Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for sin3b

Gene Name Gene ID Reads Annotation
sin3b ENSDARG00000062472 2025 SIN3 transcription regulator family member B [Source:ZFIN;Acc:ZDB-GENE-030131-8264]










Genes with expression patterns similar to sin3b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sin3b ENSDARG00000062472 2025 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SIN3 transcription regulator family member B [Source:ZFIN;Acc:ZDB-GENE-030131-8264]
2. marcksa ENSDARG00000004049 2518 2.555 - - - - 0.943 - - 0.776 0.836 myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
3. rbm15b ENSDARG00000078966, ENSDARG00000112832 1888 2.541 - - - 0.777 0.958 - - - 0.806 RNA binding motif protein 15B [Source:ZFIN;Acc:ZDB-GENE-080204-91]
4. hmgb1a ENSDARG00000099175, ENSDARG00000114353 17231 2.489 - - - - 0.890 - - 0.761 0.838 high mobility group box 1a [Source:ZFIN;Acc:ZDB-GENE-030131-341]
5. gabpa ENSDARG00000069289, ENSDARG00000110923 1536 2.472 - - 0.701 - 0.989 - - - 0.782 GA binding protein transcription factor subunit alpha [Source:ZFIN;Acc:ZDB-GENE-011010-2]
6. calm3a ENSDARG00000015050, ENSDARG00000100825 1817 2.468 - - - - 0.977 0.717 0.774 - - calmodulin 3a (phosphorylase kinase, delta) [Source:ZFIN;Acc:ZDB-GENE-030131-5590]
7. SENP1 SENP1 1122 2.461 - - - - 0.987 0.773 - - 0.701
8. kif22 ENSDARG00000102624 3694 2.453 - - - - 0.973 - 0.742 - 0.738 kinesin family member 22 [Source:ZFIN;Acc:ZDB-GENE-080204-34]
9. smarca5 ENSDARG00000052348 15433 2.453 - - - - - 0.788 0.850 - 0.815 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:ZFIN;Acc:ZDB-GENE-021125-1]
10. txlna ENSDARG00000077037 2614 2.449 - - - - 0.976 0.760 0.713 - - taxilin alpha [Source:ZFIN;Acc:ZDB-GENE-030131-2900]
11. whsc1l1 8544 2.442 - - - - - 0.773 0.894 - 0.775 Wolf-Hirschhorn syndrome candidate 1-like 1, transcript variant X2
12. rbb4 rbb4 15541 2.436 - - 0.768 - - - 0.882 - 0.786
13. snrpd3l ENSDARG00000076283 7655 2.415 - - - - 0.763 - 0.822 - 0.830 small nuclear ribonucleoprotein D3 polypeptide, like [Source:ZFIN;Acc:ZDB-GENE-030131-5219]
14. znf865 ENSDARG00000036698 15532 2.407 - - - - 0.922 0.743 0.742 - - zinc finger protein 865 [Source:ZFIN;Acc:ZDB-GENE-060503-896]
15. sulf2 sulf2 1286 2.406 - 0.708 - - 0.985 - 0.713 - -
16. hmg20a ENSDARG00000031198 1763 2.405 - - - - 0.898 0.754 - - 0.753 high mobility group 20A [Source:ZFIN;Acc:ZDB-GENE-030131-5107]
17. lrrn1 ENSDARG00000060115, ENSDARG00000115960 5175 2.392 - - - - 0.805 - - 0.771 0.816 leucine rich repeat neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-071126-1]
18. wu:fc51f04 wu:fc51f04 7074 2.391 - 0.740 - - 0.883 - - - 0.768
19. hmgb2b ENSDARG00000053990 11519 2.389 - - - - 0.719 - 0.815 - 0.855 high mobility group box 2b [Source:ZFIN;Acc:ZDB-GENE-040912-122]
20. ssbp4 ENSDARG00000056483 10196 2.332 - - - - - 0.769 0.770 0.793 - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
21. cdk2ap2 ENSDARG00000103145 8024 2.33 - - - - 0.821 - 0.714 - 0.795 cyclin-dependent kinase 2 associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-040718-35]
22. foxk2 ENSDARG00000030583 2982 2.327 - - - - - - 0.771 0.841 0.715 forkhead box K2 [Source:ZFIN;Acc:ZDB-GENE-030131-2861]
23. tgif1 ENSDARG00000059337 4020 2.318 0.755 - - - - - 0.828 - 0.735 TGFB-induced factor homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030131-475]
24. sf1 ENSDARG00000008188 5142 2.294 0.788 - - - - - 0.765 - 0.741 splicing factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2492]
25. rrm1 ENSDARG00000014017 7296 2.294 - 0.800 - - - - 0.744 - 0.750 ribonucleotide reductase M1 polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-247]
26. mapre1b ENSDARG00000002659 9119 2.293 - - - - - 0.751 - 0.722 0.820 microtubule-associated protein, RP/EB family, member 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2256]
27. parp1 ENSDARG00000019529 6787 2.287 - - 0.757 - - - - 0.735 0.795 poly (ADP-ribose) polymerase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3955]
28. rbm8a ENSDARG00000016516 8789 2.281 - - - - 0.783 0.774 0.724 - - RNA binding motif protein 8A [Source:ZFIN;Acc:ZDB-GENE-050306-51]
29. smarcb1b ENSDARG00000011594 2413 2.273 - - 0.765 - - 0.705 - 0.803 - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1b [Source:ZFIN;Acc:ZDB-GENE-991008-16]
30. ccnt1 ENSDARG00000017525 1888 2.265 - - - 0.733 - 0.786 - - 0.746 cyclin T1 [Source:ZFIN;Acc:ZDB-GENE-030131-6397]
31. tmpob ENSDARG00000022978 8121 2.244 - - 0.752 - - - 0.740 - 0.752 thymopoietin b [Source:ZFIN;Acc:ZDB-GENE-050522-8]
32. tmem35 ENSDARG00000052567 5685 2.243 - - - - 0.736 0.711 - - 0.796 transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
33. rbm25 rbm25 3629 2.226 - - - - - 0.726 - 0.725 0.775
34. polr2d ENSDARG00000076509 3386 2.202 - - - - - - 0.725 0.773 0.704 polymerase (RNA) II (DNA directed) polypeptide D [Source:ZFIN;Acc:ZDB-GENE-040714-2]
35. RSF1 RSF1 1242 2.198 - 0.757 - - - 0.716 - - 0.725
36. nhlh2 ENSDARG00000025495 1860 2.185 - 0.742 - - - 0.710 - - 0.733 nescient helix loop helix 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1809]
37. brd3a ENSDARG00000006527 1636 2.184 - - - - - 0.720 0.720 0.744 - bromodomain containing 3a [Source:ZFIN;Acc:ZDB-GENE-030131-6141]
38. whsc1 1701 2.179 - - - - - 0.704 0.729 - 0.746 Wolf-Hirschhorn syndrome candidate 1
39. EIF4G1 EIF4G1 19676 2.14 - - - - - 0.702 - 0.724 0.714
40. CABZ01028287.1 CABZ01028287.1 626 2.137 - 0.706 - - - 0.705 - - 0.726
41. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 1.8 - - - - 0.976 - - - 0.824 cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
42. FAM168B ENSDARG00000101733, ENSDARG00000113953, ENSDARG00000115746 2175 1.779 - - - - 0.976 - - - 0.803 family with sequence similarity 168, member B [Source:ZFIN;Acc:ZDB-GENE-060929-180]
43. clu ENSDARG00000010434 498 1.774 - 0.783 - - 0.991 - - - - clusterin [Source:ZFIN;Acc:ZDB-GENE-040426-1774]
44. supt6h ENSDARG00000006524 3221 1.774 - - - - 0.965 - 0.809 - - SPT6 homolog, histone chaperone [Source:ZFIN;Acc:ZDB-GENE-030131-7949]
45. C24H17orf96 C24H17orf96 1538 1.759 - - - - 0.976 - - - 0.783
46. pias4a ENSDARG00000007081 4264 1.744 - - - - 0.983 - 0.761 - - protein inhibitor of activated STAT, 4a [Source:ZFIN;Acc:ZDB-GENE-040426-2734]
47. cenpe ENSDARG00000063385 4428 1.737 - - - - 0.980 - - 0.757 - centromere protein E [Source:ZFIN;Acc:ZDB-GENE-060929-860]
48. tmem50a ENSDARG00000015757 3244 1.737 - - - - 0.970 - 0.767 - - transmembrane protein 50A [Source:ZFIN;Acc:ZDB-GENE-040426-2937]
49. ube2g1a ENSDARG00000015292, ENSDARG00000112281 3207 1.734 - - - - 0.965 - - - 0.769 ubiquitin-conjugating enzyme E2G 1a (UBC7 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-6065]
50. srgap1 srgap1 2320 1.731 - - - - 0.983 - 0.748 - -
51. zgc:123105 ENSDARG00000003127 3061 1.731 - - - - 0.975 0.756 - - - zgc:123105 [Source:ZFIN;Acc:ZDB-GENE-051113-272]
52. h1fx ENSDARG00000054058 4075 1.727 - - - - 0.962 - - - 0.765 H1 histone family, member X [Source:ZFIN;Acc:ZDB-GENE-030131-1228]
53. psmb6 ENSDARG00000002240 8015 1.725 - - - - 0.971 - - - 0.754 proteasome subunit beta 6 [Source:ZFIN;Acc:ZDB-GENE-990415-216]
54. dhfr ENSDARG00000004251 1824 1.718 - - - - 0.970 - - - 0.748 dihydrofolate reductase [Source:ZFIN;Acc:ZDB-GENE-010406-5]
55. casc5 1487 1.717 - - - - 0.988 - - - 0.729 cancer susceptibility candidate 5, transcript variant X3
56. brd3b ENSDARG00000100129 6387 1.716 - - - - 0.885 - 0.831 - - bromodomain containing 3b [Source:ZFIN;Acc:ZDB-GENE-030131-5316]
57. odz4 odz4 822 1.715 - - - - 0.991 0.724 - - -
58. FP245444.1 FP245444.1 1922 1.715 - - - - 0.984 - - - 0.731
59. lsm14ab ENSDARG00000100553 3837 1.714 - - - - 0.958 0.756 - - - LSM14A mRNA processing body assembly factor b [Source:ZFIN;Acc:ZDB-GENE-040426-2462]
60. ewsr1a ENSDARG00000020258, ENSDARG00000113252 11221 1.712 - - - - - - 0.832 - 0.880 EWS RNA-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2317]
61. ephb4a ENSDARG00000100725 1749 1.712 - - - - 0.974 - 0.738 - - eph receptor B4a [Source:ZFIN;Acc:ZDB-GENE-990415-62]
62. h2afva ENSDARG00000068820 16427 1.711 - - - - - 0.856 0.855 - - H2A histone family, member Va [Source:ZFIN;Acc:ZDB-GENE-020717-1]
63. htatip htatip 1553 1.71 - - - - 0.980 - - - 0.730
64. C1H7orf55 C1H7orf55 2552 1.701 - - - - 0.969 - 0.732 - -
65. apc ENSDARG00000058868 2605 1.701 - - - - 0.973 0.728 - - - adenomatous polyposis coli [Source:ZFIN;Acc:ZDB-GENE-031112-7]
66. h2afx ENSDARG00000029406 2116 1.699 - - - - 0.936 - 0.763 - - H2A histone family, member X [Source:ZFIN;Acc:ZDB-GENE-040426-987]
67. dpp9 ENSDARG00000052606 2279 1.686 - - - - 0.965 - - - 0.721 dipeptidyl-peptidase 9 [Source:ZFIN;Acc:ZDB-GENE-061013-777]
68. sfpq ENSDARG00000011564, ENSDARG00000115611 15626 1.683 - - - - - - 0.812 - 0.871 splicing factor proline/glutamine-rich [Source:ZFIN;Acc:ZDB-GENE-040426-2452]
69. atp6v0cb ENSDARG00000036577 3472 1.682 - - - - 0.966 - - - 0.716 ATPase H+ transporting V0 subunit cb [Source:ZFIN;Acc:ZDB-GENE-030131-4127]
70. srpk1b ENSDARG00000031560 2079 1.677 - 0.714 - - 0.963 - - - - SRSF protein kinase 1b [Source:ZFIN;Acc:ZDB-GENE-070112-2292]
71. hexim1 ENSDARG00000036482 4317 1.671 - - - - 0.934 - 0.737 - - hexamethylene bis-acetamide inducible 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4637]
72. nrarpb ENSDARG00000018958 6225 1.671 - - - - 0.912 - - - 0.759 NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
73. mlf2 ENSDARG00000034616, ENSDARG00000110660 14039 1.671 - - - - 0.880 - 0.791 - - myeloid leukemia factor 2 [Source:ZFIN;Acc:ZDB-GENE-050913-67]
74. HNRNPAB HNRNPAB 22267 1.665 - - - - - - 0.864 - 0.801
75. msi1 ENSDARG00000010710 2634 1.658 - 0.763 - - 0.895 - - - - musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
76. fen1 ENSDARG00000011404 3358 1.651 - - - - 0.935 - 0.716 - - flap structure-specific endonuclease 1 [Source:ZFIN;Acc:ZDB-GENE-031112-11]
77. dr1 ENSDARG00000105098, ENSDARG00000113528 5263 1.647 - - - - 0.879 - - - 0.768 down-regulator of transcription 1 [Source:ZFIN;Acc:ZDB-GENE-061013-797]
78. pdap1a ENSDARG00000092546, ENSDARG00000116115 7617 1.644 - - - - - - 0.834 - 0.810 pdgfa associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1693]
79. TAF15 ENSDARG00000070019 5102 1.636 - - - - - - - 0.758 0.878 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-061215-102]
80. smc1al ENSDARG00000058203 8838 1.624 - - - - - - 0.819 - 0.805 structural maintenance of chromosomes 1A, like [Source:ZFIN;Acc:ZDB-GENE-040426-57]
81. lrrc40 ENSDARG00000017708 1156 1.624 - - - - 0.917 - - - 0.707 leucine rich repeat containing 40 [Source:ZFIN;Acc:ZDB-GENE-030131-6062]
82. gpbp1l1 ENSDARG00000075569, ENSDARG00000112704 3478 1.617 - - - - 0.907 - - - 0.710 GC-rich promoter binding protein 1-like 1 [Source:ZFIN;Acc:ZDB-GENE-031118-220]
83. med16 ENSDARG00000040779, ENSDARG00000116309 939 1.615 - - - - - 0.755 - - 0.860 mediator complex subunit 16 [Source:ZFIN;Acc:ZDB-GENE-090306-4]
84. h3f3a 66671 1.613 - - - - - - 0.811 0.802 - H3 histone, family 3A, transcript variant X1
85. srsf3a ENSDARG00000025397, ENSDARG00000100815 11622 1.612 - - - - - - 0.810 0.802 - serine/arginine-rich splicing factor 3a [Source:ZFIN;Acc:ZDB-GENE-030616-631]
86. srsf7a ENSDARG00000035325, ENSDARG00000110705 11788 1.611 - - - - - - - 0.793 0.818 serine/arginine-rich splicing factor 7a [Source:ZFIN;Acc:ZDB-GENE-040426-1798]
87. eif2s1a ENSDARG00000005827 5992 1.61 - - - - - - - 0.781 0.829 eukaryotic translation initiation factor 2, subunit 1 alpha a [Source:ZFIN;Acc:ZDB-GENE-030131-526]
88. znf207b ENSDARG00000101277, ENSDARG00000110098, ENSDARG00000115586 4227 1.61 0.783 - - - - 0.827 - - - zinc finger protein 207, b [Source:ZFIN;Acc:ZDB-GENE-030131-7377]
89. gnao1b ENSDARG00000036058, ENSDARG00000112730 1951 1.608 - - - - - 0.728 0.880 - - guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, b [Source:ZFIN;Acc:ZDB-GENE-040426-1693]
90. eftud2 ENSDARG00000012261 3081 1.605 - - - - - - - 0.755 0.850 elongation factor Tu GTP binding domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1569]
91. kdm1a ENSDARG00000060679 6152 1.604 - - - - 0.861 - 0.743 - - lysine (K)-specific demethylase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7828]
92. CR936437.1 CR936437.1 6465 1.601 - - 0.786 - - - - - 0.815
93. nr2f1a ENSDARG00000052695 5037 1.6 - - - - 0.850 - - - 0.750 nuclear receptor subfamily 2, group F, member 1a [Source:ZFIN;Acc:ZDB-GENE-980526-115]
94. dla ENSDARG00000010791 9281 1.598 - 0.794 - - - - - - 0.804 deltaA [Source:ZFIN;Acc:ZDB-GENE-980526-29]
95. ldb1a ENSDARG00000010137 3035 1.598 - - - - - - - 0.755 0.843 LIM domain binding 1a [Source:ZFIN;Acc:ZDB-GENE-990415-138]
96. SNRPG ENSDARG00000099667 18697 1.596 - - - - - - 0.782 - 0.814 small nuclear ribonucleoprotein polypeptide G [Source:ZFIN;Acc:ZDB-GENE-040912-105]
97. pnisr ENSDARG00000069855, ENSDARG00000116449 3465 1.595 - - - - - - 0.786 - 0.809 PNN-interacting serine/arginine-rich protein [Source:ZFIN;Acc:ZDB-GENE-030131-362]
98. tfdp2 ENSDARG00000042835 1985 1.595 - 0.837 - - - - - - 0.758 transcription factor Dp-2 [Source:ZFIN;Acc:ZDB-GENE-030219-104]
99. igsf9b ENSDARG00000010408 786 1.595 - - - - - 0.836 - - 0.759 immunoglobulin superfamily, member 9b [Source:ZFIN;Acc:ZDB-GENE-060810-28]
100. coe2 coe2 1633 1.59 - - - - - - - 0.797 0.793

There are 1359 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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