Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for six2a

Gene Name Gene ID Reads Annotation
six2a ENSDARG00000058004, ENSDARG00000115214 414 SIX homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-010412-1]










Genes with expression patterns similar to six2a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. six2a ENSDARG00000058004, ENSDARG00000115214 414 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SIX homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-010412-1]
2. slc30a1a ENSDARG00000005463 1011 2.171 - 0.705 - 0.739 - 0.727 - - - solute carrier family 30 (zinc transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1840]
3. rnf34a ENSDARG00000038300 179 1.833 - 0.953 - - - 0.880 - - - ring finger protein 34a [Source:ZFIN;Acc:ZDB-GENE-030131-6135]
4. f7 ENSDARG00000034862 405 1.824 - 0.948 - - - 0.876 - - - coagulation factor VII [Source:ZFIN;Acc:ZDB-GENE-010814-1]
5. cacng6a ENSDARG00000036457 344 1.806 0.842 0.964 - - - - - - - calcium channel, voltage-dependent, gamma subunit 6a [Source:ZFIN;Acc:ZDB-GENE-060503-440]
6. ormdl2 ENSDARG00000058022 1146 1.801 - 0.974 - 0.827 - - - - - ORMDL sphingolipid biosynthesis regulator 2 [Source:ZFIN;Acc:ZDB-GENE-060331-113]
7. wnt7aa ENSDARG00000044827 645 1.79 - 0.914 - 0.876 - - - - - wingless-type MMTV integration site family, member 7Aa [Source:ZFIN;Acc:ZDB-GENE-051129-1]
8. ddx31 ENSDARG00000035507 167 1.763 - - - 0.921 - 0.842 - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 31 [Source:ZFIN;Acc:ZDB-GENE-030131-3973]
9. casp3b ENSDARG00000055045 54 1.757 0.799 0.958 - - - - - - - caspase 3, apoptosis-related cysteine peptidase b [Source:ZFIN;Acc:ZDB-GENE-070607-1]
10. si:dkeyp-123a12.2 ENSDARG00000115029 78 1.746 0.796 0.950 - - - - - - - si:dkeyp-123a12.2 [Source:ZFIN;Acc:ZDB-GENE-041210-271]
11. FRRS1_1 FRRS1_1 831 1.746 - 0.906 - 0.840 - - - - -
12. ube3c ENSDARG00000035978, ENSDARG00000112229 787 1.737 - 0.936 - 0.801 - - - - - ubiquitin protein ligase E3C [Source:ZFIN;Acc:ZDB-GENE-040426-1211]
13. calhm2 ENSDARG00000039482 138 1.734 0.832 - - 0.902 - - - - - calcium homeostasis modulator 2 [Source:ZFIN;Acc:ZDB-GENE-030616-561]
14. serpine2 ENSDARG00000029353 2274 1.729 - 0.916 - - - 0.813 - - - serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-848]
15. GLTPD2 ENSDARG00000067889, ENSDARG00000114510 320 1.723 - 0.948 - - - 0.775 - - - glycolipid transfer protein domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060526-346]
16. tmem184c ENSDARG00000078789, ENSDARG00000111570 395 1.718 - - - 0.890 - 0.828 - - - transmembrane protein 184C [Source:ZFIN;Acc:ZDB-GENE-090312-89]
17. plekhg6 ENSDARG00000086056 368 1.692 - 0.972 0.720 - - - - - - pleckstrin homology domain containing, family G (with RhoGef domain) member 6 [Source:ZFIN;Acc:ZDB-GENE-030131-2517]
18. wdr37 ENSDARG00000074611 468 1.68 0.756 0.924 - - - - - - - WD repeat domain 37 [Source:ZFIN;Acc:ZDB-GENE-030131-8101]
19. rnf141 ENSDARG00000041802, ENSDARG00000113109 531 1.676 - 0.866 - 0.810 - - - - - ring finger protein 141 [Source:ZFIN;Acc:ZDB-GENE-040625-71]
20. cmc1 ENSDARG00000103670 1197 1.663 - 0.771 - 0.892 - - - - - C-x(9)-C motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2626]
21. abt1 ENSDARG00000043666 345 1.639 - 0.862 - - - 0.777 - - - activator of basal transcription 1 [Source:ZFIN;Acc:ZDB-GENE-050522-127]
22. zgc:158374 zgc:158374 2227 1.626 - 0.813 - - - 0.813 - - -
23. clec16a ENSDARG00000038094 501 1.613 0.734 - - 0.879 - - - - - C-type lectin domain containing 16A [Source:ZFIN;Acc:ZDB-GENE-040426-951]
24. sult2st2 ENSDARG00000103785 370 1.602 - 0.867 - - - 0.735 - - - sulfotransferase family 2, cytosolic sulfotransferase 2 [Source:ZFIN;Acc:ZDB-GENE-061117-5]
25. slc48a1b ENSDARG00000026109 1427 1.599 - 0.893 - - - 0.706 - - - solute carrier family 48 (heme transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8226]
26. BX548078.1 ENSDARG00000093780 1325 1.59 - 0.789 - - - 0.801 - - -
27. mcoln1a ENSDARG00000002285 639 1.586 - 0.702 - - - 0.884 - - - mucolipin 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2704]
28. mul1a ENSDARG00000021398 438 1.584 - - - 0.831 - - 0.753 - - mitochondrial E3 ubiquitin protein ligase 1a [Source:ZFIN;Acc:ZDB-GENE-050102-5]
29. znf622 ENSDARG00000014692 921 1.583 - 0.834 - - - 0.749 - - - zinc finger protein 622 [Source:ZFIN;Acc:ZDB-GENE-050927-1]
30. acvrl1 ENSDARG00000018179 308 1.57 0.788 - - - - 0.782 - - - activin A receptor like type 1 [Source:ZFIN;Acc:ZDB-GENE-021003-1]
31. spopla ENSDARG00000010563 775 1.567 - - - 0.835 - - - - 0.732 speckle-type POZ protein-like a [Source:ZFIN;Acc:ZDB-GENE-050320-3]
32. man2b1 ENSDARG00000001897 1042 1.564 - 0.709 - - - 0.855 - - - mannosidase, alpha, class 2B, member 1 [Source:ZFIN;Acc:ZDB-GENE-050327-52]
33. zgc:92380 ENSDARG00000041339 1867 1.557 - 0.795 - - - 0.762 - - - zgc:92380 [Source:ZFIN;Acc:ZDB-GENE-040801-221]
34. egfl7 ENSDARG00000100657 776 1.557 - 0.819 - 0.738 - - - - - EGF-like-domain, multiple 7 [Source:ZFIN;Acc:ZDB-GENE-040429-2]
35. Mar-06 Mar-06 953 1.555 - - - 0.760 - 0.795 - - -
36. tubgcp4 ENSDARG00000005374 208 1.555 0.765 - - - - - 0.790 - - tubulin, gamma complex associated protein 4 [Source:ZFIN;Acc:ZDB-GENE-081022-124]
37. ptpra ENSDARG00000001769, ENSDARG00000114615 1279 1.535 - 0.756 - 0.779 - - - - - protein tyrosine phosphatase, receptor type, A [Source:ZFIN;Acc:ZDB-GENE-020107-1]
38. esrrga ENSDARG00000004861 805 1.534 - - - - - - - 0.709 0.825 estrogen-related receptor gamma a [Source:ZFIN;Acc:ZDB-GENE-030821-2]
39. hp_1 ENSDARG00000051890, ENSDARG00000095807 1049 1.53 - 0.739 - - - 0.791 - - - haptoglobin [Source:ZFIN;Acc:ZDB-GENE-030131-1259]
40. mst1 ENSDARG00000103308 581 1.527 - 0.744 - - - 0.783 - - - macrophage stimulating 1 [Source:ZFIN;Acc:ZDB-GENE-020806-3]
41. usp39 ENSDARG00000041908 501 1.525 - - - 0.817 - - - - 0.708 ubiquitin specific peptidase 39 [Source:ZFIN;Acc:ZDB-GENE-030131-966]
42. amdhd2 ENSDARG00000100376 656 1.508 - 0.804 - - - 0.704 - - - amidohydrolase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1871]
43. dhx34 ENSDARG00000061168 349 1.503 0.701 - - 0.802 - - - - - DEAH (Asp-Glu-Ala-His) box polypeptide 34 [Source:ZFIN;Acc:ZDB-GENE-061207-30]
44. C24H11orf54 C24H11orf54 719 1.487 - 0.706 - - - 0.781 - - -
45. rhbg ENSDARG00000009018 1131 1.483 - 0.763 - - - 0.720 - - - Rh family, B glycoprotein (gene/pseudogene) [Source:ZFIN;Acc:ZDB-GENE-030131-9542]
46. irs1 ENSDARG00000054087 1809 1.483 0.700 - - 0.783 - - - - - insulin receptor substrate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-872]
47. eva1a ENSDARG00000061405 896 1.479 - 0.744 - 0.735 - - - - - eva-1 homolog A (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-060929-200]
48. dnajb6b ENSDARG00000020953, ENSDARG00000110048 446 1.455 0.750 - 0.705 - - - - - - DnaJ (Hsp40) homolog, subfamily B, member 6b [Source:ZFIN;Acc:ZDB-GENE-040426-1122]
49. polr2f ENSDARG00000036625, ENSDARG00000110198 1330 1.428 - 0.722 - 0.706 - - - - - polymerase (RNA) II (DNA directed) polypeptide F [Source:ZFIN;Acc:ZDB-GENE-040718-279]
50. HPS6 265 1.416 0.715 - 0.701 - - - - - - HPS6, biogenesis of lysosomal organelles complex 2 subunit 3
51. ugt5a5 807 1.415 - 0.710 - - - 0.705 - - - UDP glucuronosyltransferase 5 family, polypeptide A5
52. itgb4 ENSDARG00000028507 2568 1.408 - 0.707 - 0.701 - - - - - integrin, beta 4 [Source:ZFIN;Acc:ZDB-GENE-030131-7209]
53. si:ch211-215d8.2 ENSDARG00000093233 784 0.993 - 0.993 - - - - - - - si:ch211-215d8.2 [Source:ZFIN;Acc:ZDB-GENE-050419-248]
54. acad11 ENSDARG00000045411 350 0.988 - 0.988 - - - - - - - acyl-CoA dehydrogenase family, member 11 [Source:ZFIN;Acc:ZDB-GENE-040426-814]
55. unc13d ENSDARG00000078249 91 0.986 - 0.986 - - - - - - - unc-13 homolog D (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-110411-188]
56. nipsnap1 ENSDARG00000005320 330 0.98 - 0.980 - - - - - - - nipsnap homolog 1 (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-991008-17]
57. gbx2 ENSDARG00000002933, ENSDARG00000116377 633 0.976 - 0.976 - - - - - - - gastrulation brain homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-020509-2]
58. TM2D2 ENSDARG00000035515 561 0.976 - 0.976 - - - - - - - TM2 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040718-387]
59. cox7a1 ENSDARG00000069464, ENSDARG00000112682 243 0.974 - 0.974 - - - - - - - cytochrome c oxidase subunit 7A1 [Source:ZFIN;Acc:ZDB-GENE-060929-340]
60. pc pc 116 0.974 - 0.974 - - - - - - -
61. si:dkey-114b16.4 si:dkey-114b16.4 35 0.973 - 0.973 - - - - - - -
62. CT573322.1 CT573322.1 38 0.972 - 0.972 - - - - - - -
63. uevld ENSDARG00000009266, ENSDARG00000116754 377 0.972 - 0.972 - - - - - - - UEV and lactate/malate dehyrogenase domains [Source:ZFIN;Acc:ZDB-GENE-040801-138]
64. usp45 ENSDARG00000075013 227 0.971 - 0.971 - - - - - - - ubiquitin specific peptidase 45 [Source:ZFIN;Acc:ZDB-GENE-100211-2]
65. U3_5 U3_5 67 0.971 - 0.971 - - - - - - -
66. si:dkey-228i19.34 si:dkey-228i19.34 43 0.971 - 0.971 - - - - - - -
67. si:ch211-39a7.1 ENSDARG00000037427 31 0.971 - 0.971 - - - - - - - si:ch211-39a7.1 [Source:ZFIN;Acc:ZDB-GENE-060503-606]
68. SLC38A9 ENSDARG00000032769 35 0.971 - 0.971 - - - - - - - solute carrier family 38, member 9 [Source:ZFIN;Acc:ZDB-GENE-061013-597]
69. ZP2 ZP2 14 0.971 - 0.971 - - - - - - -
70. CABZ01109624.1 CABZ01109624.1 25 0.971 - 0.971 - - - - - - -
71. cyp2aa1 ENSDARG00000099003 297 0.971 - 0.971 - - - - - - - cytochrome P450, family 2, subfamily AA, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-070424-33]
72. si:ch1073-155h21.1 ENSDARG00000007582 137 0.971 - 0.971 - - - - - - - si:ch1073-155h21.1 [Source:ZFIN;Acc:ZDB-GENE-030131-2664]
