Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for six1b

Gene Name Gene ID Reads Annotation
six1b ENSDARG00000026473 1908 SIX homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2308]










Genes with expression patterns similar to six1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. six1b ENSDARG00000026473 1908 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SIX homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2308]
2. cacng1 cacng1 3118 3.319 0.758 0.929 - - - 0.778 0.854 - -
3. MYOT ENSDARG00000076312 1791 3.298 0.702 0.885 - - - 0.770 0.941 - - myotilin [Source:ZFIN;Acc:ZDB-GENE-110411-129]
4. fitm1 ENSDARG00000056464 1759 3.271 0.725 0.836 - - - 0.804 0.906 - - fat storage-inducing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-050306-28]
5. gypc ENSDARG00000041546 1487 3.238 0.719 0.869 - - - 0.799 0.851 - - glycophorin C (Gerbich blood group) [Source:ZFIN;Acc:ZDB-GENE-030131-7930]
6. chrna1 ENSDARG00000009021 2931 3.211 0.701 0.857 - - - 0.759 0.894 - - cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
7. EHBP1L1 EHBP1L1 2500 3.166 0.704 0.818 - - - 0.705 0.939 - -
8. eya1 ENSDARG00000014259, ENSDARG00000116267 5111 3.14 0.796 0.759 - - - 0.816 0.769 - - EYA transcriptional coactivator and phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-990712-18]
9. ATP5J_2 ATP5J_2 2381 3.107 0.757 0.726 - - - 0.742 0.882 - -
10. tmem47 ENSDARG00000057322 4691 2.674 - 0.837 0.988 - - - 0.849 - - transmembrane protein 47 [Source:ZFIN;Acc:ZDB-GENE-040426-2644]
11. myoz2a ENSDARG00000012311 1373 2.674 - 0.871 - - - 0.860 0.943 - - myozenin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1880]
12. sh3bgr ENSDARG00000021633 3498 2.672 - 0.818 - - - 0.952 0.902 - - SH3 domain binding glutamate-rich protein [Source:ZFIN;Acc:ZDB-GENE-040801-27]
13. MYOM3 2720 2.657 - 0.942 - - - 0.786 0.929 - - myomesin 3, transcript variant X2
14. zgc:158296 ENSDARG00000070923 3935 2.602 - 0.880 - - - 0.842 0.880 - - zgc:158296 [Source:ZFIN;Acc:ZDB-GENE-070112-1272]
15. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 2.601 - 0.895 - - - 0.796 0.910 - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
16. ryr3 ENSDARG00000071331 6795 2.588 - 0.823 - - - 0.837 0.928 - - ryanodine receptor 3 [Source:ZFIN;Acc:ZDB-GENE-041001-165]
17. txlnbb ENSDARG00000076241 6396 2.585 - 0.850 - - - 0.859 0.876 - - taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
18. vwde ENSDARG00000103443 5758 2.581 - 0.835 - - - 0.851 0.895 - - von Willebrand factor D and EGF domains [Source:ZFIN;Acc:ZDB-GENE-060929-1226]
19. rapsn ENSDARG00000041133, ENSDARG00000111358 1416 2.564 - 0.854 - - - 0.780 0.930 - - receptor-associated protein of the synapse, 43kD [Source:ZFIN;Acc:ZDB-GENE-030313-1]
20. pbxip1a ENSDARG00000071015 4960 2.561 0.773 0.835 - - - - 0.953 - - pre-B-cell leukemia homeobox interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-060503-871]
21. DNAJA4 ENSDARG00000051762 5657 2.549 - 0.889 - - - 0.757 0.903 - - DnaJ heat shock protein family (Hsp40) member A4 [Source:HGNC Symbol;Acc:HGNC:14885]
22. myoz2b ENSDARG00000037266 2139 2.545 - 0.758 - - - 0.848 0.939 - - myozenin 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1853]
23. asb2a asb2a 845 2.541 - 0.863 - - - 0.789 0.889 - -
24. limch1a ENSDARG00000074275 2981 2.532 - 0.847 - - - 0.775 0.910 - - LIM and calponin homology domains 1a [Source:ZFIN;Acc:ZDB-GENE-090312-153]
25. CU633479.5 ENSDARG00000114818 1815 2.524 - 0.823 - - - 0.753 0.948 - -
26. ntmt1 ENSDARG00000022399 5779 2.523 - 0.884 - - - 0.751 0.888 - - N-terminal Xaa-Pro-Lys N-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2055]
27. tnnc1b ENSDARG00000037539 13945 2.521 - 0.842 - - - 0.776 0.903 - - troponin C type 1b (slow) [Source:ZFIN;Acc:ZDB-GENE-040625-62]
28. rp42-pen rp42-pen 3395 2.518 - 0.889 - - - 0.748 0.881 - -
29. TRIM63 TRIM63 1600 2.512 - 0.752 - - - 0.867 0.893 - -
30. camk2d2 ENSDARG00000014273 2840 2.51 - 0.719 0.979 - - - 0.812 - - calcium/calmodulin-dependent protein kinase (CaM kinase) II delta 2 [Source:ZFIN;Acc:ZDB-GENE-040718-277]
31. klhl40a ENSDARG00000039052 2537 2.503 - 0.863 - - - 0.772 0.868 - - kelch-like family member 40a [Source:ZFIN;Acc:ZDB-GENE-050916-1]
32. eif2s1b ENSDARG00000052178 11961 2.491 - - 0.923 - - 0.773 0.795 - - eukaryotic translation initiation factor 2, subunit 1 alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-283]
33. MUSTN1 MUSTN1 1882 2.489 - 0.793 - - - 0.829 0.867 - -
34. srpk3 ENSDARG00000005916 1546 2.488 0.764 0.840 - - - - 0.884 - - SRSF protein kinase 3 [Source:ZFIN;Acc:ZDB-GENE-101025-2]
35. myf6 ENSDARG00000029830 1911 2.48 0.728 0.871 - - - - 0.881 - - myogenic factor 6 [Source:ZFIN;Acc:ZDB-GENE-040309-2]
36. trdn ENSDARG00000041779 4283 2.468 - 0.807 - - - 0.754 0.907 - - triadin [Source:ZFIN;Acc:ZDB-GENE-041014-193]
37. ywhag2 ENSDARG00000071658, ENSDARG00000116741 3326 2.46 0.798 0.843 - - - - 0.819 - - 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-061023-2]
38. PTPLA PTPLA 4044 2.446 - 0.844 - - - 0.718 0.884 - -
39. cct8 ENSDARG00000008243 6843 2.442 - 0.777 - - - 0.807 0.858 - - chaperonin containing TCP1, subunit 8 (theta) [Source:ZFIN;Acc:ZDB-GENE-040426-876]
40. pygma ENSDARG00000055518 15972 2.439 0.725 0.821 - - - - 0.893 - - phosphorylase, glycogen, muscle A [Source:ZFIN;Acc:ZDB-GENE-050522-482]
41. palm1a ENSDARG00000026882, ENSDARG00000115356 3425 2.424 0.723 0.862 - - - - 0.839 - - paralemmin 1a [Source:ZFIN;Acc:ZDB-GENE-050417-409]
42. sdhdb ENSDARG00000030139 9761 2.424 - - 0.962 - - 0.744 0.718 - - succinate dehydrogenase complex, subunit D, integral membrane protein b [Source:ZFIN;Acc:ZDB-GENE-040822-17]
43. myhc4 ENSDARG00000035438 1322 2.411 - 0.732 - - - 0.757 0.922 - - myosin heavy chain 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6206]
44. zgc:92518 ENSDARG00000016343 3837 2.405 0.705 - - - - 0.778 0.922 - - zgc:92518 [Source:ZFIN;Acc:ZDB-GENE-040718-53]
45. fxr2 ENSDARG00000016260, ENSDARG00000116730 10030 2.403 0.741 - - - - 0.752 0.910 - - fragile X mental retardation, autosomal homolog 2 [Source:ZFIN;Acc:ZDB-GENE-040426-943]
46. tmsb ENSDARG00000054911 6411 2.401 0.855 0.803 - - - - 0.743 - - thymosin, beta [Source:ZFIN;Acc:ZDB-GENE-050307-5]
47. jph1a ENSDARG00000058603 2852 2.4 - 0.776 - - - 0.710 0.914 - - junctophilin 1a [Source:ZFIN;Acc:ZDB-GENE-040724-233]
48. si:ch211-242b18.1 ENSDARG00000054723 2929 2.397 - 0.789 - - - 0.788 0.820 - - si:ch211-242b18.1 [Source:ZFIN;Acc:ZDB-GENE-030131-1518]
49. myod1 ENSDARG00000030110 6019 2.392 - 0.757 - - - 0.721 0.914 - - myogenic differentiation 1 [Source:ZFIN;Acc:ZDB-GENE-980526-561]
50. desi2 ENSDARG00000004460 1593 2.389 - 0.872 - - - 0.762 0.755 - - desumoylating isopeptidase 2 [Source:ZFIN;Acc:ZDB-GENE-040801-39]
51. enah ENSDARG00000032049 1526 2.389 - 0.792 - - - 0.737 0.860 - - enabled homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-010323-11]
52. mlf1 ENSDARG00000077301 789 2.388 - 0.820 - - - 0.732 0.836 - - myeloid leukemia factor 1 [Source:ZFIN;Acc:ZDB-GENE-080917-7]
53. BX530018.3 ENSDARG00000107022 614 2.383 - 0.796 - - - 0.758 0.829 - -
54. nid1a ENSDARG00000068710 3948 2.372 0.766 - - - - 0.728 0.878 - - nidogen 1a [Source:ZFIN;Acc:ZDB-GENE-050302-58]
55. NRAP ENSDARG00000009341 3565 2.37 - 0.793 - - - 0.724 0.853 - - nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
56. tnnt2d ENSDARG00000002988 7590 2.368 - 0.725 - - - 0.715 0.928 - - troponin T2d, cardiac [Source:ZFIN;Acc:ZDB-GENE-050626-97]
57. six2b ENSDARG00000054878 567 2.365 - 0.748 - - - 0.824 0.793 - - SIX homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-080723-23]
58. CR847973.1 ENSDARG00000115516 8754 2.363 - 0.749 - - - 0.731 0.883 - -
59. znf648 ENSDARG00000104823 1918 2.361 - 0.770 - - - 0.816 0.775 - - zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
60. fxr1 ENSDARG00000022968 2831 2.36 0.778 - - - - 0.714 0.868 - - fragile X mental retardation, autosomal homolog 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5431]
61. chrne ENSDARG00000034307, ENSDARG00000112263 1022 2.357 0.710 - - - - 0.854 0.793 - - cholinergic receptor, nicotinic, epsilon [Source:ZFIN;Acc:ZDB-GENE-040808-32]
62. dnajc15 ENSDARG00000038309 1274 2.353 0.801 0.825 - - - - 0.727 - - DnaJ (Hsp40) homolog, subfamily C, member 15 [Source:ZFIN;Acc:ZDB-GENE-040801-216]
63. tlk1a ENSDARG00000042467 2339 2.347 0.726 0.744 0.877 - - - - - - tousled-like kinase 1a [Source:ZFIN;Acc:ZDB-GENE-071008-2]
64. ddx49 ENSDARG00000012899 1604 2.345 - 0.854 - - - 0.749 0.742 - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Source:ZFIN;Acc:ZDB-GENE-031030-3]
65. mtdhb ENSDARG00000004939 1225 2.343 0.759 0.825 - - - 0.759 - - - metadherin b [Source:ZFIN;Acc:ZDB-GENE-090929-2]
66. kcnma1a ENSDARG00000079840 2584 2.34 - 0.785 - - - 0.736 0.819 - - potassium large conductance calcium-activated channel, subfamily M, alpha member 1a [Source:ZFIN;Acc:ZDB-GENE-070202-9]
67. cilp ENSDARG00000053362 1429 2.336 - 0.836 - - - 0.703 0.797 - - cartilage intermediate layer protein, nucleotide pyrophosphohydrolase [Source:ZFIN;Acc:ZDB-GENE-050208-76]
68. CU467854.2 CU467854.2 298 2.336 - 0.743 - - - 0.737 0.856 - -
69. eif2s3 ENSDARG00000008292 17051 2.332 0.726 0.758 0.848 - - - - - - eukaryotic translation initiation factor 2, subunit 3 gamma [Source:ZFIN;Acc:ZDB-GENE-030131-5552]
70. CR388002.1 CR388002.1 1998 2.318 0.732 0.832 - - - - 0.754 - -
71. ypel2b ENSDARG00000087258, ENSDARG00000116766 539 2.31 - 0.761 - - - 0.737 0.812 - - yippee-like 2b [Source:ZFIN;Acc:ZDB-GENE-110419-2]
72. acsl1 acsl1 4216 2.286 0.732 - - - - 0.734 0.820 - -
73. slc43a1b ENSDARG00000037748 1406 2.283 - 0.764 - - - 0.712 0.807 - - solute carrier family 43 (amino acid system L transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-070209-173]
74. ache ENSDARG00000031796 1985 2.277 - 0.818 - - - 0.710 0.749 - - acetylcholinesterase [Source:ZFIN;Acc:ZDB-GENE-010906-1]
75. fgf13a ENSDARG00000035056 752 2.276 0.710 - - - - 0.795 0.771 - - fibroblast growth factor 13a [Source:ZFIN;Acc:ZDB-GENE-041114-101]
76. EEF1E1 ENSDARG00000071774 3806 2.271 0.777 0.763 - - - - 0.731 - - eukaryotic translation elongation factor 1 epsilon 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4949]
77. fat1 fat1 3934 2.268 0.757 0.791 - - - - 0.720 - -
78. ndufv1 ENSDARG00000036438 8437 2.239 0.714 - - - - 0.780 0.745 - - NADH:ubiquinone oxidoreductase core subunit V1 [Source:ZFIN;Acc:ZDB-GENE-040808-73]
79. col4a2 ENSDARG00000104110 947 2.238 - 0.727 - - - 0.719 0.792 - - collagen, type IV, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-070725-3]
80. mir133b_1 671 2.21 - 0.712 - - - 0.786 0.712 - - microRNA 133b
81. CR450814.3 CR450814.3 608 2.206 - 0.710 - - - 0.718 0.778 - -
82. mrps18b ENSDARG00000007065 2121 1.887 - 0.895 0.992 - - - - - - mitochondrial ribosomal protein S18B [Source:ZFIN;Acc:ZDB-GENE-050417-278]
83. C13H10orf71 3489 1.833 - 0.896 - - - - 0.937 - - chromosome 13 C10orf71 homolog
84. hspa4a ENSDARG00000004754 3439 1.829 - - 0.974 - - - 0.855 - - heat shock protein 4a [Source:ZFIN;Acc:ZDB-GENE-040426-2832]
85. ryr1b ENSDARG00000023797 5693 1.822 - 0.897 - - - - 0.925 - - ryanodine receptor 1b (skeletal) [Source:ZFIN;Acc:ZDB-GENE-070705-417]
86. pdlim3b ENSDARG00000014248, ENSDARG00000111275 708 1.806 - 0.855 - - - - 0.951 - - PDZ and LIM domain 3b [Source:ZFIN;Acc:ZDB-GENE-060130-104]
87. ppp1r14bb ENSDARG00000030161 2349 1.805 - - 0.989 - - - 0.816 - - protein phosphatase 1, regulatory (inhibitor) subunit 14Bb [Source:ZFIN;Acc:ZDB-GENE-030616-595]
88. mybphb ENSDARG00000003081 5208 1.797 - 0.905 - - - - 0.892 - - myosin binding protein Hb [Source:ZFIN;Acc:ZDB-GENE-030131-9794]
89. lnpa ENSDARG00000063646, ENSDARG00000115902 2373 1.795 - 0.920 - - - - 0.875 - - limb and neural patterns a [Source:ZFIN;Acc:ZDB-GENE-030131-4960]
90. lrrc20 ENSDARG00000105018 1970 1.784 - 0.910 - - - - 0.874 - - leucine rich repeat containing 20 [Source:ZFIN;Acc:ZDB-GENE-041114-49]
91. grpel2 ENSDARG00000069421 5673 1.784 - 0.802 0.982 - - - - - - GrpE-like 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-091204-188]
92. srl ENSDARG00000104587 11126 1.781 - 0.867 - - - - 0.914 - - sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]
93. usp28 ENSDARG00000008880 1850 1.776 - 0.841 - - - - 0.935 - - ubiquitin specific peptidase 28 [Source:ZFIN;Acc:ZDB-GENE-041008-142]
94. tnw 16679 1.773 - 0.839 - - - - 0.934 - - tenascin W, transcript variant X2
95. cdkal1 ENSDARG00000104848 2102 1.771 - 0.869 0.902 - - - - - - CDK5 regulatory subunit associated protein 1-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1443]
96. nmrk2 ENSDARG00000067848 10293 1.77 - 0.837 - - - - 0.933 - - nicotinamide riboside kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040912-44]
97. alpk3a ENSDARG00000078989 1992 1.769 - 0.858 - - - - 0.911 - - alpha-kinase 3a [Source:ZFIN;Acc:ZDB-GENE-050419-48]
98. klhl21 ENSDARG00000039255 2550 1.767 - 0.900 - - - - 0.867 - - kelch-like family member 21 [Source:ZFIN;Acc:ZDB-GENE-040426-2627]
99. BX294434.1 ENSDARG00000061272 6493 1.766 - 0.845 - - - - 0.921 - - solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
100. sptb ENSDARG00000030490 7128 1.765 - 0.836 - - - - 0.929 - - spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]

There are 1583 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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