Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:rp71-36a1.3

Gene Name Gene ID Reads Annotation
si:rp71-36a1.3 ENSDARG00000071662 2 si:rp71-36a1.3 [Source:ZFIN;Acc:ZDB-GENE-050208-566]










Genes with expression patterns similar to si:rp71-36a1.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:rp71-36a1.3 ENSDARG00000071662 2 3 - 1.000 1.000 - - - - 1.000 - si:rp71-36a1.3 [Source:ZFIN;Acc:ZDB-GENE-050208-566]
2. ODF2 ODF2 6 1.893 - 1.000 - - - - - 0.893 -
3. atp2b2 ENSDARG00000044902, ENSDARG00000063433 140 1.882 - 1.000 0.882 - - - - - - ATPase plasma membrane Ca2+ transporting 2 [Source:ZFIN;Acc:ZDB-GENE-061016-1]
4. si:ch73-92e20.2 si:ch73-92e20.2 2 1.78 - 1.000 0.780 - - - - - -
5. itih6 ENSDARG00000056037 3 1.78 - 1.000 0.780 - - - - - - inter-alpha-trypsin inhibitor heavy chain family, member 6 [Source:ZFIN;Acc:ZDB-GENE-050603-1]
6. GABRA3 ENSDARG00000090883 5 1.78 - 1.000 0.780 - - - - - - gamma-aminobutyric acid (GABA) A receptor, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-091204-365]
7. LRFN4_1 LRFN4_1 5 1.78 - 1.000 0.780 - - - - - -
8. csf2rb ENSDARG00000076586, ENSDARG00000112627, ENSDARG00000114668 9 1.78 - 1.000 0.780 - - - - - - colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage) [Source:ZFIN;Acc:ZDB-GENE-080115-1]
9. ca10b ENSDARG00000009568 8 1.769 - 1.000 0.769 - - - - - - carbonic anhydrase Xb [Source:ZFIN;Acc:ZDB-GENE-080815-2]
10. CABZ01007222.1 CABZ01007222.1 78 1.715 - 1.000 0.715 - - - - - -
11. znf512 ENSDARG00000041910 20 1.523 - 0.770 - - - - - 0.753 - zinc finger protein 512 [Source:ZFIN;Acc:ZDB-GENE-041014-346]
12. si:dkey-193c22.1 ENSDARG00000093687 104 1 - 1.000 - - - - - - - si:dkey-193c22.1 [Source:ZFIN;Acc:ZDB-GENE-030131-7957]
13. gad1b ENSDARG00000027419 440 1 - 1.000 - - - - - - - glutamate decarboxylase 1b [Source:ZFIN;Acc:ZDB-GENE-030909-3]
14. CABZ01021538.1 CABZ01021538.1 67 1 - 1.000 - - - - - - -
15. CCDC66 2 1 - 1.000 - - - - - - - coiled-coil domain containing 66
16. slc1a9 ENSDARG00000098269 12 1 - 1.000 - - - - - - - solute carrier family 1 (glutamate transporter), member 9 [Source:ZFIN;Acc:ZDB-GENE-101111-9]
17. slc25a29 ENSDARG00000057352 9 1 - 1.000 - - - - - - - solute carrier family 25 (mitochondrial carnitine/acylcarnitine carrier), member 29 [Source:ZFIN;Acc:ZDB-GENE-050913-70]
18. si:dkey-71b5.6 ENSDARG00000098861 12 1 - 1.000 - - - - - - - si:dkey-71b5.6 [Source:NCBI gene;Acc:100294632]
19. zgc:172218 ENSDARG00000089869, ENSDARG00000110419 3 1 - - - - - - - 1.000 - zgc:172218 [Source:NCBI gene;Acc:793798]
20. ptpn6 ENSDARG00000089043 168 1 - 1.000 - - - - - - - protein tyrosine phosphatase, non-receptor type 6 [Source:ZFIN;Acc:ZDB-GENE-030131-7513]
