Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for sigmar1

Gene Name Gene ID Reads Annotation
sigmar1 ENSDARG00000011418 1240 sigma non-opioid intracellular receptor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1006]










Genes with expression patterns similar to sigmar1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. sigmar1 ENSDARG00000011418 1240 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 sigma non-opioid intracellular receptor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1006]
2. suz12b ENSDARG00000098924, ENSDARG00000114239, ENSDARG00000114524 1947 2.647 0.833 - - - - 0.884 0.930 - - SUZ12, polycomb repressive complex 2 subunit b [Source:ZFIN;Acc:ZDB-GENE-030131-3255]
3. zgc:163030 ENSDARG00000069192 2963 2.56 0.757 - - - - 0.854 0.949 - - zgc:163030 [Source:ZFIN;Acc:ZDB-GENE-060810-77]
4. tfam ENSDARG00000063145 4524 2.457 - 0.762 - - - 0.734 0.961 - - transcription factor A, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-061013-552]
5. gigfy2 3194 2.45 0.723 0.771 - - - - 0.956 - - GRB10 interacting GYF protein 2, transcript variant X1
6. FAR2 FAR2 1459 2.427 - - - - - - 0.978 0.739 0.710
7. adipor1b ENSDARG00000042717 1348 1.876 - - - - - 0.897 0.979 - - adiponectin receptor 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2896]
8. lamb4 ENSDARG00000039133 1220 1.858 - - - - - 0.898 0.960 - - laminin, beta 4 [Source:ZFIN;Acc:ZDB-GENE-021226-2]
9. fa2h ENSDARG00000090063 1084 1.853 - - - - - 0.951 0.902 - - fatty acid 2-hydroxylase [Source:ZFIN;Acc:ZDB-GENE-031219-4]
10. asb6 ENSDARG00000007125 389 1.836 0.844 - - - - - 0.992 - - ankyrin repeat and SOCS box containing 6 [Source:ZFIN;Acc:ZDB-GENE-050522-338]
11. tmem203 ENSDARG00000104996 1182 1.834 - - - - - 0.844 0.990 - - transmembrane protein 203 [Source:ZFIN;Acc:ZDB-GENE-040718-225]
12. NBEAL1 ENSDARG00000099547 1112 1.833 0.854 - - - - - 0.979 - - neurobeachin-like 1 [Source:ZFIN;Acc:ZDB-GENE-130530-544]
13. acn9 acn9 520 1.832 - - - - - 0.838 0.994 - -
14. FUCA1 FUCA1 1446 1.83 0.871 - - - - - 0.959 - -
15. suds3 ENSDARG00000073737, ENSDARG00000116918 2416 1.828 0.853 - - - - - 0.975 - - SDS3 homolog, SIN3A corepressor complex component [Source:ZFIN;Acc:ZDB-GENE-040801-236]
16. PSD PSD 367 1.82 0.829 - - - - - 0.991 - -
17. itpkcb ENSDARG00000067741 2370 1.819 0.846 - - - - - 0.973 - - inositol-trisphosphate 3-kinase Cb [Source:ZFIN;Acc:ZDB-GENE-080225-27]
18. dyrk1b ENSDARG00000070187 2777 1.8 0.831 - - - - - 0.969 - - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B [Source:ZFIN;Acc:ZDB-GENE-060503-499]
19. dnajb9a ENSDARG00000052072 578 1.777 - - - - - 0.783 0.994 - - DnaJ (Hsp40) homolog, subfamily B, member 9a [Source:ZFIN;Acc:ZDB-GENE-050626-115]
20. grk5 ENSDARG00000032801 490 1.776 - - - - - 0.799 0.977 - - G protein-coupled receptor kinase 5 [Source:ZFIN;Acc:ZDB-GENE-091204-274]
21. ik ENSDARG00000004161 3132 1.775 - - - - - 0.795 0.980 - - IK cytokine [Source:ZFIN;Acc:ZDB-GENE-030131-960]
22. ABI3_1 ABI3_1 511 1.769 - - - - - 0.799 0.970 - -
23. CACHD1 ENSDARG00000061590 1287 1.764 - - - - - 0.780 0.984 - - cache domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100819-3]
24. rab11al ENSDARG00000014340 2116 1.756 - - - - - - 0.915 0.841 - RAB11a, member RAS oncogene family, like [Source:ZFIN;Acc:ZDB-GENE-031118-188]
25. cux1b ENSDARG00000043134 641 1.755 - - - - - 0.765 0.990 - - cut-like homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-040801-260]
26. rad51 ENSDARG00000041411, ENSDARG00000111948 1056 1.755 0.768 - - - - - 0.987 - - RAD51 recombinase [Source:ZFIN;Acc:ZDB-GENE-040426-2286]
27. CABZ01084815.1 CABZ01084815.1 351 1.752 - - - - - 0.772 0.980 - -
28. myof ENSDARG00000006112 618 1.744 0.778 - - - - - 0.966 - - myoferlin [Source:ZFIN;Acc:ZDB-GENE-040426-1138]
29. gbas gbas 735 1.743 - - - - - 0.747 0.996 - -
30. atl3 ENSDARG00000004270 2806 1.742 - - - - - 0.793 0.949 - - atlastin 3 [Source:ZFIN;Acc:ZDB-GENE-041010-109]
31. nfya ENSDARG00000042004, ENSDARG00000114231 6606 1.738 - 0.768 - - - - 0.970 - - nuclear transcription factor Y, alpha [Source:ZFIN;Acc:ZDB-GENE-010501-1]
32. tmem181 ENSDARG00000045910 2288 1.738 0.749 - - - - - 0.989 - - transmembrane protein 181 [Source:ZFIN;Acc:ZDB-GENE-060503-309]
33. ef1 1343 1.737 - - - - - 0.811 0.926 - - E74-like factor 1 (ets domain transcription factor), transcript variant X4
34. mrpl24 ENSDARG00000019222 798 1.731 - - - - - 0.745 0.986 - - mitochondrial ribosomal protein L24 [Source:ZFIN;Acc:ZDB-GENE-040718-98]
35. dnajc9 ENSDARG00000031293, ENSDARG00000111989 4082 1.713 - 0.730 - - - - 0.983 - - DnaJ (Hsp40) homolog, subfamily C, member 9 [Source:ZFIN;Acc:ZDB-GENE-040718-130]
36. mpzl3 959 1.713 0.743 - - - - - 0.970 - - myelin protein zero-like 3
37. cxcl14 ENSDARG00000056627, ENSDARG00000113190 4665 1.701 0.760 - - - - - 0.941 - - chemokine (C-X-C motif) ligand 14 [Source:ZFIN;Acc:ZDB-GENE-000619-1]
38. TMEM184B TMEM184B 1280 1.7 - - - - - 0.708 0.992 - -
39. CU929378.1 CU929378.1 514 1.699 - - - - - - 0.981 - 0.718
40. etfdh ENSDARG00000038834 1811 1.688 0.712 - - - - - 0.976 - - electron transfer flavoprotein dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040912-168]
41. ubl3a ENSDARG00000099532, ENSDARG00000113955 3475 1.688 - - - - - 0.733 0.955 - - ubiquitin-like 3a [Source:ZFIN;Acc:ZDB-GENE-030131-3431]
42. slc9a6a ENSDARG00000009209, ENSDARG00000111329 184 1.686 0.875 - - - - 0.811 - - - solute carrier family 9, subfamily A (NHE6, cation proton antiporter 6), member 6a [Source:ZFIN;Acc:ZDB-GENE-070424-104]
43. tnikb ENSDARG00000009031 1836 1.658 - - - - - 0.806 0.852 - - TRAF2 and NCK interacting kinase b [Source:ZFIN;Acc:ZDB-GENE-051113-320]
44. psmd7 ENSDARG00000102417 4732 1.647 - - - - - 0.719 0.928 - - proteasome 26S subunit, non-ATPase 7 [Source:ZFIN;Acc:ZDB-GENE-030131-5541]
45. safb ENSDARG00000020467 5608 1.645 - - - - - 0.702 0.943 - - scaffold attachment factor B [Source:ZFIN;Acc:ZDB-GENE-030131-698]
46. PRSS23 ENSDARG00000055786 564 1.642 0.825 - - - - 0.817 - - - serine protease 23 [Source:ZFIN;Acc:ZDB-GENE-030131-9149]
47. sh3d19_1 ENSDARG00000088202, ENSDARG00000114126, ENSDARG00000117115 90 1.62 0.818 - - - - 0.802 - - - SH3 domain containing 19 [Source:ZFIN;Acc:ZDB-GENE-050522-481]
48. prkcda ENSDARG00000009208 1508 1.617 - - - - - 0.741 0.876 - - protein kinase C, delta a [Source:ZFIN;Acc:ZDB-GENE-030131-6503]
49. bc2 5213 1.61 0.780 - - - - 0.830 - - - putative breast adenocarcinoma marker
50. cldn7b ENSDARG00000014047, ENSDARG00000114912 2960 1.604 0.768 - - - - 0.836 - - - claudin 7b [Source:ZFIN;Acc:ZDB-GENE-001103-5]
51. smim8 ENSDARG00000071040 622 1.6 0.801 - - - - 0.799 - - - small integral membrane protein 8 [Source:ZFIN;Acc:ZDB-GENE-050522-423]
52. PVRL4_1 PVRL4_1 702 1.597 0.897 - - - - 0.700 - - -
53. gtf2e2 ENSDARG00000012672, ENSDARG00000109689, ENSDARG00000115211 1677 1.594 - 0.811 - - - 0.783 - - - general transcription factor IIE, polypeptide 2, beta [Source:ZFIN;Acc:ZDB-GENE-030131-6794]
54. ck2b ck2b 781 1.59 0.842 - - - - 0.748 - - -
55. GPR31 431 1.581 - 0.731 - - - 0.850 - - - G protein-coupled receptor 31
56. med6 ENSDARG00000034734 2711 1.579 0.792 - - - - 0.787 - - - mediator complex subunit 6 [Source:ZFIN;Acc:ZDB-GENE-040625-61]
57. tmem180 tmem180 430 1.577 0.845 - - - - 0.732 - - -
58. atg4c ENSDARG00000044373 979 1.568 0.839 - - - - - - - 0.729 autophagy related 4C, cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-040625-84]
59. me3 ENSDARG00000002305 3305 1.564 0.852 - - - - 0.712 - - - malic enzyme 3, NADP(+)-dependent, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-041111-294]
60. C2CD2 ENSDARG00000105000 2573 1.563 - 0.757 - - - 0.806 - - - C2 calcium-dependent domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-110728-1]
61. C3H16orf58 C3H16orf58 487 1.562 - - - - - 0.793 - - 0.769
62. frmd6 ENSDARG00000002332 2698 1.562 0.756 - - - - 0.806 - - - FERM domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-050522-354]
63. rab6bb ENSDARG00000031343 1381 1.553 0.766 - - - - - - 0.787 - RAB6B, member RAS oncogene family b [Source:ZFIN;Acc:ZDB-GENE-050320-28]
64. gpx7 ENSDARG00000091511 3045 1.544 0.754 - - - - 0.790 - - - glutathione peroxidase 7 [Source:ZFIN;Acc:ZDB-GENE-050522-419]
65. slc20a1b ENSDARG00000010641 2564 1.535 0.817 - - - - 0.718 - - - solute carrier family 20 (phosphate transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-260]
66. adamts1 ENSDARG00000103519 539 1.528 0.710 - - - - 0.818 - - - ADAM metallopeptidase with thrombospondin type 1 motif, 1 [Source:ZFIN;Acc:ZDB-GENE-070814-1]
67. arl14ep ENSDARG00000001210 3029 1.523 0.708 0.815 - - - - - - - ADP-ribosylation factor-like 14 effector protein [Source:ZFIN;Acc:ZDB-GENE-060825-216]
68. CABZ01057013.1 CABZ01057013.1 1308 1.52 0.820 - - - - 0.700 - - -
69. gpcpd1 ENSDARG00000016011 2563 1.516 - - - - - 0.770 0.746 - - glycerophosphocholine phosphodiesterase 1 [Source:ZFIN;Acc:ZDB-GENE-060503-472]
70. fbl ENSDARG00000053912 5891 1.514 0.752 - - - - 0.762 - - - fibrillarin [Source:ZFIN;Acc:ZDB-GENE-040426-1936]
71. GOLPH3 ENSDARG00000052851, ENSDARG00000109334 3117 1.513 0.749 0.764 - - - - - - - golgi phosphoprotein 3 [Source:ZFIN;Acc:ZDB-GENE-041010-209]
72. degs2 ENSDARG00000042544 1912 1.512 0.701 - - - - 0.811 - - - delta(4)-desaturase, sphingolipid 2 [Source:ZFIN;Acc:ZDB-GENE-080228-1]
73. slc39a7 ENSDARG00000104451 6368 1.51 0.767 - - - - 0.743 - - - solute carrier family 39 (zinc transporter), member 7 [Source:ZFIN;Acc:ZDB-GENE-991110-20]
74. uqcc uqcc 4742 1.506 - - - - - 0.715 0.791 - -
75. alox12 ENSDARG00000069463 5787 1.502 - - - - - 0.778 0.724 - - arachidonate 12-lipoxygenase [Source:ZFIN;Acc:ZDB-GENE-030131-1452]
76. TMEM14A ENSDARG00000095157 611 1.501 0.783 0.718 - - - - - - - transmembrane protein 14A [Source:HGNC Symbol;Acc:HGNC:21076]
77. trim55b ENSDARG00000058158 586 1.491 0.738 - - - - 0.753 - - - tripartite motif containing 55b [Source:ZFIN;Acc:ZDB-GENE-060312-37]
78. tmem18 ENSDARG00000036704 1784 1.479 - - - - - 0.703 - 0.776 - transmembrane protein 18 [Source:ZFIN;Acc:ZDB-GENE-040927-26]
79. acadl ENSDARG00000088357, ENSDARG00000115321 1179 1.478 - - - - - 0.758 - 0.720 - acyl-CoA dehydrogenase long chain [Source:ZFIN;Acc:ZDB-GENE-040426-771]
80. CDH26 CDH26 938 1.478 0.775 - 0.703 - - - - - -
81. kbp kbp 701 1.468 - - - - 0.747 0.721 - - -
82. timm10b ENSDARG00000043898 1233 0.996 - - - - - - 0.996 - - translocase of inner mitochondrial membrane 10 homolog B (yeast) [Source:ZFIN;Acc:ZDB-GENE-050417-370]
83. agk ENSDARG00000009837, ENSDARG00000113514 811 0.996 - - - - - - 0.996 - - acylglycerol kinase [Source:ZFIN;Acc:ZDB-GENE-030131-6202]
84. papolg ENSDARG00000012141 1445 0.995 - - - - - - 0.995 - - poly(A) polymerase gamma [Source:ZFIN;Acc:ZDB-GENE-040426-1256]
85. asb12a ENSDARG00000017086, ENSDARG00000110715 4230 0.995 - - - - - - 0.995 - - ankyrin repeat and SOCS box-containing 12a [Source:ZFIN;Acc:ZDB-GENE-030131-1647]
86. dhdds ENSDARG00000039851 1135 0.995 - - - - - - 0.995 - - dehydrodolichyl diphosphate synthase [Source:ZFIN;Acc:ZDB-GENE-040426-2236]
87. laptm4a ENSDARG00000006397 1698 0.995 - - - - - - 0.995 - - lysosomal protein transmembrane 4 alpha [Source:ZFIN;Acc:ZDB-GENE-030131-1024]
88. kdm5ba ENSDARG00000057093, ENSDARG00000111539 3302 0.995 - - - - - - 0.995 - - lysine (K)-specific demethylase 5Ba [Source:ZFIN;Acc:ZDB-GENE-030131-5379]
89. SPEN ENSDARG00000074245, ENSDARG00000116696 1412 0.995 - - - - - - 0.995 - - spen family transcriptional repressor [Source:ZFIN;Acc:ZDB-GENE-050309-70]
90. smc5 ENSDARG00000044282 779 0.994 - - - - - - 0.994 - - structural maintenance of chromosomes 5 [Source:ZFIN;Acc:ZDB-GENE-061013-288]
91. rras2 ENSDARG00000036252, ENSDARG00000111642 1714 0.994 - - - - - - 0.994 - - RAS related 2 [Source:ZFIN;Acc:ZDB-GENE-050417-352]
92. CAPN5 CAPN5 357 0.994 - - - - - - 0.994 - -
93. zgc:153372 ENSDARG00000068967 358 0.994 - - - - - - 0.994 - - zgc:153372 [Source:ZFIN;Acc:ZDB-GENE-060929-680]
94. lzic ENSDARG00000055899 638 0.994 - - - - - - 0.994 - - leucine zipper and CTNNBIP1 domain containing [Source:ZFIN;Acc:ZDB-GENE-040718-342]
95. mrps7 ENSDARG00000101622 889 0.994 - - - - - - 0.994 - - mitochondrial ribosomal protein S7 [Source:ZFIN;Acc:ZDB-GENE-050809-112]
96. si:ch211-241o7.5 si:ch211-241o7.5 1387 0.994 - - - - - - 0.994 - -
97. igfbp3 ENSDARG00000099144 269 0.994 - - - - - - 0.994 - - insulin-like growth factor binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-040412-1]
98. zgc:136763 zgc:136763 190 0.994 - - - - - - 0.994 - -
99. DUSP23_1 DUSP23_1 1085 0.994 - - - - - - 0.994 - -
100. AMDHD1 ENSDARG00000007366 89 0.993 - - - - - - 0.993 - - amidohydrolase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:28577]

There are 1304 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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