Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for siah1

Gene Name Gene ID Reads Annotation
siah1 ENSDARG00000030871 1590 siah E3 ubiquitin protein ligase 1 [Source:ZFIN;Acc:ZDB-GENE-010319-31]










Genes with expression patterns similar to siah1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. siah1 ENSDARG00000030871 1590 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 siah E3 ubiquitin protein ligase 1 [Source:ZFIN;Acc:ZDB-GENE-010319-31]
2. znf292b ENSDARG00000043973 3791 2.517 - 0.780 - - - - 0.830 0.907 - zinc finger protein 292b [Source:ZFIN;Acc:ZDB-GENE-030131-9559]
3. chd4a ENSDARG00000063535, ENSDARG00000111791 4059 2.443 - 0.747 - - - - 0.846 0.850 - chromodomain helicase DNA binding protein 4a [Source:ZFIN;Acc:ZDB-GENE-041111-187]
4. sumo3b ENSDARG00000035993 3414 2.378 - 0.741 - - - - 0.851 0.786 - small ubiquitin-like modifier 3b [Source:ZFIN;Acc:ZDB-GENE-040718-426]
5. map3k7 ENSDARG00000020469 2845 2.347 - 0.721 - - - 0.717 - - 0.909 mitogen-activated protein kinase kinase kinase 7 [Source:ZFIN;Acc:ZDB-GENE-041001-135]
6. TMEM218 ENSDARG00000027129 716 1.883 - - - - - - - 0.952 0.931 transmembrane protein 218 [Source:ZFIN;Acc:ZDB-GENE-040426-1232]
7. kidins220b ENSDARG00000017338 1937 1.88 - - - - - - - 0.960 0.920 kinase D-interacting substrate 220b [Source:ZFIN;Acc:ZDB-GENE-030131-7824]
8. NAIF1 ENSDARG00000062753 696 1.878 - 0.933 - - - - - - 0.945 nuclear apoptosis inducing factor 1 [Source:ZFIN;Acc:ZDB-GENE-081104-236]
9. faub ENSDARG00000043663, ENSDARG00000111416, ENSDARG00000113054 1451 1.877 - 0.970 - - - - - - 0.907 Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed b [Source:ZFIN;Acc:ZDB-GENE-050417-416]
10. pank1b ENSDARG00000010098 3202 1.854 - - - - - - - 0.920 0.934 pantothenate kinase 1b [Source:ZFIN;Acc:ZDB-GENE-070209-259]
11. ARHGEF15 ENSDARG00000100293 553 1.844 - 0.931 - - - - - - 0.913 Rho guanine nucleotide exchange factor (GEF) 15 [Source:ZFIN;Acc:ZDB-GENE-060526-292]
12. hmmr ENSDARG00000021794, ENSDARG00000111088 2009 1.843 - 0.940 - - - - - - 0.903 hyaluronan-mediated motility receptor (RHAMM) [Source:ZFIN;Acc:ZDB-GENE-030131-731]
13. stk35l ENSDARG00000057497 3582 1.833 - - - - - - - 0.948 0.885 serine/threonine kinase 35, like [Source:ZFIN;Acc:ZDB-GENE-041212-52]
14. plekhh1 ENSDARG00000053835 2123 1.823 - - - - - - - 0.889 0.934 pleckstrin homology domain containing, family H (with MyTH4 domain) member 1 [Source:ZFIN;Acc:ZDB-GENE-061219-1]
15. ppp1r7 ENSDARG00000009740 2606 1.818 - 0.948 - - - - - 0.870 - protein phosphatase 1, regulatory (inhibitor) subunit 7 [Source:ZFIN;Acc:ZDB-GENE-051113-288]
16. mark3 mark3 1375 1.802 - 0.868 - - - - - - 0.934
17. dctn3 ENSDARG00000041363 3351 1.797 - - - - - - - 0.854 0.943 dynactin 3 (p22) [Source:ZFIN;Acc:ZDB-GENE-040704-65]
18. dusp11 ENSDARG00000038156 2490 1.794 - - - - - - - 0.865 0.929 dual specificity phosphatase 11 (RNA/RNP complex 1-interacting) [Source:ZFIN;Acc:ZDB-GENE-050417-226]
19. TP53BP1 ENSDARG00000079000 997 1.792 - 0.857 - - - - - - 0.935 tumor protein p53 binding protein, 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3695]
20. zgc:174906 ENSDARG00000075314 2187 1.79 - - - - - - 0.862 0.928 - zgc:174906 [Source:ZFIN;Acc:ZDB-GENE-030131-6125]
21. ddx6 ENSDARG00000061338 2514 1.787 - - - - - - - 0.857 0.930 DEAD (Asp-Glu-Ala-Asp) box helicase 6 [Source:ZFIN;Acc:ZDB-GENE-070912-83]
22. ulk1b ENSDARG00000074481 1212 1.784 - 0.928 - - - - 0.856 - - unc-51 like autophagy activating kinase 1 [Source:ZFIN;Acc:ZDB-GENE-071203-2]
23. pcnxl4 377 1.783 - 0.936 - - - - 0.847 - - pecanex-like 4 (Drosophila), transcript variant X2
24. nucb1 ENSDARG00000054833 2009 1.783 - 0.852 - - - - - - 0.931 nucleobindin 1 [Source:ZFIN;Acc:ZDB-GENE-060825-222]
25. uck2b ENSDARG00000022213 1542 1.783 - 0.838 - - - - - - 0.945 uridine-cytidine kinase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5265]
26. snai1a ENSDARG00000056995 1427 1.782 - 0.833 - - - - - 0.949 - snail family zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-990415-255]
27. cnpy1 ENSDARG00000003757 1132 1.772 - 0.850 - - - - - - 0.922 canopy FGF signaling regulator 1 [Source:ZFIN;Acc:ZDB-GENE-060315-3]
28. pou2f1b ENSDARG00000007996 2172 1.768 - 0.934 - - - - 0.834 - - POU class 2 homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2422]
29. ap2b1 ENSDARG00000035152 2912 1.768 - - - - - - - 0.850 0.918 adaptor related protein complex 2 subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6564]
30. KIAA0355 3250 1.766 - 0.886 - - - - - - 0.880 KIAA0355 ortholog, transcript variant X1
31. prpf31 ENSDARG00000095904 526 1.764 - - - - - - 0.806 0.958 - PRP31 pre-mRNA processing factor 31 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1561]
32. rqcd1 2301 1.76 - 0.820 - - - - - - 0.940 RCD1 required for cell differentiation1 homolog (S. pombe)
33. uchl5 ENSDARG00000103404, ENSDARG00000110434 4029 1.759 - 0.809 - - - - - 0.950 - ubiquitin carboxyl-terminal hydrolase L5 [Source:ZFIN;Acc:ZDB-GENE-040426-2051]
34. ptgs2a ENSDARG00000004539 1207 1.758 - 0.871 - - - - - - 0.887 prostaglandin-endoperoxide synthase 2a [Source:ZFIN;Acc:ZDB-GENE-020530-2]
35. vdac1 ENSDARG00000045132 8051 1.738 - 0.939 - - - - 0.799 - - voltage-dependent anion channel 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6514]
36. sppl2 ENSDARG00000030448 1040 1.737 - 0.869 - - - - - 0.868 - signal peptide peptidase-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4265]
37. optn ENSDARG00000002663, ENSDARG00000111364 1440 1.727 - 0.827 - - - - - 0.900 - optineurin [Source:ZFIN;Acc:ZDB-GENE-030131-8103]
38. cbx1b ENSDARG00000054442 1206 1.72 - - - - - - 0.769 - 0.951 chromobox homolog 1b (HP1 beta homolog Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040625-68]
39. arid2 ENSDARG00000007413 4413 1.715 - - - - - - 0.831 0.884 - AT rich interactive domain 2 (ARID, RFX-like) [Source:ZFIN;Acc:ZDB-GENE-030131-6311]
40. ilf3a ENSDARG00000058660, ENSDARG00000116860 3760 1.714 - 0.869 - - - - - - 0.845 interleukin enhancer binding factor 3a [Source:ZFIN;Acc:ZDB-GENE-030131-3151]
41. eif4h ENSDARG00000042252 6742 1.713 - - - - - - 0.778 0.935 - eukaryotic translation initiation factor 4h [Source:ZFIN;Acc:ZDB-GENE-010328-19]
42. strbp ENSDARG00000021455 1279 1.709 - - - - - 0.776 - - 0.933 spermatid perinuclear RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030729-18]
43. pcnp ENSDARG00000037713 2754 1.708 - 0.796 - - - - - - 0.912 PEST proteolytic signal containing nuclear protein [Source:ZFIN;Acc:ZDB-GENE-041010-130]
44. limk2 ENSDARG00000005104 2598 1.702 - - - - - - - 0.828 0.874 LIM domain kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040718-398]
45. irx5a ENSDARG00000034043 1694 1.699 - - - - - - 0.732 0.967 - iroquois homeobox 5a [Source:ZFIN;Acc:ZDB-GENE-010716-2]
46. vps36 ENSDARG00000057021 636 1.699 - - - - - 0.750 - 0.949 - vacuolar protein sorting 36 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-7753]
47. olfm1b ENSDARG00000014053 1392 1.696 - - - - - - 0.743 0.953 - olfactomedin 1b [Source:ZFIN;Acc:ZDB-GENE-040801-228]
48. hoxa3a ENSDARG00000103862 2239 1.689 - - - - - - 0.770 0.919 - homeobox A3a [Source:ZFIN;Acc:ZDB-GENE-000823-3]
49. klf7a ENSDARG00000073857 1226 1.688 - - - - - - 0.760 - 0.928 Kruppel-like factor 7a [Source:ZFIN;Acc:ZDB-GENE-050522-276]
50. BX571949.1 BX571949.1 293 1.688 0.760 - - - - - - - 0.928
51. pou4f1 ENSDARG00000005559 821 1.686 - 0.965 - - - - 0.721 - - POU class 4 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-000523-2]
52. nedd8 ENSDARG00000007989 3896 1.685 - 0.868 - - - 0.817 - - - neural precursor cell expressed, developmentally down-regulated 8 [Source:ZFIN;Acc:ZDB-GENE-030616-588]
53. myeov2 3351 1.683 - - - - - 0.812 - - 0.871 myeloma overexpressed 2
54. lrig1 ENSDARG00000075625 2027 1.683 - 0.848 - - - - - 0.835 - leucine-rich repeats and immunoglobulin-like domains 1 [Source:ZFIN;Acc:ZDB-GENE-031113-23]
55. gtf2f2a ENSDARG00000069910 1027 1.68 - 0.872 - - - 0.808 - - - general transcription factor IIF, polypeptide 2a [Source:ZFIN;Acc:ZDB-GENE-040625-131]
56. atcaya ENSDARG00000071678 344 1.68 - - - - - - 0.721 0.959 - ataxia, cerebellar, Cayman type a [Source:ZFIN;Acc:ZDB-GENE-070705-185]
57. rab11al ENSDARG00000014340 2116 1.678 - - - - - 0.754 - - 0.924 RAB11a, member RAS oncogene family, like [Source:ZFIN;Acc:ZDB-GENE-031118-188]
58. lhx1a ENSDARG00000014018 958 1.678 - - - - - - 0.711 0.967 - LIM homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-347]
59. nkx6.2 ENSDARG00000104735 5081 1.677 - - - - - - 0.775 0.902 - NK6 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-070626-1]
60. pacsin1b ENSDARG00000042128 1051 1.675 - - - - - - 0.773 0.902 - protein kinase C and casein kinase substrate in neurons 1b [Source:ZFIN;Acc:ZDB-GENE-050913-35]
61. thoc7 ENSDARG00000015394 3824 1.674 - - - - - - 0.766 - 0.908 THO complex 7 [Source:ZFIN;Acc:ZDB-GENE-040801-17]
62. gipc1 ENSDARG00000104483 2913 1.663 - - - - - - 0.784 - 0.879 GIPC PDZ domain containing family, member 1 [Source:ZFIN;Acc:ZDB-GENE-060726-1]
63. sec22a ENSDARG00000078328 1207 1.662 - 0.943 - - - - 0.719 - - SEC22 homolog A, vesicle trafficking protein [Source:ZFIN;Acc:ZDB-GENE-030131-3553]
64. scinla_1 ENSDARG00000102415, ENSDARG00000117110 544 1.66 - 0.958 - - - 0.702 - - - scinderin like a [Source:ZFIN;Acc:ZDB-GENE-030131-2005]
65. surf1 ENSDARG00000003592 551 1.659 - 0.945 - - - - 0.714 - - surfeit 1 [Source:ZFIN;Acc:ZDB-GENE-041108-2]
66. si:dkey-27i16.3 si:dkey-27i16.3 494 1.659 - 0.946 - - - 0.713 - - -
67. klf15 ENSDARG00000091127 1037 1.658 - 0.855 - - - 0.803 - - - Kruppel-like factor 15 [Source:ZFIN;Acc:ZDB-GENE-030131-7844]
68. cadpsb ENSDARG00000070567 458 1.656 - - - - - - 0.709 0.947 - Ca2+-dependent activator protein for secretion b [Source:ZFIN;Acc:ZDB-GENE-110621-2]
69. usp7 ENSDARG00000073710 7017 1.654 - - - - - 0.820 - 0.834 - ubiquitin specific peptidase 7 (herpes virus-associated) [Source:ZFIN;Acc:ZDB-GENE-030131-3656]
70. CYTH2 ENSDARG00000028800 2349 1.651 - - - - - - 0.722 0.929 - cytohesin 2 [Source:HGNC Symbol;Acc:HGNC:9502]
71. cdc20 ENSDARG00000100741 3264 1.65 - - - - - 0.750 - - 0.900 cell division cycle 20 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2044]
72. psmb6 ENSDARG00000002240 8015 1.647 - - - - - 0.734 - 0.913 - proteasome subunit beta 6 [Source:ZFIN;Acc:ZDB-GENE-990415-216]
73. e2f8 ENSDARG00000057323 1432 1.647 - 0.937 - - - - 0.710 - - E2F transcription factor 8 [Source:ZFIN;Acc:ZDB-GENE-041111-260]
74. dpysl5b ENSDARG00000059311 600 1.642 - - - - - - 0.709 - 0.933 dihydropyrimidinase-like 5b [Source:ZFIN;Acc:ZDB-GENE-050720-4]
75. CBFA2T3 ENSDARG00000079012 6799 1.641 - - - - - - 0.861 0.780 - core-binding factor, runt domain, alpha subunit 2; translocated to, 3 [Source:ZFIN;Acc:ZDB-GENE-070209-2]
76. rsph4a ENSDARG00000067606 132 1.639 0.721 - - - - - - - 0.918 radial spoke head component 4A [Source:ZFIN;Acc:ZDB-GENE-030131-7437]
77. slc39a6 ENSDARG00000068143 1039 1.635 - - - - - - 0.700 - 0.935 solute carrier family 39 (zinc transporter), member 6 [Source:ZFIN;Acc:ZDB-GENE-030131-3023]
78. ddx23 ENSDARG00000021945, ENSDARG00000116153 2265 1.634 - - - - - 0.739 - 0.895 - DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Source:ZFIN;Acc:ZDB-GENE-030131-6215]