21. GADD45G_1 GADD45G_1 236 1 - 1.000 - - - - - - -
22. si:ch211-188i4.4 5 1 - 1.000 - - - - - - - si:ch211-188i4.4, transcript variant X3
23. LRRK1_1 LRRK1_1 11 1 - 1.000 - - - - - - -
24. adam10b ENSDARG00000015502 26 1 - 1.000 - - - - - - - ADAM metallopeptidase domain 10b [Source:ZFIN;Acc:ZDB-GENE-071115-1]
25. BX005294.2 ENSDARG00000109361 3 1 - 1.000 - - - - - - -
26. baiap2l1a ENSDARG00000029305 30 1 - - - - - - - 1.000 - BAI1-associated protein 2-like 1a [Source:ZFIN;Acc:ZDB-GENE-031201-1]
27. zgc:174224_1 ENSDARG00000093875 7 1 - 1.000 - - - - - - - zgc:174224 [Source:ZFIN;Acc:ZDB-GENE-071004-118]
28. nid2b ENSDARG00000009471 4 1 - 1.000 - - - - - - - nidogen 2b (osteonidogen) [Source:ZFIN;Acc:ZDB-GENE-040724-143]
29. CABZ01068324.1 CABZ01068324.1 4 1 - 1.000 - - - - - - -
30. zgc:165627 zgc:165627 4 1 - 1.000 - - - - - - -
31. CT027800.1 CT027800.1 36 1 - 1.000 - - - - - - -
32. zgc:173593 ENSDARG00000077360 10 1 - 1.000 - - - - - - - zgc:173593 [Source:ZFIN;Acc:ZDB-GENE-071004-57]
33. amy2a ENSDARG00000013856 13 1 - 1.000 - - - - - - - amylase, alpha 2A (pancreatic) [Source:ZFIN;Acc:ZDB-GENE-040426-2393]
34. FAM117B FAM117B 225 1 - 1.000 - - - - - - -
35. prl ENSDARG00000037946 80 1 - 1.000 - - - - - - - prolactin [Source:ZFIN;Acc:ZDB-GENE-030513-1]
36. FP236851.1 FP236851.1 10 1 - 1.000 - - - - - - -
37. FAXC FAXC 102 1 - 1.000 - - - - - - -
38. si:dkeyp-66a7.1 si:dkeyp-66a7.1 6 1 - 1.000 - - - - - - -
39. MFAP4_3 MFAP4_3 7 1 - 1.000 - - - - - - -
40. thbs2a ENSDARG00000060410 0 1 - 1.000 - - - - - - - thrombospondin 2a [Source:ZFIN;Acc:ZDB-GENE-020708-2]
41. si:dkey-165b20.3 ENSDARG00000099544 6 1 - 1.000 - - - - - - - si:dkey-165b20.3 [Source:ZFIN;Acc:ZDB-GENE-110913-172]
42. SNORD59 SNORD59 7 1 - 1.000 - - - - - - -
43. MCMDC2 0 1 - 1.000 - - - - - - - minichromosome maintenance domain containing 2, transcript variant X2
44. cyp27a7 ENSDARG00000033802 216 1 - 1.000 - - - - - - - cytochrome P450, family 27, subfamily A, polypeptide 7 [Source:ZFIN;Acc:ZDB-GENE-081104-519]
45. ifnphi1 ENSDARG00000025607 6 1 - 1.000 - - - - - - - interferon phi 1 [Source:ZFIN;Acc:ZDB-GENE-030721-3]
46. CU467888.1 CU467888.1 30 1 - 1.000 - - - - - - -
47. si:dkey-188p4.1 si:dkey-188p4.1 1 1 - 1.000 - - - - - - -
48. si:ch211-198c19.2 si:ch211-198c19.2 165 1 - 1.000 - - - - - - -
49. lrrc3b ENSDARG00000063215 0 1 - 1.000 - - - - - - - leucine rich repeat containing 3B [Source:ZFIN;Acc:ZDB-GENE-070410-55]
50. PCDH10 PCDH10 7 1 - 1.000 - - - - - - -
51. fam43b ENSDARG00000070222 92 1 - 1.000 - - - - - - - family with sequence similarity 43, member B [Source:ZFIN;Acc:ZDB-GENE-040912-11]
52. tbc1d20 ENSDARG00000032298 1 1 - 1.000 - - - - - - - TBC1 domain family, member 20 [Source:ZFIN;Acc:ZDB-GENE-050626-61]
53. si:dkey-199m13.8 si:dkey-199m13.8 61 1 - 1.000 - - - - - - -
54. grin2bb ENSDARG00000030376 60 1 - 1.000 - - - - - - - glutamate receptor, ionotropic, N-methyl D-aspartate 2B, genome duplicate b [Source:ZFIN;Acc:ZDB-GENE-061207-27]
55. RPGRIP1 ENSDARG00000076055 10 1 - 1.000 - - - - - - - RPGR interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-091204-394]
56. SAMHD1 ENSDARG00000071288 0 1 - 1.000 - - - - - - - SAM domain and HD domain 1 [Source:ZFIN;Acc:ZDB-GENE-090313-386]
57. HYKK_1 HYKK_1 4 1 - 1.000 - - - - - - -
58. tmem199 ENSDARG00000069314, ENSDARG00000112510 36 1 - 1.000 - - - - - - - transmembrane protein 199 [Source:ZFIN;Acc:ZDB-GENE-050522-150]
59. ITPRIPL2 88 1 - 1.000 - - - - - - - inositol 1,4,5-trisphosphate receptor interacting protein like 2
60. kcnh1a ENSDARG00000024167 9 1 - 1.000 - - - - - - - potassium voltage-gated channel, subfamily H (eag-related), member 1a [Source:ZFIN;Acc:ZDB-GENE-061226-1]
61. UHRF2_1 UHRF2_1 2 1 - 1.000 - - - - - - -
62. foxb1b ENSDARG00000053650, ENSDARG00000110408, ENSDARG00000113373 51 1 - 1.000 - - - - - - - forkhead box B1b [Source:ZFIN;Acc:ZDB-GENE-990415-77]
63. cdk5r1a ENSDARG00000037916 46 1 - 1.000 - - - - - - - cyclin-dependent kinase 5, regulatory subunit 1a (p35) [Source:ZFIN;Acc:ZDB-GENE-080723-17]
64. fgfr1bl ENSDARG00000075027, ENSDARG00000104015 2 1 - - - - - - - 1.000 - fibroblast growth factor receptor 1b, like [Source:ZFIN;Acc:ZDB-GENE-091204-406]
65. tgm2b ENSDARG00000074094 1 1 - 1.000 - - - - - - - transglutaminase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-2576]
66. cacng2a ENSDARG00000032565 99 1 - 1.000 - - - - - - - calcium channel, voltage-dependent, gamma subunit 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1401]
67. im:7141269 ENSDARG00000101756 30 1 - 1.000 - - - - - - - im:7141269 [Source:ZFIN;Acc:ZDB-GENE-041111-134]
68. CABZ01057951.1 CABZ01057951.1 10 1 - 1.000 - - - - - - -
69. pcdh1g18 ENSDARG00000099447 7 1 - 1.000 - - - - - - - protocadherin 1 gamma 18 [Source:ZFIN;Acc:ZDB-GENE-050609-13]
70. gpr61 ENSDARG00000055570 128 1 - 1.000 - - - - - - - G protein-coupled receptor 61 [Source:ZFIN;Acc:ZDB-GENE-081104-239]
71. sytl4 ENSDARG00000102433 19 1 - 1.000 - - - - - - - synaptotagmin-like 4 [Source:ZFIN;Acc:ZDB-GENE-070209-217]
72. LRFN4 LRFN4 59 1 - 1.000 - - - - - - -
73. BX569789.4 BX569789.4 3 1 - 1.000 - - - - - - -
74. lrrc18b ENSDARG00000076236 5 1 - 1.000 - - - - - - - leucine rich repeat containing 18b [Source:ZFIN;Acc:ZDB-GENE-110315-1]
75. CMA1_3 CMA1_3 0 1 - 1.000 - - - - - - -
76. si:ch211-154o6.3_1 ENSDARG00000099846, ENSDARG00000112144 10 1 - 1.000 - - - - - - - si:ch211-154o6.3 [Source:ZFIN;Acc:ZDB-GENE-030131-1030]
77. si:dkey-24p1.7 ENSDARG00000089404 7 1 - 1.000 - - - - - - - si:dkey-24p1.7 [Source:ZFIN;Acc:ZDB-GENE-121214-215]
78. si:dkeyp-10a3.2 18 1 - 1.000 - - - - - - - si:dkeyp-10a3.2
79. mcm5_1 ENSDARG00000019507 10 1 - 1.000 - - - - - - - minichromosome maintenance complex component 5 [Source:ZFIN;Acc:ZDB-GENE-021209-1]
80. TMEM57 TMEM57 260 1 - 1.000 - - - - - - -
81. neu3.1 ENSDARG00000096382 9 1 - 1.000 - - - - - - - sialidase 3 (membrane sialidase), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-061201-39]
82. tuba7l ENSDARG00000104643 33 1 - - - - - - - 1.000 - tubulin, alpha 7 like [Source:ZFIN;Acc:ZDB-GENE-040704-78]
83. gpc2 ENSDARG00000104217 10 1 - 1.000 - - - - - - - glypican 2 [Source:ZFIN;Acc:ZDB-GENE-050302-31]
84. ZNF337_11 ZNF337_11 11 1 - 1.000 - - - - - - -
85. U6_33 U6_33 0 1 - - - - - - - 1.000 -
86. neu3.5 ENSDARG00000096368 5 1 - 1.000 - - - - - - - sialidase 3 (membrane sialidase), tandem duplicate 5 [Source:ZFIN;Acc:ZDB-GENE-071220-2]
87. rgs8 ENSDARG00000070037, ENSDARG00000111478 37 1 - 1.000 - - - - - - - regulator of G protein signaling 8 [Source:ZFIN;Acc:ZDB-GENE-040718-264]
88. erap2 ENSDARG00000098618 16 1 - 1.000 - - - - - - - endoplasmic reticulum aminopeptidase 2 [Source:ZFIN;Acc:ZDB-GENE-080402-6]
89. itpr2 ENSDARG00000011909 3 1 - 1.000 - - - - - - - inositol 1,4,5-trisphosphate receptor, type 2 [Source:ZFIN;Acc:ZDB-GENE-050419-192]
90. ZNF135_2 ZNF135_2 27 1 - 1.000 - - - - - - -
91. si:dkey-85k15.4 ENSDARG00000095047 25 1 - 1.000 - - - - - - - si:dkey-85k15.4 [Source:ZFIN;Acc:ZDB-GENE-100922-242]
92. col8a1b ENSDARG00000003533 18 1 - 1.000 - - - - - - - collagen, type VIII, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-060503-140]
93. zgc:152968 ENSDARG00000037002 6 1 - 1.000 - - - - - - - zgc:152968 [Source:ZFIN;Acc:ZDB-GENE-061013-448]
94. arrb2a ENSDARG00000039215 5 1 - 1.000 - - - - - - - arrestin, beta 2a [Source:ZFIN;Acc:ZDB-GENE-030131-29]
95. klhl42 ENSDARG00000006011 46 1 - 1.000 - - - - - - - kelch-like family, member 42 [Source:ZFIN;Acc:ZDB-GENE-041210-190]
96. zgc:153615 ENSDARG00000038981 105 1 - 1.000 - - - - - - - zgc:153615 [Source:ZFIN;Acc:ZDB-GENE-061110-79]
97. si:dkey-273e13.2 si:dkey-273e13.2 0 1 - 1.000 - - - - - - -
98. U1_4 U1_4 0 1 - 1.000 - - - - - - -
99. nosip ENSDARG00000037958, ENSDARG00000112335 59 1 - 1.000 - - - - - - - nitric oxide synthase interacting protein [Source:ZFIN;Acc:ZDB-GENE-041114-146]
100. PTGR2 ENSDARG00000070673 43 1 - 1.000 - - - - - - - prostaglandin reductase 2 [Source:ZFIN;Acc:ZDB-GENE-050506-71]

There are 446 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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