Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:rp71-61h23.4

Gene Name Gene ID Reads Annotation
si:rp71-61h23.4 1921 si:rp71-61h23.4










Genes with expression patterns similar to si:rp71-61h23.4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:rp71-61h23.4 1921 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:rp71-61h23.4
2. derl1 ENSDARG00000021905 4698 1.864 - 0.982 - - - - - - 0.882 derlin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2793]
3. galnt12 ENSDARG00000055490 1653 1.818 0.871 0.947 - - - - - - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 [Source:ZFIN;Acc:ZDB-GENE-060503-704]
4. ik ENSDARG00000004161 3132 1.803 - 0.946 - - - - - - 0.857 IK cytokine [Source:ZFIN;Acc:ZDB-GENE-030131-960]
5. st8sia2 ENSDARG00000018788 2183 1.796 - 0.951 - - - - - - 0.845 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-020919-4]
6. prkci ENSDARG00000021225 2472 1.795 0.844 0.951 - - - - - - - protein kinase C, iota [Source:ZFIN;Acc:ZDB-GENE-011105-1]
7. CABZ01111604.1 CABZ01111604.1 140 1.793 0.844 0.949 - - - - - - -
8. cyp2aa9 ENSDARG00000098890 839 1.782 0.815 0.967 - - - - - - - cytochrome P450, family 2, subfamily AA, polypeptide 9 [Source:ZFIN;Acc:ZDB-GENE-080724-3]
9. UBL4A UBL4A 1115 1.78 - 0.945 - - - - - - 0.835
10. otub1b ENSDARG00000011462 4329 1.772 - 0.909 - - - - - - 0.863 OTU deubiquitinase, ubiquitin aldehyde binding 1b [Source:ZFIN;Acc:ZDB-GENE-040718-204]
11. mcts1 ENSDARG00000025972 4662 1.769 - 0.935 - - - - - - 0.834 malignant T cell amplified sequence 1 [Source:ZFIN;Acc:ZDB-GENE-040426-957]
12. dcaf13 ENSDARG00000002267 2435 1.763 - 0.929 - - - - - - 0.834 ddb1 and cul4 associated factor 13 [Source:ZFIN;Acc:ZDB-GENE-040426-703]
13. galnt10 ENSDARG00000103825 320 1.759 0.810 0.949 - - - - - - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10) [Source:ZFIN;Acc:ZDB-GENE-030131-595]
14. patl1 ENSDARG00000017423 2744 1.754 0.788 0.966 - - - - - - - protein associated with topoisomerase II homolog 1 (yeast) [Source:ZFIN;Acc:ZDB-GENE-070209-83]
15. fam222ba ENSDARG00000059886 1648 1.737 - 0.944 - - - - - - 0.793 family with sequence similarity 222, member Ba [Source:ZFIN;Acc:ZDB-GENE-060526-355]
16. atp6v1d ENSDARG00000011175 8331 1.702 - 0.899 - - - 0.803 - - - ATPase H+ transporting V1 subunit D [Source:ZFIN;Acc:ZDB-GENE-040426-727]
17. nrp1a ENSDARG00000102153 4154 1.701 - 0.934 - - - - - - 0.767 neuropilin 1a [Source:ZFIN;Acc:ZDB-GENE-030519-2]
18. ARHGAP35 2409 1.7 0.745 0.955 - - - - - - - Rho GTPase activating protein 35b, transcript variant X2
19. slc25a43 ENSDARG00000102048 489 1.699 - - - - - - 0.831 - 0.868 solute carrier family 25, member 43 [Source:ZFIN;Acc:ZDB-GENE-030616-69]
20. ranbp1 ENSDARG00000014817 3371 1.697 0.765 0.932 - - - - - - - RAN binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2548]
21. znf503 ENSDARG00000018492 5974 1.692 0.742 0.950 - - - - - - - zinc finger protein 503 [Source:ZFIN;Acc:ZDB-GENE-031113-5]
22. tpst1 ENSDARG00000073872 2490 1.689 - - - - - 0.813 - - 0.876 tyrosylprotein sulfotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-000210-10]
23. ctbp1 ENSDARG00000057007, ENSDARG00000115804 5795 1.688 0.761 0.927 - - - - - - - C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]
24. cpt1a cpt1a 674 1.687 0.765 0.922 - - - - - - -
25. fmnl2b ENSDARG00000075041 1744 1.686 0.737 0.949 - - - - - - - formin-like 2b [Source:ZFIN;Acc:ZDB-GENE-041111-182]
26. arid4a ENSDARG00000043873 4176 1.685 - 0.941 - - - - - - 0.744 AT rich interactive domain 4A (RBP1-like) [Source:ZFIN;Acc:ZDB-GENE-050809-105]
27. MAP4_1 MAP4_1 1153 1.682 - 0.950 - - - 0.732 - - -
28. CR678040.1 CR678040.1 117 1.672 - - - - 0.803 - - - 0.869
29. ghitm 1443 1.665 - 0.844 - - - - - - 0.821 growth hormone inducible transmembrane protein
30. nhp2 ENSDARG00000069422 9925 1.663 - 0.914 - - - 0.749 - - - NHP2 ribonucleoprotein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-533]
31. pdzrn3b ENSDARG00000073869 1566 1.663 - - - - - 0.788 - - 0.875 PDZ domain containing RING finger 3b [Source:ZFIN;Acc:ZDB-GENE-071022-4]
32. cwc25 ENSDARG00000003382 2134 1.66 0.827 - - - - - - - 0.833 CWC25 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-2817]
33. mkrn4 ENSDARG00000028295 2768 1.66 0.846 - - - - - 0.814 - - makorin, ring finger protein, 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5954]
34. pygb ENSDARG00000002021, ENSDARG00000116450 1304 1.653 - 0.949 - - - 0.704 - - - phosphorylase, glycogen; brain [Source:ZFIN;Acc:ZDB-GENE-040928-2]
35. pogza ENSDARG00000054778 1495 1.652 - 0.938 - - - - 0.714 - - pogo transposable element derived with ZNF domain a [Source:ZFIN;Acc:ZDB-GENE-040914-76]
36. ZBTB7B ENSDARG00000021891 843 1.651 - 0.939 - - - 0.712 - - - zinc finger and BTB domain containing 7B [Source:ZFIN;Acc:ZDB-GENE-040426-1134]
37. tom1l2 ENSDARG00000009217, ENSDARG00000111492 1639 1.648 - - - - - - 0.779 - 0.869 target of myb1 like 2 membrane trafficking protein [Source:ZFIN;Acc:ZDB-GENE-061013-3]
38. wfdc1 ENSDARG00000058003 850 1.643 0.826 - - - - - - - 0.817 WAP four-disulfide core domain 1 [Source:ZFIN;Acc:ZDB-GENE-070112-352]
39. vps13a ENSDARG00000039225 3151 1.639 - 0.916 - - - - 0.723 - - vacuolar protein sorting 13 homolog A (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030926-1]
40. rbm34 ENSDARG00000101877 1573 1.633 - - - - - - 0.742 - 0.891 RNA binding motif protein 34 [Source:ZFIN;Acc:ZDB-GENE-040718-77]
41. psmg1 ENSDARG00000040620 1359 1.626 0.780 - - - - - - - 0.846 proteasome (prosome, macropain) assembly chaperone 1 [Source:ZFIN;Acc:ZDB-GENE-040718-469]
42. anapc11 ENSDARG00000102531, ENSDARG00000116987 1769 1.62 0.744 - - - - - - - 0.876 APC11 anaphase promoting complex subunit 11 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-061013-383]
43. atp6v0a2b ENSDARG00000035565, ENSDARG00000113695 785 1.619 0.788 - - - - - - - 0.831 ATPase H+ transporting V0 subunit a2b [Source:ZFIN;Acc:ZDB-GENE-060526-4]
44. gpr143 ENSDARG00000034572 559 1.614 - - - - 0.748 - - - 0.866 G protein-coupled receptor 143 [Source:ZFIN;Acc:ZDB-GENE-040426-1476]
45. dvl3a ENSDARG00000015707 1132 1.612 - - - - - 0.801 - - 0.811 dishevelled segment polarity protein 3a [Source:ZFIN;Acc:ZDB-GENE-010319-1]
46. taz ENSDARG00000041421 985 1.607 - - - - - - 0.715 - 0.892 tafazzin [Source:ZFIN;Acc:ZDB-GENE-030131-684]
47. srpr 5148 1.6 - 0.745 - - - - - - 0.855 signal recognition particle receptor (docking protein)
48. anxa5b ENSDARG00000016470 2934 1.596 0.794 - - - - - - - 0.802 annexin A5b [Source:ZFIN;Acc:ZDB-GENE-030131-9076]
49. PARL 2511 1.579 - - - - - - 0.702 - 0.877 presenilin associated rhomboid like
50. RLIM ENSDARG00000079306 514 1.579 - - - - - - 0.710 - 0.869 ring finger protein, LIM domain interacting [Source:ZFIN;Acc:ZDB-GENE-120809-2]
51. thsd7ba ENSDARG00000095022 231 1.572 - - - - 0.715 - - - 0.857 thrombospondin, type I, domain containing 7Ba [Source:ZFIN;Acc:ZDB-GENE-070621-2]
52. tceb1a 969 1.563 0.765 - - - - - 0.798 - - transcription elongation factor B (SIII), polypeptide 1a, transcript variant X4
53. TSG101 TSG101 1686 1.56 0.844 - - - - 0.716 - - -
54. mrps18b ENSDARG00000007065 2121 1.558 - - - - - - 0.712 - 0.846 mitochondrial ribosomal protein S18B [Source:ZFIN;Acc:ZDB-GENE-050417-278]
55. dazap2 ENSDARG00000007867 1805 1.55 - - - - - 0.729 - - 0.821 DAZ associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3036]
56. sqstm1 ENSDARG00000075014 2392 1.545 0.730 0.815 - - - - - - - sequestosome 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2204]
57. exd3 ENSDARG00000063140 119 1.536 0.814 - - - - - 0.722 - - exonuclease 3'-5' domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-091204-349]
58. pknox1.2 ENSDARG00000036542 1503 1.534 0.801 - - - - - 0.733 - - pbx/knotted 1 homeobox 1.2 [Source:ZFIN;Acc:ZDB-GENE-020123-1]
59. mfsd11 ENSDARG00000102828 1043 1.528 - - - - 0.793 - 0.735 - - major facilitator superfamily domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-050913-140]
60. ago3b ENSDARG00000063079 1441 1.527 0.756 - - - - - 0.771 - - argonaute RISC catalytic component 3b [Source:ZFIN;Acc:ZDB-GENE-060503-452]
61. slit2 ENSDARG00000004246 5277 1.523 0.723 - - - - - - - 0.800 slit homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-010306-3]
62. polr2c ENSDARG00000033596, ENSDARG00000111144, ENSDARG00000113715 1388 1.52 - - - - - - 0.701 - 0.819 polymerase (RNA) II (DNA directed) polypeptide C [Source:ZFIN;Acc:ZDB-GENE-030131-6609]
63. thoc3 ENSDARG00000056517 909 1.519 0.818 - - - - - 0.701 - - THO complex 3 [Source:ZFIN;Acc:ZDB-GENE-040808-14]
64. BX539313.3 ENSDARG00000098016 638 1.509 0.803 - - - - 0.706 - - -
65. ppp1caa ENSDARG00000003486, ENSDARG00000115977 5931 1.509 0.756 - - - - - 0.753 - - protein phosphatase 1, catalytic subunit, alpha isozyme a [Source:ZFIN;Acc:ZDB-GENE-040516-3]
66. dsc2l ENSDARG00000039677 2747 1.509 0.780 - - - - - 0.729 - - desmocollin 2 like [Source:ZFIN;Acc:ZDB-GENE-031116-55]
67. PHLDB2 PHLDB2 1164 1.483 0.772 - - - - 0.711 - - -
68. nob1 ENSDARG00000016080 2483 1.475 0.719 - - - - - 0.756 - - NIN1 (RPN12) binding protein 1 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-3112]
69. arih2 ENSDARG00000012848 7087 1.467 - - - - - 0.756 0.711 - - ariadne homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-2158]
70. hgs ENSDARG00000020960 3574 1.465 - - - - - 0.723 - - 0.742 hepatocyte growth factor-regulated tyrosine kinase substrate [Source:ZFIN;Acc:ZDB-GENE-030131-6107]
71. pcbd1 ENSDARG00000031981 3373 1.451 - - - - - 0.712 - - 0.739 pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha [Source:ZFIN;Acc:ZDB-GENE-040426-1787]
72. rps27.2_1 ENSDARG00000055475 2786 1.439 - - - - - 0.716 0.723 - - ribosomal protein S27, isoform 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1735]
73. BX571715.2 BX571715.2 1316 1.425 0.722 - - - - - 0.703 - -
74. csnk1da ENSDARG00000008370 3469 0.982 - 0.982 - - - - - - - casein kinase 1, delta a [Source:ZFIN;Acc:ZDB-GENE-030131-825]
75. mxd3 ENSDARG00000098350 3040 0.98 - 0.980 - - - - - - - MAX dimerization protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1588]
76. c1galt1c1 ENSDARG00000036335 1623 0.975 - 0.975 - - - - - - - C1GALT1-specific chaperone 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2772]
77. selt1a 9746 0.974 - 0.974 - - - - - - - selenoprotein T, 1a
78. ppp1r13ba ENSDARG00000004377 1353 0.972 - 0.972 - - - - - - - protein phosphatase 1, regulatory subunit 13Ba [Source:ZFIN;Acc:ZDB-GENE-030131-9805]
79. nusap1 ENSDARG00000002403 6953 0.972 - 0.972 - - - - - - - nucleolar and spindle associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030827-5]
80. pafah1b1b ENSDARG00000026595 1822 0.971 - 0.971 - - - - - - - platelet-activating factor acetylhydrolase 1b, regulatory subunit 1b [Source:ZFIN;Acc:ZDB-GENE-040116-3]
81. CABZ01041962.1 ENSDARG00000076082 690 0.969 - 0.969 - - - - - - - uncharacterized LOC798124 [Source:NCBI gene;Acc:798124]
82. nup62l ENSDARG00000020527, ENSDARG00000111836, ENSDARG00000112620 3763 0.969 - 0.969 - - - - - - - nucleoporin 62 like [Source:ZFIN;Acc:ZDB-GENE-030131-8491]
83. igf2r ENSDARG00000006094 1578 0.968 - 0.968 - - - - - - - insulin-like growth factor 2 receptor [Source:ZFIN;Acc:ZDB-GENE-041014-300]
84. eif2ak3 ENSDARG00000062139 3276 0.966 - 0.966 - - - - - - - eukaryotic translation initiation factor 2-alpha kinase 3 [Source:ZFIN;Acc:ZDB-GENE-050414-2]
85. zgc:101663 ENSDARG00000037852 830 0.965 - 0.965 - - - - - - - zgc:101663 [Source:ZFIN;Acc:ZDB-GENE-041114-149]
86. sel1l ENSDARG00000004581 2246 0.963 - 0.963 - - - - - - - SEL1L, ERAD E3 ligase adaptor subunit [Source:ZFIN;Acc:ZDB-GENE-041001-122]
87. BTBD2 BTBD2 610 0.963 - 0.963 - - - - - - -
88. nfe2l2a ENSDARG00000042824 1707 0.963 - 0.963 - - - - - - - nuclear factor, erythroid 2-like 2a [Source:ZFIN;Acc:ZDB-GENE-030723-2]
89. itgav ENSDARG00000006314 4277 0.963 - 0.963 - - - - - - - integrin, alpha V [Source:ZFIN;Acc:ZDB-GENE-060616-382]
90. si:dkey-239h2.3 ENSDARG00000092033 398 0.962 - 0.962 - - - - - - - si:dkey-239h2.3 [Source:ZFIN;Acc:ZDB-GENE-081104-383]
91. ABI3_1 ABI3_1 511 0.962 - 0.962 - - - - - - -
92. zgc:101559 ENSDARG00000003257, ENSDARG00000112139, ENSDARG00000112819, ENSDARG00000115491 751 0.962 - 0.962 - - - - - - - zgc:101559 [Source:ZFIN;Acc:ZDB-GENE-041114-122]
93. tyw1 ENSDARG00000062987 1759 0.961 - 0.961 - - - - - - - tRNA-yW synthesizing protein 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060929-688]
94. C2H1orf123 C2H1orf123 2344 0.961 - 0.961 - - - - - - -
95. gnptab ENSDARG00000030153 559 0.961 - 0.961 - - - - - - - N-acetylglucosamine-1-phosphate transferase subunits alpha and beta [Source:ZFIN;Acc:ZDB-GENE-030131-4714]
96. fbxw11b ENSDARG00000017230, ENSDARG00000112841 2593 0.96 - 0.960 - - - - - - - F-box and WD repeat domain containing 11b [Source:ZFIN;Acc:ZDB-GENE-040426-2903]
97. FBXW12 FBXW12 658 0.959 - 0.959 - - - - - - -
98. taf1a ENSDARG00000052471 252 0.959 - 0.959 - - - - - - - TATA box binding protein (TBP)-associated factor, RNA polymerase I, A [Source:ZFIN;Acc:ZDB-GENE-041014-272]
99. MGST1 MGST1 1958 0.959 - 0.959 - - - - - - -
100. f10 ENSDARG00000088581 4968 0.959 - 0.959 - - - - - - - coagulation factor X [Source:ZFIN;Acc:ZDB-GENE-021206-9]

There are 1422 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA