Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:rp71-45k5.4

Gene Name Gene ID Reads Annotation
si:rp71-45k5.4 ENSDARG00000035679 10411 si:rp71-45k5.4 [Source:ZFIN;Acc:ZDB-GENE-060503-941]










Genes with expression patterns similar to si:rp71-45k5.4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:rp71-45k5.4 ENSDARG00000035679 10411 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:rp71-45k5.4 [Source:ZFIN;Acc:ZDB-GENE-060503-941]
2. fubp1 ENSDARG00000029248 15259 3.57 - 0.937 0.935 - - - 0.994 - 0.704 far upstream element (FUSE) binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2159]
3. abcf1 ENSDARG00000031795 8635 2.302 - 0.870 - - - 0.719 - 0.713 - ATP-binding cassette, sub-family F (GCN20), member 1 [Source:ZFIN;Acc:ZDB-GENE-050517-31]
4. ccdc25 ENSDARG00000021753 3837 1.972 - - 0.994 0.978 - - - - - coiled-coil domain containing 25 [Source:ZFIN;Acc:ZDB-GENE-040426-1389]
5. si:ch211-152p11.4 ENSDARG00000079705 2341 1.969 - - 0.996 0.973 - - - - - si:ch211-152p11.4 [Source:ZFIN;Acc:ZDB-GENE-060503-764]
6. meis1 meis1 6937 1.965 - - - 0.970 - - 0.995 - -
7. arf6b ENSDARG00000052928 4585 1.952 - - - 0.958 - - 0.994 - - ADP-ribosylation factor 6b [Source:ZFIN;Acc:ZDB-GENE-030131-9056]
8. ndufb4 ENSDARG00000019332, ENSDARG00000110786, ENSDARG00000113951 11340 1.943 - - - 0.946 - - 0.997 - - NADH:ubiquinone oxidoreductase subunit B4 [Source:ZFIN;Acc:ZDB-GENE-040426-1973]
9. dynll1 ENSDARG00000058454 33932 1.932 - - - 0.969 - - 0.963 - - dynein, light chain, LC8-type 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1961]
10. chmp2bb ENSDARG00000002190 4629 1.931 - 0.958 - 0.973 - - - - - charged multivesicular body protein 2Bb [Source:ZFIN;Acc:ZDB-GENE-040426-2539]
11. atp6v0d1 ENSDARG00000069090, ENSDARG00000115876 4797 1.93 - 0.939 - - - - 0.991 - - ATPase H+ transporting V0 subunit d1 [Source:ZFIN;Acc:ZDB-GENE-030131-1531]
12. hrsp12 3981 1.926 - - - 0.963 - - 0.963 - - heat-responsive protein 12, transcript variant 1
13. cdca7a ENSDARG00000077620 9345 1.923 - 0.943 0.980 - - - - - - cell division cycle associated 7a [Source:ZFIN;Acc:ZDB-GENE-050417-29]
14. sdhdb ENSDARG00000030139 9761 1.907 - 0.941 - 0.966 - - - - - succinate dehydrogenase complex, subunit D, integral membrane protein b [Source:ZFIN;Acc:ZDB-GENE-040822-17]
15. anapc16 ENSDARG00000013822 5857 1.891 - 0.939 - 0.952 - - - - - anaphase promoting complex subunit 16 [Source:ZFIN;Acc:ZDB-GENE-050417-430]
16. si:dkeyp-113d7.4 si:dkeyp-113d7.4 33767 1.868 - - 0.981 0.887 - - - - -
17. cdkn1c cdkn1c 17427 1.866 - 0.890 - 0.976 - - - - -
18. anxa1c ENSDARG00000104359 23181 1.855 - - - 0.906 - - 0.949 - - annexin A1c [Source:ZFIN;Acc:ZDB-GENE-030131-5274]
19. cd164 ENSDARG00000013628 21750 1.851 - - - 0.906 - - 0.945 - - CD164 molecule, sialomucin [Source:ZFIN;Acc:ZDB-GENE-030131-1598]
20. rps27.2 ENSDARG00000055475 51081 1.848 - - - 0.900 - - 0.948 - - ribosomal protein S27, isoform 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1735]
21. aldh4a1 ENSDARG00000038207 4639 1.836 - 0.865 - 0.971 - - - - - aldehyde dehydrogenase 4 family, member A1 [Source:ZFIN;Acc:ZDB-GENE-040426-1179]
22. sub1a ENSDARG00000053446 13383 1.808 - - - - - 0.814 0.994 - - SUB1 homolog, transcriptional regulator a [Source:ZFIN;Acc:ZDB-GENE-050522-151]
23. DUSP28 ENSDARG00000059695 1135 1.747 - - - 0.971 - 0.776 - - - dual specificity phosphatase 28 [Source:ZFIN;Acc:ZDB-GENE-131127-257]
24. TIFA TIFA 1519 1.741 - 0.934 - - - 0.807 - - -
25. trappc4 ENSDARG00000027418 1491 1.74 - 0.911 - - - 0.829 - - - trafficking protein particle complex 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1734]
26. cct3 ENSDARG00000016173 15869 1.739 - 0.833 - 0.906 - - - - - chaperonin containing TCP1, subunit 3 (gamma) [Source:ZFIN;Acc:ZDB-GENE-020419-5]
27. pcca ENSDARG00000028982, ENSDARG00000110281 3212 1.736 - - - 0.972 - 0.764 - - - propionyl-CoA carboxylase subunit alpha [Source:ZFIN;Acc:ZDB-GENE-040718-246]
28. snrpf ENSDARG00000105037 10241 1.736 - - 0.977 - - 0.759 - - - small nuclear ribonucleoprotein polypeptide F [Source:ZFIN;Acc:ZDB-GENE-040930-9]
29. prelid1a ENSDARG00000098671 4745 1.721 - - - 0.970 - 0.751 - - - PRELI domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1341]
30. puf60b ENSDARG00000001241 13827 1.707 - - 0.966 - - 0.741 - - - poly-U binding splicing factor b [Source:ZFIN;Acc:ZDB-GENE-040625-116]
31. eif3s6ip ENSDARG00000101082 18515 1.697 - 0.706 - - - - 0.991 - - eukaryotic translation initiation factor 3, subunit 6 interacting protein [Source:ZFIN;Acc:ZDB-GENE-040426-2138]
32. rab22a ENSDARG00000015807, ENSDARG00000114826 1627 1.677 - - - 0.967 - 0.710 - - - RAB22A, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-041114-161]
33. hspd1 ENSDARG00000056160 13690 1.671 - - - 0.926 - - - - 0.745 heat shock 60 protein 1 [Source:ZFIN;Acc:ZDB-GENE-021206-1]
34. SLC12A6 SLC12A6 883 1.667 - 0.930 - - - 0.737 - - -
35. CABZ01103862.1 ENSDARG00000109235 3223 1.66 - 0.927 - - - - - - 0.733
36. snrpd2 ENSDARG00000040440, ENSDARG00000110285 4301 1.66 - 0.954 - - - 0.706 - - - small nuclear ribonucleoprotein D2 polypeptide [Source:ZFIN;Acc:ZDB-GENE-040914-10]
37. rbm4.3 ENSDARG00000022129 28571 1.649 - - - - - 0.704 0.945 - - RNA binding motif protein 4.3 [Source:ZFIN;Acc:ZDB-GENE-040426-1938]
38. akirin2 ENSDARG00000058729 13245 1.641 - 0.937 - - - - - - 0.704 akirin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2944]
39. eif3ea ENSDARG00000090697 14670 1.63 - 0.804 - - - - - - 0.826 eukaryotic translation initiation factor 3, subunit E, a [Source:ZFIN;Acc:ZDB-GENE-030131-3827]
40. calr ENSDARG00000076290 13987 1.625 - - 0.908 - - - - - 0.717 calreticulin [Source:ZFIN;Acc:ZDB-GENE-030131-4042]
41. hnrnpab hnrnpab 72354 1.61 - - 0.771 - - - 0.839 - -
42. psmd11b ENSDARG00000005134 4242 1.608 - - - - - 0.765 - - 0.843 proteasome 26S subunit, non-ATPase 11b [Source:ZFIN;Acc:ZDB-GENE-030131-984]
43. lzts2a ENSDARG00000074597, ENSDARG00000113794 7477 1.576 - - - - - 0.798 - - 0.778 leucine zipper, putative tumor suppressor 2a [Source:ZFIN;Acc:ZDB-GENE-090313-276]
44. histh1l ENSDARG00000035519 12293 1.503 - 0.708 - - - 0.795 - - - histone H1 like [Source:ZFIN;Acc:ZDB-GENE-050417-145]
45. chchd2 ENSDARG00000059304, ENSDARG00000112202 7438 1.496 - - - - - 0.730 - - 0.766 coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1737]
46. rpl22l1 ENSDARG00000010244 36262 1.496 - - - 0.765 - 0.731 - - - ribosomal protein L22-like 1 [Source:ZFIN;Acc:ZDB-GENE-060804-3]
47. usp9 ENSDARG00000013708 9057 1.486 - - - - - 0.754 - - 0.732 ubiquitin specific peptidase 9 [Source:ZFIN;Acc:ZDB-GENE-061019-1]
48. gdpd3a ENSDARG00000074466 1739 1.482 - 0.762 - - - - - - 0.720 glycerophosphodiester phosphodiesterase domain containing 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2279]
49. rpl15 ENSDARG00000009285 81944 1.46 - - 0.753 - - - 0.707 - - ribosomal protein L15 [Source:ZFIN;Acc:ZDB-GENE-040801-183]
50. snrpe ENSDARG00000033175 7462 1.459 - - - - - 0.726 - 0.733 - small nuclear ribonucleoprotein polypeptide E [Source:ZFIN;Acc:ZDB-GENE-040426-1112]
51. eif3ha ENSDARG00000102452 9238 1.427 - - - - 0.716 0.711 - - - eukaryotic translation initiation factor 3, subunit H, a [Source:ZFIN;Acc:ZDB-GENE-040808-19]
52. timm13 ENSDARG00000058297 4447 0.997 - - - - - - 0.997 - - translocase of inner mitochondrial membrane 13 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-167]
53. zranb2 ENSDARG00000044332 6723 0.997 - - - - - - 0.997 - - zinc finger, RAN-binding domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2743]
54. grpel2 ENSDARG00000069421 5673 0.997 - - - - - - 0.997 - - GrpE-like 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-091204-188]
55. snrnp27 ENSDARG00000035625 9080 0.996 - - - - - - 0.996 - - small nuclear ribonucleoprotein 27 (U4/U6.U5) [Source:ZFIN;Acc:ZDB-GENE-040718-457]
56. CU695232.1 ENSDARG00000098286 1266 0.996 - - 0.996 - - - - - - zinc transporter ZIP9-B-like [Source:NCBI gene;Acc:571446]
57. ppa1b ENSDARG00000030441 9027 0.996 - - - - - - 0.996 - - pyrophosphatase (inorganic) 1b [Source:ZFIN;Acc:ZDB-GENE-050417-375]
58. prkag3b ENSDARG00000000369 1945 0.996 - - 0.996 - - - - - - protein kinase, AMP-activated, gamma 3b non-catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-060421-6938]
59. elmo1 ENSDARG00000098753 6966 0.996 - - - - - - 0.996 - - engulfment and cell motility 1 (ced-12 homolog, C. elegans) [Source:ZFIN;Acc:ZDB-GENE-040426-2069]
60. mapre1b ENSDARG00000002659 9119 0.996 - - - - - - 0.996 - - microtubule-associated protein, RP/EB family, member 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2256]
61. ddah2 ENSDARG00000105009 4570 0.996 - - 0.996 - - - - - - dimethylarginine dimethylaminohydrolase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-913]
62. igf2bp2a ENSDARG00000003421 2810 0.996 - - 0.996 - - - - - - insulin-like growth factor 2 mRNA binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-070912-44]
63. CT485993.2 CT485993.2 1419 0.996 - - 0.996 - - - - - -
64. CPAMD8 ENSDARG00000056530 3481 0.996 - - 0.996 - - - - - - C3 and PZP-like, alpha-2-macroglobulin domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-050208-428]
65. C13H10orf11 1209 0.996 - - 0.996 - - - - - - c13h10orf11 homolog (H. sapiens), transcript variant X2
66. psmd11a ENSDARG00000060150 4529 0.996 - - 0.996 - - - - - - proteasome 26S subunit, non-ATPase 11a [Source:ZFIN;Acc:ZDB-GENE-030131-2711]
67. TNRC6C_1 TNRC6C_1 6574 0.996 - - - - - - 0.996 - -
68. rcc2 ENSDARG00000011510, ENSDARG00000115981 7997 0.996 - - - - - - 0.996 - - regulator of chromosome condensation 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2213]
69. mtor ENSDARG00000053196 2156 0.996 - - 0.996 - - - - - - mechanistic target of rapamycin kinase [Source:ZFIN;Acc:ZDB-GENE-030131-2974]
70. tbcela ENSDARG00000002682 1179 0.996 - - 0.996 - - - - - - tubulin folding cofactor E-like a [Source:ZFIN;Acc:ZDB-GENE-040426-1719]
71. CAMK2G CAMK2G 3537 0.996 - - - - - - 0.996 - -
72. vapal ENSDARG00000115862 3108 0.996 - - 0.996 - - - - - - VAMP (vesicle-associated membrane protein)-associated protein A, like [Source:ZFIN;Acc:ZDB-GENE-040718-281]
73. btbd2 btbd2 1296 0.996 - - 0.996 - - - - - -
74. LYRM7 ENSDARG00000079815, ENSDARG00000111617, ENSDARG00000114632 2283 0.996 - - 0.996 - - - - - - LYR motif containing 7 [Source:ZFIN;Acc:ZDB-GENE-070615-32]
75. lsm12a ENSDARG00000028848, ENSDARG00000115800 3499 0.996 - - 0.996 - - - - - - LSM12 homolog a [Source:ZFIN;Acc:ZDB-GENE-040516-12]
76. dusp11 ENSDARG00000038156 2490 0.996 - - 0.996 - - - - - - dual specificity phosphatase 11 (RNA/RNP complex 1-interacting) [Source:ZFIN;Acc:ZDB-GENE-050417-226]
77. ITFG3 ITFG3 1803 0.996 - - 0.996 - - - - - -
78. sdad1 ENSDARG00000105117 2819 0.996 - - 0.996 - - - - - - SDA1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-021213-1]
79. ACTN4_1 ACTN4_1 8550 0.995 - - 0.995 - - - - - -
80. gys1 ENSDARG00000016875 2037 0.995 - - - - - - 0.995 - - glycogen synthase 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-040426-1243]
81. mknk2b ENSDARG00000015164 2158 0.995 - - 0.995 - - - - - - MAP kinase interacting serine/threonine kinase 2b [Source:ZFIN;Acc:ZDB-GENE-030829-2]
82. mapk6 ENSDARG00000032103 6422 0.995 - - - - - - 0.995 - - mitogen-activated protein kinase 6 [Source:ZFIN;Acc:ZDB-GENE-050420-7]
83. xpo4 ENSDARG00000010281, ENSDARG00000109463 2010 0.995 - - - - - - 0.995 - - exportin 4 [Source:ZFIN;Acc:ZDB-GENE-030131-3062]
84. cd276 ENSDARG00000003061 2798 0.995 - - - - - - 0.995 - - CD276 molecule [Source:ZFIN;Acc:ZDB-GENE-070112-452]
85. hoxb3a ENSDARG00000029263 5493 0.995 - - - - - - 0.995 - - homeobox B3a [Source:ZFIN;Acc:ZDB-GENE-990415-104]
86. slit3 ENSDARG00000034268, ENSDARG00000111488, ENSDARG00000115194 3999 0.995 - - - - - - 0.995 - - slit homolog 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-010306-4]
87. pfkma ENSDARG00000014179 1293 0.995 - - - - - - 0.995 - - phosphofructokinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-040912-135]
88. tob1b ENSDARG00000021372 7048 0.995 - - - - - - 0.995 - - transducer of ERBB2, 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2151]
89. h1fx ENSDARG00000054058 4075 0.995 - - - - - - 0.995 - - H1 histone family, member X [Source:ZFIN;Acc:ZDB-GENE-030131-1228]
90. snrpa1 ENSDARG00000024651 3306 0.995 - - 0.995 - - - - - - small nuclear ribonucleoprotein polypeptide A' [Source:ZFIN;Acc:ZDB-GENE-041114-82]
91. cct5 ENSDARG00000045399 11572 0.995 - - - - - - 0.995 - - chaperonin containing TCP1, subunit 5 (epsilon) [Source:ZFIN;Acc:ZDB-GENE-030131-977]
92. si:dkey-256i11.1 si:dkey-256i11.1 3373 0.995 - - - - - - 0.995 - -
93. nfil3-5 ENSDARG00000094965, ENSDARG00000113345 4657 0.995 - - - - - - 0.995 - - nuclear factor, interleukin 3 regulated, member 5 [Source:ZFIN;Acc:ZDB-GENE-030131-7677]
94. ctdsp1 ENSDARG00000040674 2828 0.995 - - - - - - 0.995 - - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-050522-523]
95. GPANK1 ENSDARG00000053995 1535 0.995 - - - - - - 0.995 - - G patch domain and ankyrin repeats 1 [Source:ZFIN;Acc:ZDB-GENE-070928-32]
96. AKAP2 AKAP2 4178 0.995 - - 0.995 - - - - - -
97. fbl ENSDARG00000053912 5891 0.994 - - - - - - 0.994 - - fibrillarin [Source:ZFIN;Acc:ZDB-GENE-040426-1936]
98. med6 ENSDARG00000034734 2711 0.994 - - - - - - 0.994 - - mediator complex subunit 6 [Source:ZFIN;Acc:ZDB-GENE-040625-61]
99. ARHGAP35 2409 0.994 - - - - - - 0.994 - - Rho GTPase activating protein 35b, transcript variant X2
100. rbms1a ENSDARG00000074023 2742 0.994 - - - - - - 0.994 - - RNA binding motif, single stranded interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4967]

There are 822 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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