79. lrrtm1 ENSDARG00000052713 1041 1.63 - - - - - - 0.700 0.930 - leucine rich repeat transmembrane neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-050506-80]
80. taf10 ENSDARG00000068641 3333 1.63 - - - - - - 0.735 - 0.895 TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-060526-334]
81. pvrl1b 1645 1.627 - 0.905 - - - 0.722 - - - poliovirus receptor-related 1b
82. ccnb1 ENSDARG00000051923 3226 1.626 - 0.842 - - - 0.784 - - - cyclin B1 [Source:ZFIN;Acc:ZDB-GENE-000406-10]
83. cldn7b ENSDARG00000014047, ENSDARG00000114912 2960 1.624 - - - - - 0.734 - - 0.890 claudin 7b [Source:ZFIN;Acc:ZDB-GENE-001103-5]
84. tgif1 ENSDARG00000059337 4020 1.624 - - - - - - 0.739 0.885 - TGFB-induced factor homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030131-475]
85. g3bp1 ENSDARG00000017741 7622 1.623 - - - - - - 0.747 0.876 - GTPase activating protein (SH3 domain) binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7452]
86. clk4b ENSDARG00000005908 915 1.621 - - - - - 0.715 - 0.906 - CDC-like kinase 4b [Source:ZFIN;Acc:ZDB-GENE-050227-19]
87. RSF1_2 RSF1_2 1343 1.621 - - - - - - 0.713 0.908 -
88. xylt1 ENSDARG00000061248 2357 1.62 - - - - - - 0.702 0.918 - xylosyltransferase I [Source:ZFIN;Acc:ZDB-GENE-111017-2]
89. lsm6 ENSDARG00000036995 4377 1.62 - - - - - - 0.752 - 0.868 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-040625-50]
90. ylpm1 ENSDARG00000043680 7676 1.619 - 0.737 - - - - 0.882 - - YLP motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2196]
91. tmed7 ENSDARG00000046022 2435 1.614 - 0.752 - - - - - 0.862 - transmembrane p24 trafficking protein 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2570]
92. ctbp2 ctbp2 3255 1.611 - - - - - - 0.751 - 0.860
93. BX511121.1 ENSDARG00000029997 1774 1.608 - - - - - - 0.701 - 0.907
94. txnl4a ENSDARG00000036190 2048 1.604 - - - - - - 0.733 0.871 - thioredoxin-like 4A [Source:ZFIN;Acc:ZDB-GENE-041010-25]
95. eif5 ENSDARG00000003681 7986 1.602 - - - - - 0.729 - - 0.873 eukaryotic translation initiation factor 5 [Source:ZFIN;Acc:ZDB-GENE-030131-975]
96. uchl1 ENSDARG00000026871 1578 1.599 - 0.820 - - - - 0.779 - - ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase) [Source:ZFIN;Acc:ZDB-GENE-030131-3844]
97. kmt2e ENSDARG00000007523 1851 1.596 - 0.860 - - - 0.736 - - - lysine (K)-specific methyltransferase 2E [Source:ZFIN;Acc:ZDB-GENE-030131-4120]
98. ppig ENSDARG00000044431 3427 1.595 - - - - - 0.735 - 0.860 - peptidylprolyl isomerase G (cyclophilin G) [Source:ZFIN;Acc:ZDB-GENE-040426-2822]
99. efhd2 ENSDARG00000055759 7777 1.593 - 0.765 - - - 0.828 - - - EF-hand domain family, member D2 [Source:ZFIN;Acc:ZDB-GENE-060531-152]
100. ddx39ab ENSDARG00000015111 11619 1.593 - - - - - - 0.800 0.793 - DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Ab [Source:ZFIN;Acc:ZDB-GENE-040426-2902]

There are 2247 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA