Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for sirt3

Gene Name Gene ID Reads Annotation
sirt3 ENSDARG00000035819 101 sirtuin 3 [Source:ZFIN;Acc:ZDB-GENE-070112-1762]










Genes with expression patterns similar to sirt3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sirt3 ENSDARG00000035819 101 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 sirtuin 3 [Source:ZFIN;Acc:ZDB-GENE-070112-1762]
2. si:dkeyp-82b4.2 ENSDARG00000112648 14 2.158 - 0.706 - - - 0.722 0.730 - - si:dkeyp-82b4.2 [Source:ZFIN;Acc:ZDB-GENE-060503-561]
3. zbtb14 ENSDARG00000098273 36 1.909 0.912 - - - - - 0.997 - - zinc finger and BTB domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-040426-2946]
4. si:ch211-153l6.4 si:ch211-153l6.4 45 1.892 0.967 - - - - - 0.925 - -
5. ARHGAP44 ENSDARG00000104549 91 1.811 0.957 0.854 - - - - - - - Rho GTPase activating protein 44 [Source:ZFIN;Acc:ZDB-GENE-120206-2]
6. kcnk5a ENSDARG00000023587, ENSDARG00000111204 128 1.777 - - - - - 0.816 0.961 - - potassium channel, subfamily K, member 5a [Source:ZFIN;Acc:ZDB-GENE-051113-112]
7. si:ch211-113a14.14_2 si:ch211-113a14.14_2 156 1.756 0.772 - - - - - 0.984 - -
8. CABZ01112521.1 CABZ01112521.1 83 1.755 0.760 - - - - - 0.995 - -
9. drd4a ENSDARG00000038363 82 1.741 - - - - - 0.760 0.981 - - dopamine receptor D4a [Source:ZFIN;Acc:ZDB-GENE-070112-996]
10. wdr47a ENSDARG00000078136 522 1.731 0.897 - - - - - 0.834 - - WD repeat domain 47a [Source:ZFIN;Acc:ZDB-GENE-070216-3]
11. pde10a ENSDARG00000003449 60 1.705 0.814 - - - - - 0.891 - - phosphodiesterase 10A [Source:ZFIN;Acc:ZDB-GENE-040426-1115]
12. ZBTB8A ENSDARG00000059226 98 1.693 - - - - - 0.786 0.907 - - zinc finger and BTB domain containing 8A [Source:ZFIN;Acc:ZDB-GENE-060421-5153]
13. rhbdd1 ENSDARG00000021046 120 1.691 0.947 - - - - 0.744 - - - rhomboid domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050417-85]
14. soul5 ENSDARG00000075015 118 1.683 - - - - 0.901 - 0.782 - - heme-binding protein soul5 [Source:ZFIN;Acc:ZDB-GENE-110718-2]
15. skap1 ENSDARG00000001498, ENSDARG00000114047 55 1.64 0.781 - - - 0.859 - - - - src kinase associated phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-090721-1]
16. CTIF ENSDARG00000090617 270 1.637 0.801 - - - - 0.836 - - - CBP80/20-dependent translation initiation factor [Source:ZFIN;Acc:ZDB-GENE-130530-1003]
17. spg21 ENSDARG00000007760 409 1.632 - - - - - 0.814 0.818 - - spastic paraplegia 21 (autosomal recessive, Mast syndrome) [Source:ZFIN;Acc:ZDB-GENE-040426-2722]
18. cdc45 ENSDARG00000043720 353 1.621 - - - - - 0.825 0.796 - - CDC45 cell division cycle 45 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-2710]
19. tprn ENSDARG00000101102 97 1.619 0.913 0.706 - - - - - - - taperin [Source:ZFIN;Acc:ZDB-GENE-081104-254]
20. TMEM55B TMEM55B 76 1.619 - 0.788 - - - - 0.831 - -
21. lss ENSDARG00000061274 68 1.615 0.880 - - - - 0.735 - - - lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase) [Source:ZFIN;Acc:ZDB-GENE-050119-7]
22. arhgap25 ENSDARG00000061784 112 1.613 - 0.746 - - - - 0.867 - - Rho GTPase activating protein 25 [Source:ZFIN;Acc:ZDB-GENE-060526-210]
23. TONSL ENSDARG00000071294, ENSDARG00000116200 285 1.611 0.820 - - - - - 0.791 - - tonsoku-like, DNA repair protein [Source:ZFIN;Acc:ZDB-GENE-041111-230]
24. has2 ENSDARG00000036987 349 1.593 - - - - - 0.761 0.832 - - hyaluronan synthase 2 [Source:ZFIN;Acc:ZDB-GENE-020828-1]
25. ino80e ENSDARG00000022939, ENSDARG00000101892 216 1.592 0.754 0.838 - - - - - - - INO80 complex subunit E [Source:ZFIN;Acc:ZDB-GENE-040426-1818]
26. dok1b ENSDARG00000099177 163 1.586 - 0.781 - - - 0.805 - - - docking protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2063]
27. BX005423.3 BX005423.3 33 1.585 - 0.766 - - - 0.819 - - -
28. cib1 ENSDARG00000103118 291 1.568 - - - - 0.784 - 0.784 - - calcium and integrin binding 1 (calmyrin) [Source:ZFIN;Acc:ZDB-GENE-050417-170]
29. usp11 ENSDARG00000076303 183 1.535 - 0.798 - - - 0.737 - - - ubiquitin specific peptidase 11 [Source:ZFIN;Acc:ZDB-GENE-081104-421]
30. mettl16 ENSDARG00000055838 818 1.529 0.795 - - - - - 0.734 - - methyltransferase like 16 [Source:ZFIN;Acc:ZDB-GENE-040801-130]
31. BCR ENSDARG00000079286 389 1.528 0.765 0.763 - - - - - - - breakpoint cluster region [Source:ZFIN;Acc:ZDB-GENE-040724-43]
32. KLHL2 ENSDARG00000061786 204 1.511 0.756 - - - 0.755 - - - - kelch-like family member 2 [Source:ZFIN;Acc:ZDB-GENE-090312-193]
33. magi2 magi2 301 1.506 0.730 - - - - - 0.776 - -
34. lactb ENSDARG00000040803 435 1.491 - 0.714 - - - - 0.777 - - lactamase, beta [Source:ZFIN;Acc:ZDB-GENE-020111-1]
35. cmtm6 ENSDARG00000099631 641 1.467 - 0.727 - - - - 0.740 - - CKLF-like MARVEL transmembrane domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-030729-15]
36. KIF20B KIF20B 800 1.455 - 0.717 - - - - 0.738 - -
37. si:ch211-190k17.19 ENSDARG00000095756 19 1.445 - 0.706 - - - 0.739 - - - si:ch211-190k17.19 [Source:ZFIN;Acc:ZDB-GENE-070912-167]
38. fam213b ENSDARG00000029795 387 1.418 - - - - 0.709 0.709 - - - family with sequence similarity 213, member B [Source:ZFIN;Acc:ZDB-GENE-040426-2556]
39. nlgn4a 102 0.994 - - - - - - 0.994 - - neuroligin 4a, transcript variant X1
40. PRRT4 ENSDARG00000088343 36 0.99 - - - - - - 0.990 - - proline-rich transmembrane protein 4 [Source:ZFIN;Acc:ZDB-GENE-140106-210]
41. fgf16 ENSDARG00000042233, ENSDARG00000110602 39 0.986 - - - - - - 0.986 - - fibroblast growth factor 16 [Source:ZFIN;Acc:ZDB-GENE-060427-3]
42. HIST1H4J HIST1H4J 31 0.986 - - - - - - 0.986 - -
43. dapp1 ENSDARG00000039535 23 0.986 - - - - - - 0.986 - - dual adaptor of phosphotyrosine and 3-phosphoinositides [Source:ZFIN;Acc:ZDB-GENE-050417-180]
44. C24H7orf10 C24H7orf10 7 0.986 - - - - - - 0.986 - -
45. ins ENSDARG00000035350, ENSDARG00000116735 317 0.986 - - - - - - 0.986 - - preproinsulin [Source:ZFIN;Acc:ZDB-GENE-980526-110]
46. rad51c ENSDARG00000068919 98 0.986 - - - - - - 0.986 - - RAD51 paralog C [Source:ZFIN;Acc:ZDB-GENE-041010-204]
47. cadpsa ENSDARG00000043661 160 0.986 - - - - - - 0.986 - - Ca2+-dependent activator protein for secretion a [Source:ZFIN;Acc:ZDB-GENE-030616-525]
48. BX324215.3 BX324215.3 12 0.986 - - - - - - 0.986 - -
49. si:dkeyp-100a1.6 ENSDARG00000092141 33 0.986 - - - - - - 0.986 - - si:dkeyp-100a1.6 [Source:ZFIN;Acc:ZDB-GENE-081104-448]
50. FP085412.2 FP085412.2 5 0.986 - - - - - - 0.986 - -
51. pla1a ENSDARG00000102176, ENSDARG00000109274 29 0.986 - - - - - - 0.986 - - phospholipase A1 member A [Source:ZFIN;Acc:ZDB-GENE-030131-5949]
52. CABZ01054405.1 CABZ01054405.1 115 0.986 - - - - - - 0.986 - -
53. dlx6a ENSDARG00000042291 185 0.986 - - - - - - 0.986 - - distal-less homeobox 6a [Source:ZFIN;Acc:ZDB-GENE-980526-448]
54. slc18a2 ENSDARG00000015110, ENSDARG00000115207 6 0.986 - - - - - - 0.986 - - solute carrier family 18 (vesicular monoamine transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-080514-1]
55. wu:fi34b01 38 0.986 - - - - - - 0.986 - - wu:fi34b01
56. HEATR2 HEATR2 6 0.986 - - - - - - 0.986 - -
57. lppr5b lppr5b 23 0.986 - - - - - - 0.986 - -
58. PRKCA_1 ENSDARG00000099841 12 0.986 - - - - - - 0.986 - - protein kinase C alpha [Source:HGNC Symbol;Acc:HGNC:9393]
59. arhgef12b ENSDARG00000100913 1358 0.984 - - - - - - 0.984 - - Rho guanine nucleotide exchange factor (GEF) 12b [Source:ZFIN;Acc:ZDB-GENE-070705-36]
60. dusp3a ENSDARG00000061255, ENSDARG00000113934 328 0.981 - - - - - - 0.981 - - dual specificity phosphatase 3a [Source:ZFIN;Acc:ZDB-GENE-111207-3]
61. otx5 ENSDARG00000043483 282 0.98 - - - - - - 0.980 - - orthodenticle homolog 5 [Source:ZFIN;Acc:ZDB-GENE-030508-1]
62. olfml2bb ENSDARG00000021480 256 0.98 - - - - - - 0.980 - - olfactomedin-like 2Bb [Source:ZFIN;Acc:ZDB-GENE-070912-266]
63. slc5a11 ENSDARG00000019932 160 0.98 - - - - - - 0.980 - - solute carrier family 5 (sodium/inositol cotransporter), member 11 [Source:ZFIN;Acc:ZDB-GENE-041114-9]
64. mrap ENSDARG00000091992 9 0.976 - - - - - - 0.976 - - melanocortin 2 receptor accessory protein [Source:ZFIN;Acc:ZDB-GENE-060503-387]
65. ephx1 ENSDARG00000042854 161 0.976 - - - - - - 0.976 - - epoxide hydrolase 1, microsomal (xenobiotic) [Source:ZFIN;Acc:ZDB-GENE-040426-913]
66. dgat1b ENSDARG00000054914 119 0.976 - - - - - - 0.976 - - diacylglycerol O-acyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-040718-158]
67. AL929092.1 ENSDARG00000092217 50 0.975 - - - - - - 0.975 - -
68. zdhhc24_1 ENSDARG00000105134, ENSDARG00000110259, ENSDARG00000116301 40 0.975 - - - - - - 0.975 - - zinc finger, DHHC-type containing 24 [Source:ZFIN;Acc:ZDB-GENE-040718-8]
69. ulk1a ENSDARG00000062518 10 0.975 - - - - - - 0.975 - - unc-51 like autophagy activating kinase 1a [Source:ZFIN;Acc:ZDB-GENE-080723-31]
70. cbln2a ENSDARG00000074601 12 0.974 - - - - - - 0.974 - - cerebellin 2a precursor [Source:ZFIN;Acc:ZDB-GENE-070912-591]
71. PPP1R35 ENSDARG00000068916 94 0.974 - - - - - - 0.974 - - protein phosphatase 1, regulatory subunit 35 [Source:ZFIN;Acc:ZDB-GENE-060825-232]
72. zgc:173570 ENSDARG00000037645, ENSDARG00000114242 46 0.973 - - - - - - 0.973 - - zgc:173570 [Source:ZFIN;Acc:ZDB-GENE-080218-15]
73. si:zfos-364h11.1 99 0.971 - - - - - - 0.971 - - si:zfos-364h11.1, transcript variant X4
74. kcnk10b ENSDARG00000045956 43 0.97 - - - - - - 0.970 - - potassium channel, subfamily K, member 10b [Source:ZFIN;Acc:ZDB-GENE-050420-31]
75. cyp27a1.4 ENSDARG00000055159 47 0.97 - - - - - - 0.970 - - cytochrome P450, family 27, subfamily A, polypeptide 1, gene 4 [Source:ZFIN;Acc:ZDB-GENE-030131-1060]
76. MAGI3 MAGI3 114 0.969 - - - - - - 0.969 - -
77. FHOD3 FHOD3 422 0.968 - - - - - - 0.968 - -
78. CU570684.5 CU570684.5 55 0.967 - - - - - - 0.967 - -
79. zyx ENSDARG00000075733 429 0.966 - - - - - - 0.966 - - zyxin [Source:ZFIN;Acc:ZDB-GENE-070928-18]
80. fer ENSDARG00000012196 83 0.965 - - - - - - 0.965 - - fer (fps/fes related) tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-060526-234]
81. lrrc24 ENSDARG00000101704 224 0.965 - - - - - - 0.965 - - leucine rich repeat containing 24 [Source:ZFIN;Acc:ZDB-GENE-060503-496]
82. mir184 48 0.964 - - - - - - 0.964 - - microRNA 184
83. BX936303.1 ENSDARG00000103105 26 0.963 - - - - - - 0.963 - -
84. si:ch211-218c6.9 si:ch211-218c6.9 40 0.963 - - - - - - 0.963 - -
85. gas8 ENSDARG00000101431 140 0.96 - - - - - - 0.960 - - growth arrest-specific 8 [Source:ZFIN;Acc:ZDB-GENE-030131-1980]
86. cbln13 ENSDARG00000026904, ENSDARG00000114505 93 0.96 - - - - - - 0.960 - - cerebellin 13 [Source:ZFIN;Acc:ZDB-GENE-070912-288]
87. raver2 ENSDARG00000075034 290 0.96 - - - - - - 0.960 - - ribonucleoprotein, PTB-binding 2 [Source:ZFIN;Acc:ZDB-GENE-090713-1]
88. CCDC34 CCDC34 313 0.959 - - - - - - 0.959 - -
89. smtla ENSDARG00000038191 42 0.959 - - - - - - 0.959 - - somatolactin alpha [Source:ZFIN;Acc:ZDB-GENE-060123-2]
90. NMNAT3 ENSDARG00000077034 126 0.957 - - - - - - 0.957 - - nicotinamide nucleotide adenylyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:20989]
91. eno1b ENSDARG00000013750 63 0.957 - - - - - - 0.957 - - enolase 1b, (alpha) [Source:ZFIN;Acc:ZDB-GENE-040426-1651]
92. AP5B1 ENSDARG00000078805 62 0.957 - - - - - - 0.957 - - adaptor related protein complex 5 subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-131121-204]
93. CR854829.2 CR854829.2 11 0.957 0.957 - - - - - - - -
94. CABZ01079241.1 ENSDARG00000098424 88 0.956 - - - - - - 0.956 - - zinc finger Y-chromosomal protein 1-like [Source:NCBI gene;Acc:563292]
95. rasl12 ENSDARG00000002701 66 0.955 - - - - - - 0.955 - - RAS-like, family 12 [Source:ZFIN;Acc:ZDB-GENE-040426-1201]
96. HERC4 ENSDARG00000059936 369 0.954 - - - - - - 0.954 - - HECT and RLD domain containing E3 ubiquitin protein ligase 4 [Source:ZFIN;Acc:ZDB-GENE-070801-1]
97. GPR158 GPR158 64 0.953 - - - - - - 0.953 - -
98. fosb ENSDARG00000055751 170 0.952 - - - - - - 0.952 - - FBJ murine osteosarcoma viral oncogene homolog B [Source:ZFIN;Acc:ZDB-GENE-041114-181]
99. ECEL1 ENSDARG00000060549 62 0.951 - - - - - - 0.951 - - endothelin converting enzyme-like 1 [Source:ZFIN;Acc:ZDB-GENE-130530-692]
100. nmnat1 ENSDARG00000105748 102 0.951 - - - - - - 0.951 - - nicotinamide nucleotide adenylyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-050417-101]

There are 1116 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA