Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for sim1a

Gene Name Gene ID Reads Annotation
sim1a ENSDARG00000023316 190 SIM bHLH transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-020829-1]










Genes with expression patterns similar to sim1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sim1a ENSDARG00000023316 190 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SIM bHLH transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-020829-1]
2. ncf1 ENSDARG00000033735 83 1.71 - 0.879 - - - - - 0.831 - neutrophil cytosolic factor 1 [Source:ZFIN;Acc:ZDB-GENE-031006-6]
3. pcdh2g12 5 1.682 0.803 0.879 - - - - - - - protocadherin 2 gamma 12
4. zp3b ENSDARG00000039828 15 1.671 - 0.879 - - - - 0.792 - - zona pellucida glycoprotein 3b [Source:ZFIN;Acc:ZDB-GENE-031124-2]
5. jmjd7 ENSDARG00000035546 222 1.646 0.829 - - - - - - 0.817 - jumonji domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-050417-86]
6. epha6 ENSDARG00000022971 52 1.645 0.768 - - - - - - 0.877 - eph receptor A6 [Source:ZFIN;Acc:ZDB-GENE-090311-43]
7. si:ch211-191d2.2 ENSDARG00000090836 316 1.639 - - - - - - 0.829 0.810 - si:ch211-191d2.2 [Source:ZFIN;Acc:ZDB-GENE-110407-3]
8. gnl2 ENSDARG00000098080 565 1.639 - - - - - 0.849 - 0.790 - guanine nucleotide binding protein-like 2 (nucleolar) [Source:ZFIN;Acc:ZDB-GENE-040426-2317]
9. baiap2a ENSDARG00000062799 231 1.607 - - - - - - 0.751 0.856 - BAI1-associated protein 2a [Source:ZFIN;Acc:ZDB-GENE-060421-2756]
10. NAT14 ENSDARG00000115349 21 1.598 0.803 0.795 - - - - - - - N-acetyltransferase 14 (GCN5-related, putative) [Source:ZFIN;Acc:ZDB-GENE-060825-15]
11. eif4e1b ENSDARG00000014565 12 1.597 0.718 0.879 - - - - - - - eukaryotic translation initiation factor 4E family member 1B [Source:ZFIN;Acc:ZDB-GENE-980526-127]
12. TRIM14_1 TRIM14_1 228 1.58 - 0.798 - - - - - 0.782 -
13. spata17 ENSDARG00000054414 64 1.58 - - - - - 0.705 - 0.875 - spermatogenesis associated 17 [Source:ZFIN;Acc:ZDB-GENE-111214-1]
14. rabl3 ENSDARG00000040959 271 1.569 - - - - - 0.744 - 0.825 - RAB, member of RAS oncogene family-like 3 [Source:ZFIN;Acc:ZDB-GENE-040808-11]
15. scn4ab ENSDARG00000034588 109 1.557 - 0.820 - - - - 0.737 - - sodium channel, voltage-gated, type IV, alpha, b [Source:ZFIN;Acc:ZDB-GENE-051201-1]
16. grwd1 ENSDARG00000004806, ENSDARG00000109608 1567 1.555 - 0.757 - - - - - 0.798 - glutamate-rich WD repeat containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9844]
17. zgc:92630 ENSDARG00000004141, ENSDARG00000113420 147 1.553 0.764 - - - - - - 0.789 - zgc:92630 [Source:ZFIN;Acc:ZDB-GENE-040718-449]
18. d2hgdh ENSDARG00000060210 362 1.521 - 0.817 - - - 0.704 - - - D-2-hydroxyglutarate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-070112-482]
19. NUDT7 ENSDARG00000070387 32 1.508 - 0.755 - - - - 0.753 - - nudix (nucleoside diphosphate linked moiety X)-type motif 7 [Source:ZFIN;Acc:ZDB-GENE-131127-212]
20. rxrga ENSDARG00000005593 342 1.507 - 0.726 - - - - - 0.781 - retinoid x receptor, gamma a [Source:ZFIN;Acc:ZDB-GENE-980526-36]
21. CABZ01075125.1 ENSDARG00000102972 436 1.507 - 0.794 - - - - - 0.713 -
22. adrb3a ENSDARG00000053646 354 1.5 0.741 - - - - - - 0.759 - adrenoceptor beta 3a [Source:ZFIN;Acc:ZDB-GENE-080917-21]
23. timm50 ENSDARG00000031098, ENSDARG00000109900 988 1.497 0.725 - - - - - - 0.772 - translocase of inner mitochondrial membrane 50 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1618]
24. HAUS2 HAUS2 392 1.476 - 0.714 - - - - - 0.762 -
25. SUSD3 SUSD3 64 1.47 0.761 0.709 - - - - - - -
26. CLDND1 CLDND1 155 0.919 - - - - - - - 0.919 -
27. si:dkey-239h2.3 ENSDARG00000092033 398 0.919 - - - - - - - 0.919 - si:dkey-239h2.3 [Source:ZFIN;Acc:ZDB-GENE-081104-383]
28. bicc2 ENSDARG00000076557 77 0.906 - - - - - - - 0.906 - bicaudal C homolog 2 [Source:ZFIN;Acc:ZDB-GENE-110110-3]
29. knstrn ENSDARG00000074379 374 0.905 - - - - - - 0.905 - - kinetochore localized astrin (SPAG5) binding protein [Source:ZFIN;Acc:ZDB-GENE-081022-187]
30. grm7p grm7p 225 0.904 - 0.904 - - - - - - -
31. arl14 ENSDARG00000063223 211 0.904 - 0.904 - - - - - - - ADP-ribosylation factor-like 14 [Source:ZFIN;Acc:ZDB-GENE-070705-288]
32. dusp3a ENSDARG00000061255, ENSDARG00000113934 328 0.903 - - - - - - - 0.903 - dual specificity phosphatase 3a [Source:ZFIN;Acc:ZDB-GENE-111207-3]
33. lrp11 ENSDARG00000034076 313 0.898 - 0.898 - - - - - - - low density lipoprotein receptor-related protein 11 [Source:ZFIN;Acc:ZDB-GENE-030131-7847]
34. glis3 ENSDARG00000069726 59 0.897 - 0.897 - - - - - - - GLIS family zinc finger 3 [Source:ZFIN;Acc:ZDB-GENE-070112-2232]
35. hcrtr2 ENSDARG00000023722 70 0.897 - - - - - - - 0.897 - hypocretin (orexin) receptor 2 [Source:ZFIN;Acc:ZDB-GENE-070228-3]
36. dis3l2 ENSDARG00000033259 1509 0.896 - - - - - - - 0.896 - DIS3 like 3'-5' exoribonuclease 2 [Source:ZFIN;Acc:ZDB-GENE-070705-171]
37. lmbrd2a ENSDARG00000099566 15 0.896 - 0.896 - - - - - - - LMBR1 domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-050417-32]
38. sfrp1a ENSDARG00000035521 318 0.895 - - - - - - 0.895 - - secreted frizzled-related protein 1a [Source:ZFIN;Acc:ZDB-GENE-040310-5]
39. si:ch73-257c13.2 ENSDARG00000074305 197 0.894 - - - - - - - 0.894 - si:ch73-257c13.2 [Source:ZFIN;Acc:ZDB-GENE-081104-269]
40. CNOT6 CNOT6 168 0.893 - 0.893 - - - - - - -
41. PARP6_1 PARP6_1 331 0.892 - 0.892 - - - - - - -
42. lig4 ENSDARG00000060620 369 0.891 - 0.891 - - - - - - - ligase IV, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-070820-10]
43. zgc:101130 ENSDARG00000101926 924 0.891 - - - - - - - 0.891 - zgc:101130 [Source:ZFIN;Acc:ZDB-GENE-040801-72]
44. si:dkey-175g6.2 ENSDARG00000086665 39 0.889 - - - - - - - 0.889 - si:dkey-175g6.2 [Source:ZFIN;Acc:ZDB-GENE-030131-8061]
45. HMGXB4_1 HMGXB4_1 1122 0.889 - - - - - - - 0.889 -
46. mid1 ENSDARG00000060482 154 0.889 - 0.889 - - - - - - - midline 1 [Source:ZFIN;Acc:ZDB-GENE-110411-205]
47. VPRBP VPRBP 727 0.889 - - - - - - - 0.889 -
48. kcnk13a ENSDARG00000008212 136 0.888 - - - - - - - 0.888 - potassium channel, subfamily K, member 13a [Source:ZFIN;Acc:ZDB-GENE-080219-46]
49. si:ch211-64c10.1 si:ch211-64c10.1 21 0.888 - - - - - - - 0.888 -
50. nup133 ENSDARG00000010078 2373 0.887 - - - - - - - 0.887 - nucleoporin 133 [Source:ZFIN;Acc:ZDB-GENE-040426-2941]
51. CABZ01044943.1 CABZ01044943.1 309 0.886 - 0.886 - - - - - - -
52. RAPGEF4 ENSDARG00000079872 82 0.885 - - - - - - - 0.885 - Rap guanine nucleotide exchange factor (GEF) 4 [Source:ZFIN;Acc:ZDB-GENE-070912-385]
53. dab2ipb ENSDARG00000075110, ENSDARG00000117186 414 0.885 - - - - - - - 0.885 - DAB2 interacting protein b [Source:ZFIN;Acc:ZDB-GENE-030131-2449]
54. gpr37l1a ENSDARG00000006079 422 0.885 - 0.885 - - - - - - - G protein-coupled receptor 37 like 1a [Source:ZFIN;Acc:ZDB-GENE-110411-20]
55. c1ql3a ENSDARG00000010350 179 0.884 - 0.884 - - - - - - - complement component 1, q subcomponent-like 3a [Source:ZFIN;Acc:ZDB-GENE-080417-1]
56. trmt44 ENSDARG00000033957 133 0.884 - 0.884 - - - - - - - tRNA methyltransferase 44 homolog [Source:ZFIN;Acc:ZDB-GENE-041010-189]
57. si:ch211-71k14.1 ENSDARG00000087061 48 0.884 - - - - - - - 0.884 - si:ch211-71k14.1 [Source:ZFIN;Acc:ZDB-GENE-110411-283]
58. zgc:165515 ENSDARG00000116300 182 0.882 - - - - - - - 0.882 - zgc:165515 [Source:ZFIN;Acc:ZDB-GENE-030131-1772]
59. KLHL14 ENSDARG00000045275 155 0.882 - 0.882 - - - - - - - kelch-like family member 14 [Source:ZFIN;Acc:ZDB-GENE-091204-223]
60. tfb1m ENSDARG00000040727 142 0.881 - - - - - - - 0.881 - transcription factor B1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-060929-1010]
61. GRIK5 ENSDARG00000101449, ENSDARG00000111384 43 0.88 - - - - - - - 0.880 - glutamate receptor, ionotropic, kainate 5 [Source:ZFIN;Acc:ZDB-GENE-070821-6]
62. zdhhc7 ENSDARG00000019484 160 0.88 - 0.880 - - - - - - - zinc finger, DHHC-type containing 7 [Source:ZFIN;Acc:ZDB-GENE-040718-346]
63. si:dkey-22i16.9 ENSDARG00000095949 16 0.879 - 0.879 - - - - - - - si:dkey-22i16.9 [Source:ZFIN;Acc:ZDB-GENE-090313-261]
64. robo2 ENSDARG00000014891, ENSDARG00000078366 23 0.879 - 0.879 - - - - - - - roundabout, axon guidance receptor, homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-001019-1]
65. abcg2b ENSDARG00000079361, ENSDARG00000110043 11 0.879 - 0.879 - - - - - - - ATP-binding cassette, sub-family G (WHITE), member 2b [Source:ZFIN;Acc:ZDB-GENE-050517-36]
66. ENSDARG00000096199 ENSDARG00000096199 15 0.879 - 0.879 - - - - - - -
67. C1S ENSDARG00000100599 20 0.879 - 0.879 - - - - - - - complement component 1, s subcomponent [Source:ZFIN;Acc:ZDB-GENE-030131-1232]
68. snai3 ENSDARG00000031243 31 0.879 - 0.879 - - - - - - - snail family zinc finger 3 [Source:ZFIN;Acc:ZDB-GENE-061013-757]
69. si:dkeyp-4f2.3 ENSDARG00000096011, ENSDARG00000104584 5 0.879 - 0.879 - - - - - - - si:dkeyp-4f2.3 [Source:ZFIN;Acc:ZDB-GENE-110914-117]
70. CR391962.1 CR391962.1 31 0.879 - - - - - - - 0.879 -
71. spi1b ENSDARG00000000767 88 0.879 - 0.879 - - - - - - - Spi-1 proto-oncogene b [Source:ZFIN;Acc:ZDB-GENE-980526-164]
72. si:dkey-58f10.10 ENSDARG00000094284 4 0.879 - 0.879 - - - - - - - si:dkey-58f10.10 [Source:ZFIN;Acc:ZDB-GENE-060526-312]
73. themis ENSDARG00000010619 5 0.879 - 0.879 - - - - - - - thymocyte selection associated [Source:ZFIN;Acc:ZDB-GENE-041008-160]
74. CU469532.1 CU469532.1 31 0.879 - 0.879 - - - - - - -
75. trim35-38 trim35-38 3 0.879 - 0.879 - - - - - - -
76. cacna1aa ENSDARG00000037905 4 0.879 - 0.879 - - - - - - - calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, a [Source:ZFIN;Acc:ZDB-GENE-040724-26]
77. CU571315.2 ENSDARG00000101956 15 0.879 - 0.879 - - - - - - -
78. si:ch211-235f12.2 ENSDARG00000092119 31 0.879 - 0.879 - - - - - - - si:ch211-235f12.2 [Source:ZFIN;Acc:ZDB-GENE-050419-113]
79. ZDHHC12 ZDHHC12 29 0.879 - 0.879 - - - - - - -
80. SPOP ENSDARG00000100519 52 0.879 - 0.879 - - - - - - - speckle-type POZ protein [Source:ZFIN;Acc:ZDB-GENE-040426-1378]
81. adarb1a ENSDARG00000041609 476 0.879 - 0.879 - - - - - - - adenosine deaminase, RNA-specific, B1a [Source:ZFIN;Acc:ZDB-GENE-000627-2]
82. opn1mw4 ENSDARG00000000638 2 0.879 - 0.879 - - - - - - - opsin 1 (cone pigments), medium-wave-sensitive, 4 [Source:ZFIN;Acc:ZDB-GENE-990604-43]
83. LRRC52 ENSDARG00000090698 1 0.879 - 0.879 - - - - - - - leucine rich repeat containing 52 [Source:HGNC Symbol;Acc:HGNC:32156]
84. si:dkey-84h14.3 si:dkey-84h14.3 3 0.879 - 0.879 - - - - - - -
85. si:ch211-196c10.13 ENSDARG00000096756 28 0.879 - - - - - - - 0.879 - si:ch211-196c10.13 [Source:ZFIN;Acc:ZDB-GENE-130603-71]
86. valopb ENSDARG00000054181, ENSDARG00000110871 2 0.879 - 0.879 - - - - - - - vertebrate ancient long opsin b [Source:ZFIN;Acc:ZDB-GENE-040724-41]
87. zgc:114081 ENSDARG00000057899, ENSDARG00000113048 5 0.879 - 0.879 - - - - - - - zgc:114081 [Source:ZFIN;Acc:ZDB-GENE-050913-78]
88. si:ch73-91k6.1 18 0.879 - 0.879 - - - - - - - si:ch73-91k6.1
89. cdh4_1 ENSDARG00000015002, ENSDARG00000110803, ENSDARG00000110870 13 0.879 - 0.879 - - - - - - - cadherin 4, type 1, R-cadherin (retinal) [Source:ZFIN;Acc:ZDB-GENE-991207-1]
90. cacng5a ENSDARG00000003326 17 0.879 - 0.879 - - - - - - - calcium channel, voltage-dependent, gamma subunit 5a [Source:ZFIN;Acc:ZDB-GENE-120104-4]
91. skor1a ENSDARG00000069030 19 0.879 - 0.879 - - - - - - - SKI family transcriptional corepressor 1a [Source:ZFIN;Acc:ZDB-GENE-080722-5]
92. si:dkey-17e16.18 47 0.879 - 0.879 - - - - - - - si:dkey-17e16.18
93. si:dkey-270m17.3 si:dkey-270m17.3 1 0.879 - 0.879 - - - - - - -
94. ociad2 ENSDARG00000052336 102 0.879 - 0.879 - - - - - - - OCIA domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-041014-253]
95. nceh1b nceh1b 22 0.879 - 0.879 - - - - - - -
96. klc4_1 ENSDARG00000086985 22 0.879 - 0.879 - - - - - - - kinesin light chain 4 [Source:ZFIN;Acc:ZDB-GENE-050417-350]
97. ELFN1 ELFN1 59 0.879 - - - - - - - 0.879 -
98. KLHDC3 ENSDARG00000102772 14 0.879 - 0.879 - - - - - - - kelch domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2426]
99. kl ENSDARG00000079862 13 0.879 - - - - - - - 0.879 - klotho [Source:ZFIN;Acc:ZDB-GENE-110221-1]
100. si:ch73-25f10.6 ENSDARG00000091932 1 0.879 - 0.879 - - - - - - - si:ch73-25f10.6 [Source:ZFIN;Acc:ZDB-GENE-100922-192]

There are 955 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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