Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:rp71-26b20.1

Gene Name Gene ID Reads Annotation
si:rp71-26b20.1 si:rp71-26b20.1 11










Genes with expression patterns similar to si:rp71-26b20.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:rp71-26b20.1 si:rp71-26b20.1 11 8 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000
2. spp1 ENSDARG00000044276 34 2.672 1.000 0.816 - - - 0.856 - - - secreted phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-050706-97]
3. si:ch211-260m19.8 si:ch211-260m19.8 33 2 1.000 - - - - 1.000 - - -
4. si:ch211-149b19.2 ENSDARG00000088882 28 1.955 1.000 0.955 - - - - - - - si:ch211-149b19.2 [Source:ZFIN;Acc:ZDB-GENE-110411-60]
5. si:dkey-199m13.9 si:dkey-199m13.9 20 1.893 - 1.000 - 0.893 - - - - -
6. NRP2 NRP2 5 1.893 - 1.000 - 0.893 - - - - -
7. abhd12 ENSDARG00000071004 47 1.888 1.000 0.888 - - - - - - - abhydrolase domain containing 12 [Source:ZFIN;Acc:ZDB-GENE-060929-268]
8. NWD1 ENSDARG00000076110 3 1.884 1.000 - - - - 0.884 - - - NACHT and WD repeat domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-071116-8]
9. CABZ01102230.1 CABZ01102230.1 1 1.877 - - - - 0.877 1.000 - - -
10. ENDOD1_6 ENDOD1_6 2 1.877 - - - - 0.877 1.000 - - -
11. neu3.2 ENSDARG00000010047, ENSDARG00000117176 68 1.854 0.854 - - - - 1.000 - - - sialidase 3 (membrane sialidase), tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040801-262]
12. slc15a1b ENSDARG00000044528 6 1.848 - 0.848 - - - 1.000 - - - solute carrier family 15 (oligopeptide transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4661]
13. dnaaf1 ENSDARG00000012030 58 1.846 0.958 0.888 - - - - - - - dynein, axonemal, assembly factor 1 [Source:ZFIN;Acc:ZDB-GENE-031114-4]
14. crfb4 ENSDARG00000068711 51 1.828 0.828 - - - - 1.000 - - - cytokine receptor family member b4 [Source:ZFIN;Acc:ZDB-GENE-070905-3]
15. MFAP4_6 MFAP4_6 162 1.817 0.817 1.000 - - - - - - -
16. TRAPPC9 ENSDARG00000099118 26 1.81 - 0.942 - - - 0.868 - - - trafficking protein particle complex 9 [Source:HGNC Symbol;Acc:HGNC:30832]
17. eva1bb ENSDARG00000100698 223 1.802 - 0.986 - - - 0.816 - - - eva-1 homolog Bb (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-080204-108]
18. CU694256.1 ENSDARG00000097007 290 1.801 - 0.843 - - - 0.958 - - -
19. BX927369.1 ENSDARG00000105047 21 1.793 - 0.793 - - - 1.000 - - -
20. zgc:172121 ENSDARG00000034430, ENSDARG00000116650 81 1.773 - 0.889 - - - 0.884 - - - zgc:172121 [Source:ZFIN;Acc:ZDB-GENE-030131-9545]
21. gnb3a ENSDARG00000004358, ENSDARG00000113470 11 1.77 - - - 0.893 0.877 - - - - guanine nucleotide binding protein (G protein), beta polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-040718-134]
22. KCNMB3 KCNMB3 5 1.761 - - - - 0.877 0.884 - - -