73. gemin4 ENSDARG00000041252, ENSDARG00000115829 226 0.97 - 0.970 - - - - - - - gem (nuclear organelle) associated protein 4 [Source:ZFIN;Acc:ZDB-GENE-050522-188]
74. ppapdc2 ppapdc2 67 0.97 - 0.970 - - - - - - -
75. si:ch211-105d18.6 si:ch211-105d18.6 59 0.97 - 0.970 - - - - - - -
76. MAP3K2 ENSDARG00000062884 34 0.97 - 0.970 - - - - - - - mitogen-activated protein kinase kinase kinase 2 [Source:ZFIN;Acc:ZDB-GENE-120215-96]
77. unc93a ENSDARG00000041554 427 0.97 - 0.970 - - - - - - - unc-93 homolog A [Source:ZFIN;Acc:ZDB-GENE-041014-304]
78. cd74a ENSDARG00000009087 20 0.969 - 0.969 - - - - - - - CD74 molecule, major histocompatibility complex, class II invariant chain a [Source:ZFIN;Acc:ZDB-GENE-000901-1]
79. gfi1ab ENSDARG00000044457, ENSDARG00000114140 125 0.969 - 0.969 - - - - - - - growth factor independent 1A transcription repressor b [Source:ZFIN;Acc:ZDB-GENE-040116-8]
80. UBASH3B UBASH3B 292 0.969 - 0.969 - - - - - - -
81. zgc:109744 ENSDARG00000070800 262 0.969 - 0.969 - - - - - - - zgc:109744 [Source:ZFIN;Acc:ZDB-GENE-050809-146]
82. neil3 ENSDARG00000020079, ENSDARG00000111296 397 0.968 - 0.968 - - - - - - - nei-like DNA glycosylase 3 [Source:ZFIN;Acc:ZDB-GENE-041114-18]
83. CABZ01066717.1 CABZ01066717.1 351 0.968 - 0.968 - - - - - - -
84. CR388047.3 ENSDARG00000117023 89 0.968 - 0.968 - - - - - - -
85. foxn4 ENSDARG00000010591 2332 0.967 - 0.967 - - - - - - - forkhead box N4 [Source:ZFIN;Acc:ZDB-GENE-990415-277]
86. kcnk13a ENSDARG00000008212 136 0.967 - 0.967 - - - - - - - potassium channel, subfamily K, member 13a [Source:ZFIN;Acc:ZDB-GENE-080219-46]
87. smdt1 smdt1 99 0.967 - 0.967 - - - - - - -
88. si:dkey-154p10.3 ENSDARG00000068366 153 0.967 - 0.967 - - - - - - - si:dkey-154p10.3 [Source:ZFIN;Acc:ZDB-GENE-070912-380]
89. kcnj1a.4 ENSDARG00000090635 356 0.966 - 0.966 - - - - - - - potassium inwardly-rectifying channel, subfamily J, member 1a, tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-050420-186]
90. fam57ba ENSDARG00000026875 504 0.966 - 0.966 - - - - - - - family with sequence similarity 57, member Ba [Source:ZFIN;Acc:ZDB-GENE-030131-2046]
91. C12H10orf2 C12H10orf2 245 0.966 - 0.966 - - - - - - -
92. plce1 ENSDARG00000087921 44 0.966 - 0.966 - - - - - - - phospholipase C, epsilon 1 [Source:ZFIN;Acc:ZDB-GENE-061212-4]
93. rab33ba ENSDARG00000052290 914 0.965 - 0.965 - - - - - - - RAB33B, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-050809-122]
94. pgap2 ENSDARG00000044596 60 0.965 - 0.965 - - - - - - - post-GPI attachment to proteins 2 [Source:ZFIN;Acc:ZDB-GENE-050320-119]
95. NUDT8 ENSDARG00000007722 329 0.965 - 0.965 - - - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 8 [Source:ZFIN;Acc:ZDB-GENE-061013-219]
96. grk5 ENSDARG00000032801 490 0.965 - 0.965 - - - - - - - G protein-coupled receptor kinase 5 [Source:ZFIN;Acc:ZDB-GENE-091204-274]
97. TEAD1 TEAD1 43 0.964 - 0.964 - - - - - - -
98. fam63b 484 0.963 - 0.963 - - - - - - - family with sequence similarity 63, member B
99. rmdn3 ENSDARG00000041407, ENSDARG00000116827 149 0.962 - 0.962 - - - - - - - regulator of microtubule dynamics 3 [Source:ZFIN;Acc:ZDB-GENE-041014-256]
100. CABZ01114089.1 CABZ01114089.1 127 0.962 - 0.962 - - - - - - -

There are 1204 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA