc:ZDB-GENE-990415-237]
8. ahr1b ENSDARG00000023537 44 2.422 - - 0.747 - - - - 0.808 0.867 aryl hydrocarbon receptor 1b [Source:ZFIN;Acc:ZDB-GENE-050922-1]
9. foxg1b ENSDARG00000032705 354 2.42 - - - 0.763 - - - 0.769 0.888 forkhead box G1b [Source:ZFIN;Acc:ZDB-GENE-040426-2437]
10. nkx2.1b nkx2.1b 125 2.355 - - 0.724 - - - - 0.860 0.771
11. fezf1 ENSDARG00000010270 379 2.245 - - 0.721 0.804 - - - - 0.720 FEZ family zinc finger 1 [Source:ZFIN;Acc:ZDB-GENE-060929-970]
12. nbeaa ENSDARG00000070080 862 2.239 - - - 0.737 - - - 0.768 0.734 neurobeachin a [Source:ZFIN;Acc:ZDB-GENE-050320-68]
13. six3a ENSDARG00000058008, ENSDARG00000114971 586 1.902 - - 0.928 0.974 - - - - - SIX homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-990415-127]
14. rx1 ENSDARG00000071684 247 1.863 - - - - - - - 0.959 0.904 retinal homeobox gene 1 [Source:ZFIN;Acc:ZDB-GENE-990415-236]
15. ndrg1b ENSDARG00000010420 116 1.857 - - - - - - - 0.956 0.901 N-myc downstream regulated 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1648]
16. cspg5b ENSDARG00000099793 67 1.841 - - - - - - - 0.925 0.916 chondroitin sulfate proteoglycan 5b [Source:ZFIN;Acc:ZDB-GENE-060503-368]
17. atoh7 ENSDARG00000069552 254 1.832 - - - - - - - 0.886 0.946 atonal bHLH transcription factor 7 [Source:ZFIN;Acc:ZDB-GENE-000926-1]
18. pmelb ENSDARG00000033760 206 1.822 - - - - - - - 0.943 0.879 premelanosome protein b [Source:ZFIN;Acc:ZDB-GENE-050912-2]
19. hes2.2 ENSDARG00000068168 197 1.798 - - - - - - - 0.884 0.914 hes family bHLH transcription factor 2, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060825-55]
20. zgc:158291 ENSDARG00000044375, ENSDARG00000111929 621 1.781 - - - - - - - 0.905 0.876 zgc:158291 [Source:ZFIN;Acc:ZDB-GENE-061215-70]
21. MLLT4 MLLT4 67 1.769 - - - - - - - 0.910 0.859
22. msnb ENSDARG00000028740, ENSDARG00000109311, ENSDARG00000110190 24 1.72 - - - - - - - 0.833 0.887 moesin b [Source:ZFIN;Acc:ZDB-GENE-030717-7]
23. hmx1 ENSDARG00000095651, ENSDARG00000109725, ENSDARG00000111765 151 1.711 - - - - - - - 0.859 0.852 H6 family homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-080204-54]
24. si:dkey-21o19.2 ENSDARG00000088900 52 1.706 - - - - - - - 0.863 0.843 si:dkey-21o19.2 [Source:ZFIN;Acc:ZDB-GENE-090313-241]
25. vsx1 ENSDARG00000056292, ENSDARG00000109766 442 1.704 - - - - - - - 0.887 0.817 visual system homeobox 1 homolog, chx10-like [Source:ZFIN;Acc:ZDB-GENE-990415-205]
26. zbtb18 ENSDARG00000028228 3653 1.674 - - - - - - - 0.830 0.844 zinc finger and BTB domain containing 18 [Source:ZFIN;Acc:ZDB-GENE-050419-73]
27. otx2 766 1.671 - - - - - - - 0.836 0.835 orthodenticle homeobox 2, transcript variant X2
28. vsx2 ENSDARG00000005574 102 1.648 - - - - - - - 0.779 0.869 visual system homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-001222-1]
29. mybl1 ENSDARG00000030999 158 1.632 - - - - - - - 0.831 0.801 v-myb avian myeloblastosis viral oncogene homolog-like 1 [Source:ZFIN;Acc:ZDB-GENE-041111-281]
30. prdm1b ENSDARG00000098925 440 1.623 - - - 0.751 - - - - 0.872 PR domain containing 1b, with ZNF domain [Source:ZFIN;Acc:ZDB-GENE-080618-2]
31. slc6a1a ENSDARG00000045944 260 1.613 - - - - - - - 0.823 0.790 solute carrier family 6 (neurotransmitter transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-060519-23]
32. cyp1b1 ENSDARG00000068934, ENSDARG00000113835 196 1.607 - - - - - - - 0.842 0.765 cytochrome P450, family 1, subfamily B, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030902-1]
33. wu:fc51f04 wu:fc51f04 7074 1.599 - - - - - - - 0.784 0.815
34. lhx2b ENSDARG00000031222 517 1.593 - - 0.757 0.836 - - - - - LIM homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-051220-1]
35. defbl1 ENSDARG00000075161 211 1.586 - - - - - - - 0.799 0.787 defensin, beta-like 1 [Source:ZFIN;Acc:ZDB-GENE-070207-1]
36. cxxc4 ENSDARG00000077817 197 1.576 - - - - - - - 0.839 0.737 CXXC finger 4 [Source:ZFIN;Acc:ZDB-GENE-090313-179]
37. sprn2 ENSDARG00000057665, ENSDARG00000115640 69 1.573 - - - 0.839 - - - 0.734 - shadow of prion protein 2 [Source:ZFIN;Acc:ZDB-GENE-041221-1]
38. nkx2.1a nkx2.1a 156 1.563 - - 0.813 0.750 - - - - -
39. pax6l pax6l 54 1.551 - - - - - - - 0.779 0.772
40. amer2 ENSDARG00000075222 594 1.543 - - - 0.773 - - - - 0.770 APC membrane recruitment protein 2 [Source:ZFIN;Acc:ZDB-GENE-070719-5]
41. zgc:109889 ENSDARG00000069600, ENSDARG00000113538 554 1.543 - - - - - - - 0.814 0.729 zgc:109889 [Source:ZFIN;Acc:ZDB-GENE-050522-547]
42. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 1.532 - - - - - - - 0.735 0.797 cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
43. pitx3 ENSDARG00000070069 363 1.526 - - 0.771 - - - - - 0.755 paired-like homeodomain 3 [Source:ZFIN;Acc:ZDB-GENE-041229-4]
44. celf3a ENSDARG00000034668 2432 1.525 - - - - - - - 0.747 0.778 cugbp, Elav-like family member 3a [Source:ZFIN;Acc:ZDB-GENE-000501-2]
45. hmx4 ENSDARG00000007941, ENSDARG00000115000, ENSDARG00000116208 447 1.508 - - - 0.709 - - - - 0.799 H6 family homeobox 4 [Source:ZFIN;Acc:ZDB-GENE-060825-142]
46. hmgb1a ENSDARG00000099175, ENSDARG00000114353 17231 1.507 - - - - - - - 0.764 0.743 high mobility group box 1a [Source:ZFIN;Acc:ZDB-GENE-030131-341]
47. dlx1a ENSDARG00000013125 142 1.504 - - - 0.730 - - - - 0.774 distal-less homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-990415-48]
48. vax2 ENSDARG00000058702 175 1.501 - - 0.770 0.731 - - - - - ventral anterior homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-030904-8]
49. gas7a ENSDARG00000074443, ENSDARG00000111294 250 1.486 - - - 0.745 - - - 0.741 - growth arrest-specific 7a [Source:ZFIN;Acc:ZDB-GENE-130128-1]
50. nkx2.2a ENSDARG00000053298 747 1.484 - - 0.719 0.765 - - - - - NK2 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-403]
51. negr1 ENSDARG00000021607 1051 1.481 - - - 0.762 - - - - 0.719 neuronal growth regulator 1 [Source:ZFIN;Acc:ZDB-GENE-040822-27]
52. foxg1a ENSDARG00000070769 928 1.48 - - - 0.758 - - - - 0.722 forkhead box G1a [Source:ZFIN;Acc:ZDB-GENE-990415-267]
53. gpr85 ENSDARG00000068701, ENSDARG00000116501 372 1.475 - - - 0.774 - - - - 0.701 G protein-coupled receptor 85 [Source:ZFIN;Acc:ZDB-GENE-000710-2]
54. bcl11ab ENSDARG00000063153 3032 1.463 - - - 0.761 - - - - 0.702 B cell CLL/lymphoma 11Ab [Source:ZFIN;Acc:ZDB-GENE-061009-4]
55. slc38a3a ENSDARG00000027065, ENSDARG00000112018 95 1.463 - - - - - - - 0.747 0.716 solute carrier family 38, member 3a [Source:ZFIN;Acc:ZDB-GENE-070615-25]
56. fam60al 2846 1.462 - - - - - - - 0.741 0.721 family with sequence similarity 60, member A, like
57. gpr37l1b ENSDARG00000056774, ENSDARG00000114481 143 1.443 - - - - - - - 0.723 0.720 G protein-coupled receptor 37 like 1b [Source:ZFIN;Acc:ZDB-GENE-081104-324]
58. si:dkey-235h8.1 si:dkey-235h8.1 2457 1.428 - - 0.703 - - - - 0.725 -
59. lphn3.1 lphn3.1 756 1.427 - - - - - - - 0.704 0.723
60. ephb2b ENSDARG00000021539 521 1.418 - - - 0.706 - - - - 0.712 eph receptor B2b [Source:ZFIN;Acc:ZDB-GENE-050522-415]
61. mrps25 ENSDARG00000041306 3654 1 - - - - 1.000 - - - - mitochondrial ribosomal protein S25 [Source:ZFIN;Acc:ZDB-GENE-050417-52]
62. nip7 ENSDARG00000059075 3964 1 - - - - 1.000 - - - - NIP7, nucleolar pre-rRNA processing protein [Source:ZFIN;Acc:ZDB-GENE-050522-256]
63. ncalda ENSDARG00000070688 5069 1 - - - - 1.000 - - - - neurocalcin delta a [Source:ZFIN;Acc:ZDB-GENE-080220-28]
64. taf9 ENSDARG00000077870 6992 1 - - - - 1.000 - - - - TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-204]
65. nrp2a_1 ENSDARG00000096546 3358 1 - - - - 1.000 - - - - neuropilin 2a [Source:ZFIN;Acc:ZDB-GENE-040611-2]
66. snap25a ENSDARG00000020609 4537 1 - - - - 1.000 - - - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
67. pcgf6 ENSDARG00000069681 2382 1 - - - - 1.000 - - - - polycomb group ring finger 6 [Source:ZFIN;Acc:ZDB-GENE-060526-178]
68. si:dkey-191j3.3 si:dkey-191j3.3 1987 1 - - - - 1.000 - - - -
69. sh3kbp1 ENSDARG00000075853 2838 1 - - - - 1.000 - - - - SH3-domain kinase binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-091204-186]
70. acyp1 ENSDARG00000060126 2161 1 - - - - 1.000 - - - - acylphosphatase 1, erythrocyte (common) type [Source:ZFIN;Acc:ZDB-GENE-050309-125]
71. ndrg3b ENSDARG00000010052, ENSDARG00000109420 3951 1 - - - - 1.000 - - - - ndrg family member 3b [Source:ZFIN;Acc:ZDB-GENE-030131-5606]
72. C25H1orf51 C25H1orf51 2460 1 - - - - 1.000 - - - -
73. rbb4 rbb4 15541 0.999 - - - - 0.999 - - - -
74. ptprnb ENSDARG00000077047 2743 0.999 - - - - 0.999 - - - - protein tyrosine phosphatase, receptor type, Nb [Source:ZFIN;Acc:ZDB-GENE-100505-1]
75. tegt ENSDARG00000077934 27182 0.999 - - - - 0.999 - - - - testis enhanced gene transcript (BAX inhibitor 1) [Source:ZFIN;Acc:ZDB-GENE-030826-10]
76. ppp5c ENSDARG00000034313 8794 0.999 - - - - 0.999 - - - - protein phosphatase 5, catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-050327-75]
77. rpl13a ENSDARG00000044093, ENSDARG00000116541 10473 0.999 - - - - 0.999 - - - - ribosomal protein L13a [Source:ZFIN;Acc:ZDB-GENE-030131-168]
78. phgdh ENSDARG00000001873 8325 0.999 - - - - 0.999 - - - - phosphoglycerate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030131-647]
79. furina ENSDARG00000062909, ENSDARG00000117158 6313 0.999 - - - - 0.999 - - - - furin (paired basic amino acid cleaving enzyme) a [Source:ZFIN;Acc:ZDB-GENE-040901-1]
80. FOXK2 ENSDARG00000030583 5500 0.997 - - - - 0.997 - - - - forkhead box K2 [Source:ZFIN;Acc:ZDB-GENE-030131-2861]
81. atp5h 18018 0.997 - - - - 0.997 - - - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit d, transcript variant X1
82. uqcrq ENSDARG00000029064, ENSDARG00000116372 32190 0.997 - - - - 0.997 - - - - ubiquinol-cytochrome c reductase, complex III subunit VII [Source:ZFIN;Acc:ZDB-GENE-040718-199]
83. anxa1a ENSDARG00000026726 23173 0.997 - - - - 0.997 - - - - annexin A1a [Source:ZFIN;Acc:ZDB-GENE-030131-6664]
84. anp32b ENSDARG00000023330 25013 0.995 - - - - 0.995 - - - - acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:ZFIN;Acc:ZDB-GENE-030131-719]
85. vps35 ENSDARG00000008224 13245 0.992 - - - - 0.992 - - - - vacuolar protein sorting 35 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-2042]
86. zgc:158409 zgc:158409 21963 0.992 - - - - 0.992 - - - -
87. fbxo28 ENSDARG00000027159 9602 0.99 - - - - 0.990 - - - - F-box protein 28 [Source:ZFIN;Acc:ZDB-GENE-030131-4665]
88. sap130a ENSDARG00000056924 3156 0.989 - - - - 0.989 - - - - Sin3A-associated protein a [Source:ZFIN;Acc:ZDB-GENE-070615-5]
89. znf706 ENSDARG00000056307 12518 0.988 - - - - 0.988 - - - - zinc finger protein 706 [Source:ZFIN;Acc:ZDB-GENE-040718-454]
90. atp5g1 51897 0.977 - - - - 0.977 - - - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)
91. rpl27 ENSDARG00000015128 108038 0.977 - - - - 0.977 - - - - ribosomal protein L27 [Source:ZFIN;Acc:ZDB-GENE-030131-4343]
92. capns1b ENSDARG00000013804 37726 0.972 - - - - 0.972 - - - - calpain, small subunit 1 b [Source:ZFIN;Acc:ZDB-GENE-030131-5206]
93. sept4a ENSDARG00000010385 75 0.967 - - - - - - - 0.967 - septin 4a [Source:ZFIN;Acc:ZDB-GENE-051120-87]
94. uba52 ENSDARG00000041435 50415 0.959 - - - - 0.959 - - - - ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:ZFIN;Acc:ZDB-GENE-051023-7]
95. zgc:92533 zgc:92533 141172 0.948 - - - - 0.948 - - - -
96. ccnd1 ENSDARG00000101637 34762 0.944 - - - - 0.944 - - - - cyclin D1 [Source:ZFIN;Acc:ZDB-GENE-980526-176]
97. rps15a ENSDARG00000010160 94499 0.923 - - - - 0.923 - - - - ribosomal protein S15a [Source:ZFIN;Acc:ZDB-GENE-030131-8708]
98. fabp11b ENSDARG00000002311 354 0.92 - - - - - - - - 0.920 fatty acid binding protein 11b [Source:ZFIN;Acc:ZDB-GENE-050522-391]
99. grifin ENSDARG00000033382 141 0.918 - - - - - - - 0.918 - galectin-related inter-fiber protein [Source:ZFIN;Acc:ZDB-GENE-040801-163]
100. crx ENSDARG00000011989, ENSDARG00000113850 330 0.915 - - - - - - - 0.915 - cone-rod homeobox [Source:ZFIN;Acc:ZDB-GENE-010403-1]

There are 299 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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