23. 5S_rRNA_6 5S_rRNA_6 11 1.753 - 1.000 - - 0.753 - - - -
24. si:dkey-270b7.4 si:dkey-270b7.4 11 1.741 - 1.000 - 0.741 - - - - -
25. lpcat2 ENSDARG00000053010 137 1.737 0.959 0.778 - - - - - - - lysophosphatidylcholine acyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050522-229]
26. blnk ENSDARG00000042722 56 1.732 1.000 - - - - 0.732 - - - B cell linker [Source:ZFIN;Acc:ZDB-GENE-040702-4]
27. TPO 2 1.721 - 1.000 - - - - - 0.721 - thyroid peroxidase
28. irf8 ENSDARG00000056407 85 1.715 - 1.000 - - - 0.715 - - - interferon regulatory factor 8 [Source:ZFIN;Acc:ZDB-GENE-040718-367]
29. marveld3 ENSDARG00000099654 113 1.713 0.817 0.896 - - - - - - - MARVEL domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1641]
30. mamdc2a ENSDARG00000098345 21 1.708 1.000 - - - - 0.708 - - - MAM domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-060526-16]
31. pde8a ENSDARG00000087941 11 1.707 - - - - 1.000 - - 0.707 - phosphodiesterase 8A [Source:ZFIN;Acc:ZDB-GENE-070112-622]
32. OVGP1 ENSDARG00000075745 6 1.695 - - 0.818 - 0.877 - - - - oviductal glycoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-140106-118]
33. si:dkeyp-20g2.3 ENSDARG00000093389, ENSDARG00000094279 1 1.695 - - 0.818 - 0.877 - - - - si:dkeyp-20g2.3 [Source:ZFIN;Acc:ZDB-GENE-070705-537]
34. crygs1 ENSDARG00000042992 45 1.694 - - - - 0.877 0.817 - - - crystallin, gamma S1 [Source:ZFIN;Acc:ZDB-GENE-050223-4]
35. si:ch211-10j20.1 si:ch211-10j20.1 24 1.666 - - 0.773 0.893 - - - - -
36. BEND2_1 BEND2_1 45 1.632 - 0.893 - - 0.739 - - - -
37. zgc:112234_5 ENSDARG00000099514, ENSDARG00000102806, ENSDARG00000104588, ENSDARG00000105340, ENSDARG00000105393, ENSDARG00000105414, ENSDARG00000105468, ENSDARG00000105483, ENSDARG00000105507, ENSDARG00000111934 6 1.63 - - - 0.893 0.737 - - - - zgc:112234 [Source:NCBI gene;Acc:554097]
38. mlxip ENSDARG00000059474 12 1.614 - - - - 0.877 0.737 - - - MLX interacting protein [Source:ZFIN;Acc:ZDB-GENE-060526-8]
39. abcd1 ENSDARG00000074876 6 1.609 - - - 0.732 0.877 - - - - ATP-binding cassette, sub-family D (ALD), member 1 [Source:ZFIN;Acc:ZDB-GENE-050517-27]
40. mir301c 84 1.609 0.718 - - - - 0.891 - - - microRNA 301c
41. YIPF7 YIPF7 189 1.605 0.894 0.711 - - - - - - -
42. si:dkey-226m8.9 si:dkey-226m8.9 4 1.598 - - 0.721 - 0.877 - - - -
43. ZFAT ENSDARG00000077987 205 1.555 0.854 0.701 - - - - - - - zinc finger and AT hook domain containing [Source:ZFIN;Acc:ZDB-GENE-130204-2]
44. zgc:154006 ENSDARG00000061797 152 1.546 0.839 0.707 - - - - - - - zgc:154006 [Source:ZFIN;Acc:ZDB-GENE-061013-134]
45. MRAS_1 ENSDARG00000075285 318 1.538 - 0.749 - - - 0.789 - - - muscle RAS oncogene homolog [Source:HGNC Symbol;Acc:HGNC:7227]
46. tsga10 ENSDARG00000052512 79 1.514 0.791 0.723 - - - - - - - testis specific, 10 [Source:ZFIN;Acc:ZDB-GENE-061013-482]
47. CU104716.1 ENSDARG00000109332 12 1.506 - - 0.712 - 0.794 - - - -
48. cx32.2 ENSDARG00000076789 23 1 - 1.000 - - - - - - - connexin 32.2 [Source:ZFIN;Acc:ZDB-GENE-050303-1]
49. sts ENSDARG00000053241 10 1 - - - - - 1.000 - - - steroid sulfatase (microsomal), isozyme S [Source:ZFIN;Acc:ZDB-GENE-030717-5]
50. CABZ01081748.1 ENSDARG00000102139 31 1 - - - - - 1.000 - - - gastrula zinc finger protein XlCGF8.2DB-like [Source:NCBI gene;Acc:100007471]
51. CDKN2B CDKN2B 5 1 1.000 - - - - - - - -
52. rtn4rl2b ENSDARG00000037495 11 1 1.000 - - - - - - - - reticulon 4 receptor-like 2b [Source:ZFIN;Acc:ZDB-GENE-040310-2]
53. egln3 ENSDARG00000032553 280 1 1.000 - - - - - - - - egl-9 family hypoxia-inducible factor 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2541]
54. rnf17 ENSDARG00000056387, ENSDARG00000113359 36 1 - 1.000 - - - - - - - ring finger protein 17 [Source:ZFIN;Acc:ZDB-GENE-030131-6451]
55. ucn3l ENSDARG00000087241 29 1 - - - - - 1.000 - - - urocortin 3, like [Source:ZFIN;Acc:ZDB-GENE-060130-250]
56. twsg1b 7 1 1.000 - - - - - - - - twisted gastrulation BMP signaling modulator 1b
57. si:ch211-202h22.7 ENSDARG00000073912 18 1 1.000 - - - - - - - - si:ch211-202h22.7 [Source:ZFIN;Acc:ZDB-GENE-090313-77]
58. si:dkeyp-67e1.6 ENSDARG00000073947, ENSDARG00000113513, ENSDARG00000113783 20 1 1.000 - - - - - - - - si:dkeyp-67e1.6 [Source:ZFIN;Acc:ZDB-GENE-061207-87]
59. si:ch211-264f5.2 ENSDARG00000078547 12 1 - 1.000 - - - - - - - si:ch211-264f5.2 [Source:ZFIN;Acc:ZDB-GENE-080303-2]
60. CR354426.1 CR354426.1 25 1 1.000 - - - - - - - -
61. si:ch211-66k16.28 ENSDARG00000088423 80 1 - - - - - 1.000 - - - si:ch211-66k16.28 [Source:ZFIN;Acc:ZDB-GENE-120709-59]
62. CDC42EP1 CDC42EP1 50 1 1.000 - - - - - - - -
63. si:dkey-15h8.1 si:dkey-15h8.1 17 1 - - - - - 1.000 - - -
64. MPP3 MPP3 13 1 - - - - - 1.000 - - -
65. zgc:193682 zgc:193682 15 1 1.000 - - - - - - - -
66. si:ch211-213i16.3 2 1 1.000 - - - - - - - - si:ch211-213i16.3, transcript variant X1
67. cnga3b ENSDARG00000012297 2 1 - - - - - 1.000 - - - cyclic nucleotide gated channel alpha 3b [Source:ZFIN;Acc:ZDB-GENE-090312-121]
68. si:dkey-29d8.3 ENSDARG00000091879 21 1 - 1.000 - - - - - - - si:dkey-29d8.3 [Source:ZFIN;Acc:ZDB-GENE-070912-508]
69. pla2g4a pla2g4a 7 1 1.000 - - - - - - - -
70. prkcha ENSDARG00000018382 43 1 - - - - 1.000 - - - - protein kinase C, eta, a [Source:ZFIN;Acc:ZDB-GENE-080402-5]
71. grifin ENSDARG00000033382 141 1 - - - - - 1.000 - - - galectin-related inter-fiber protein [Source:ZFIN;Acc:ZDB-GENE-040801-163]
72. wu:fb63c12 26 1 1.000 - - - - - - - - wu:fb63c12
73. scpp8 ENSDARG00000093124 54 1 - 1.000 - - - - - - - secretory calcium-binding phosphoprotein 8 [Source:ZFIN;Acc:ZDB-GENE-090424-2]
74. fndc7 fndc7 3 1 - - - - - 1.000 - - -
75. BX005472.1 BX005472.1 2 1 - - - - - 1.000 - - -
76. si:ch1073-418f12.2 si:ch1073-418f12.2 15 1 - - - - - 1.000 - - -
77. rspo3 ENSDARG00000070081 4 1 - - - - - 1.000 - - - R-spondin 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9814]
78. zgc:158446 36 1 - 1.000 - - - - - - - zgc:158446
79. ABCC3 ENSDARG00000096662 15 1 - 1.000 - - - - - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 3 [Source:ZFIN;Acc:ZDB-GENE-050517-16]
80. LRTM1 ENSDARG00000098742 21 1 - - - - - 1.000 - - - leucine rich repeats and transmembrane domains 1 [Source:ZFIN;Acc:ZDB-GENE-161221-2]
81. cdh23 ENSDARG00000007561, ENSDARG00000094454 3 1 1.000 - - - - - - - - cadherin-related 23 [Source:ZFIN;Acc:ZDB-GENE-040513-7]
82. si:dkey-25o1.5 si:dkey-25o1.5 5 1 - - - - - 1.000 - - -
83. cx45.6 cx45.6 26 1 - - - - - 1.000 - - -
84. ZACN ZACN 502 1 1.000 - - - - - - - -
85. atg9b ENSDARG00000055292 155 1 - - - - - 1.000 - - - autophagy related 9B [Source:ZFIN;Acc:ZDB-GENE-091111-3]
86. isl1l ENSDARG00000021055, ENSDARG00000110204 4 1 - - - - - 1.000 - - - islet1, like [Source:ZFIN;Acc:ZDB-GENE-040624-1]
87. CR356223.6 CR356223.6 4 1 - 1.000 - - - - - - -
88. btr20 ENSDARG00000102992 4 1 - - - - - 1.000 - - - bloodthirsty-related gene family, member 20 [Source:ZFIN;Acc:ZDB-GENE-060421-3419]
89. OSCP1 ENSDARG00000101888 59 1 1.000 - - - - - - - - organic solute carrier partner 1 [Source:HGNC Symbol;Acc:HGNC:29971]
90. sema6e ENSDARG00000000189 35 1 - 1.000 - - - - - - - sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6E [Source:ZFIN;Acc:ZDB-GENE-040724-119]
91. zgc:172051 ENSDARG00000086569 12 1 - - - - - 1.000 - - - zgc:172051 [Source:ZFIN;Acc:ZDB-GENE-080219-23]
92. si:dkeyp-73d8.8 ENSDARG00000094045 17 1 - - - - - 1.000 - - - si:dkeyp-73d8.8 [Source:ZFIN;Acc:ZDB-GENE-070912-684]
93. si:dkey-188i13.10 ENSDARG00000075151 22 1 - 1.000 - - - - - - - si:dkey-188i13.10 [Source:ZFIN;Acc:ZDB-GENE-090313-208]
94. lrit1b ENSDARG00000099406 12 1 - - - 1.000 - - - - - leucine-rich repeat, immunoglobulin-like and transmembrane domains 1b [Source:ZFIN;Acc:ZDB-GENE-060616-45]
95. foxe1 ENSDARG00000079266 6 1 1.000 - - - - - - - - forkhead box E1 [Source:ZFIN;Acc:ZDB-GENE-061116-1]
96. si:dkeyp-27e10.7 si:dkeyp-27e10.7 5 1 - 1.000 - - - - - - -
97. TRIM14_5 TRIM14_5 2 1 - - - - - 1.000 - - -
98. TTC34 ENSDARG00000091221 3 1 - - - - - 1.000 - - - tetratricopeptide repeat domain 34 [Source:ZFIN;Acc:ZDB-GENE-140106-266]
99. zgc:152857 ENSDARG00000041034 7 1 - - - - - 1.000 - - - zgc:152857 [Source:ZFIN;Acc:ZDB-GENE-060929-72]
100. DNAJC11 1 1 - - - - - 1.000 - - - DnaJ heat shock protein family (Hsp40) member C11

There are 1133 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA