Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:rp71-1g18.1

Gene Name Gene ID Reads Annotation
si:rp71-1g18.1 ENSDARG00000053792, ENSDARG00000111192 437 si:rp71-1g18.1 [Source:ZFIN;Acc:ZDB-GENE-030131-5470]










Genes with expression patterns similar to si:rp71-1g18.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:rp71-1g18.1 ENSDARG00000053792, ENSDARG00000111192 437 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:rp71-1g18.1 [Source:ZFIN;Acc:ZDB-GENE-030131-5470]
2. coro1b ENSDARG00000008660 1220 1.611 - 0.908 - - - - 0.703 - - coronin, actin binding protein, 1B [Source:ZFIN;Acc:ZDB-GENE-040123-3]
3. tfdp1b ENSDARG00000016304 3071 1.576 - - - - - 0.778 0.798 - - transcription factor Dp-1, b [Source:ZFIN;Acc:ZDB-GENE-040426-1746]
4. Sep-10_1 Sep-10_1 424 1.521 - 0.788 - - - 0.733 - - -
5. gna13b ENSDARG00000037924 1963 1.505 - 0.765 - - - - 0.740 - - guanine nucleotide binding protein (G protein), alpha 13b [Source:ZFIN;Acc:ZDB-GENE-030131-8277]
6. WDR60 ENSDARG00000076934 326 1.486 - 0.767 - - - - 0.719 - - WD repeat domain 60 [Source:ZFIN;Acc:ZDB-GENE-140821-1]
7. nipblb ENSDARG00000061052 6109 1.439 - 0.737 - - - 0.702 - - - nipped-B homolog b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-6070]
8. mir10b-2 116 0.973 - 0.973 - - - - - - - microRNA 10b-2
9. snap25b ENSDARG00000058117 469 0.971 - 0.971 - - - - - - - synaptosomal-associated protein, 25b [Source:ZFIN;Acc:ZDB-GENE-980526-392]
10. gabrg2 ENSDARG00000053665 434 0.965 - 0.965 - - - - - - - gamma-aminobutyric acid (GABA) A receptor, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-091118-65]
11. mcm3 ENSDARG00000024204 20 0.964 - 0.964 - - - - - - - minichromosome maintenance complex component 3 [Source:ZFIN;Acc:ZDB-GENE-020419-4]
12. ttc5 ENSDARG00000013329, ENSDARG00000113967 219 0.963 - 0.963 - - - - - - - tetratricopeptide repeat domain 5 [Source:ZFIN;Acc:ZDB-GENE-050417-137]
13. si:ch211-197n1.2 58 0.963 - 0.963 - - - - - - - si:ch211-197n1.2, transcript variant X1
14. gnai2b ENSDARG00000017294 686 0.961 - 0.961 - - - - - - - guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5861]
15. ccni2 ENSDARG00000033046 418 0.959 - 0.959 - - - - - - - cyclin I family, member 2 [Source:ZFIN;Acc:ZDB-GENE-081106-2]
16. uspl1 ENSDARG00000034825, ENSDARG00000109866 457 0.959 - 0.959 - - - - - - - ubiquitin specific peptidase like 1 [Source:ZFIN;Acc:ZDB-GENE-040930-7]
17. CR847998.1 ENSDARG00000104784 518 0.959 - 0.959 - - - - - - -
18. TGIF2 TGIF2 22 0.958 - 0.958 - - - - - - -
19. rusc1 ENSDARG00000078125 617 0.956 - 0.956 - - - - - - - RUN and SH3 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100922-274]
20. NPBWR2 NPBWR2 132 0.956 - 0.956 - - - - - - -
21. RPH3A RPH3A 309 0.955 - 0.955 - - - - - - -
22. htra1a ENSDARG00000032831, ENSDARG00000111829 1008 0.954 - 0.954 - - - - - - - HtrA serine peptidase 1a [Source:ZFIN;Acc:ZDB-GENE-040704-64]
23. pdcd2 ENSDARG00000007892 223 0.954 - 0.954 - - - - - - - programmed cell death 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1236]
24. agtr1b ENSDARG00000045443 232 0.953 - 0.953 - - - - - - - angiotensin II receptor, type 1b [Source:ZFIN;Acc:ZDB-GENE-110411-117]
25. ZBTB11 ENSDARG00000017886 817 0.95 - 0.950 - - - - - - - zinc finger and BTB domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-030131-5055]
26. MAGI3 MAGI3 114 0.95 - 0.950 - - - - - - -
27. KIF3A ENSDARG00000087538, ENSDARG00000109880, ENSDARG00000117005 95 0.949 - 0.949 - - - - - - - kinesin family member 3A [Source:ZFIN;Acc:ZDB-GENE-050417-71]
28. zgc:110821 ENSDARG00000077085 210 0.948 - 0.948 - - - - - - - zgc:110821 [Source:ZFIN;Acc:ZDB-GENE-050227-8]
29. si:dkey-72l17.6 ENSDARG00000102008 42 0.948 - 0.948 - - - - - - - si:dkey-72l17.6 [Source:ZFIN;Acc:ZDB-GENE-110913-49]
30. STK31 ENSDARG00000056339 37 0.948 - 0.948 - - - - - - - serine/threonine kinase 31 [Source:ZFIN;Acc:ZDB-GENE-140106-59]
31. zgc:158856 zgc:158856 23 0.946 - 0.946 - - - - - - -
32. FAM84B ENSDARG00000032859, ENSDARG00000116831 127 0.944 - 0.944 - - - - - - - family with sequence similarity 84, member B [Source:ZFIN;Acc:ZDB-GENE-060929-1130]
33. NHS NHS 409 0.941 - 0.941 - - - - - - -
34. slc41a1 ENSDARG00000070214, ENSDARG00000114707 20 0.941 - 0.941 - - - - - - - solute carrier family 41 (magnesium transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4700]
35. idua ENSDARG00000062904 105 0.941 - 0.941 - - - - - - - iduronidase, alpha-L- [Source:ZFIN;Acc:ZDB-GENE-060526-29]
36. nefma ENSDARG00000021351 790 0.939 - 0.939 - - - - - - - neurofilament, medium polypeptide a [Source:ZFIN;Acc:ZDB-GENE-050522-205]
37. cers4a ENSDARG00000031387 19 0.937 - 0.937 - - - - - - - ceramide synthase 4a [Source:ZFIN;Acc:ZDB-GENE-020808-1]
38. RBM44 RBM44 25 0.937 - 0.937 - - - - - - -
39. si:ch211-126g16.8 3 0.937 - 0.937 - - - - - - - si:ch211-126g16.8, transcript variant X1
40. si:dkey-1b17.5 ENSDARG00000101425 130 0.937 - 0.937 - - - - - - - si:dkey-1b17.5 [Source:ZFIN;Acc:ZDB-GENE-050208-704]
41. olfml3a ENSDARG00000061852 139 0.937 - 0.937 - - - - - - - olfactomedin-like 3a [Source:ZFIN;Acc:ZDB-GENE-060825-31]
42. itln2_1 ENSDARG00000036084, ENSDARG00000093796, ENSDARG00000115958 3 0.937 - 0.937 - - - - - - - intelectin 2 [Source:NCBI gene;Acc:100007792]
43. FKBP15 FKBP15 15 0.937 - 0.937 - - - - - - -
44. CR847511.1 CR847511.1 80 0.937 - 0.937 - - - - - - -
45. SOX8 SOX8 22 0.937 - 0.937 - - - - - - -
46. SSTR2 SSTR2 12 0.937 - 0.937 - - - - - - -
47. ndufs8b ENSDARG00000057055 10 0.937 - 0.937 - - - - - - - NADH:ubiquinone oxidoreductase core subunit S8b [Source:ZFIN;Acc:ZDB-GENE-050522-131]
48. znf142 ENSDARG00000061373 47 0.937 - 0.937 - - - - - - - zinc finger protein 142 [Source:ZFIN;Acc:ZDB-GENE-080512-2]
49. epha8 22 0.937 - 0.937 - - - - - - - eph receptor A8
50. top3a ENSDARG00000052827 148 0.937 - 0.937 - - - - - - - DNA topoisomerase III alpha [Source:ZFIN;Acc:ZDB-GENE-071212-2]
51. VASH1 ENSDARG00000092716 33 0.937 - 0.937 - - - - - - - vasohibin 1 [Source:HGNC Symbol;Acc:HGNC:19964]
52. MYO1C MYO1C 140 0.937 - 0.937 - - - - - - -
53. BX569789.1 ENSDARG00000099678 4 0.937 - 0.937 - - - - - - - GTPase IMAP family member 4-like [Source:NCBI gene;Acc:571582]
54. HTRA4 ENSDARG00000005943 77 0.937 - 0.937 - - - - - - - HtrA serine peptidase 4 [Source:ZFIN;Acc:ZDB-GENE-131120-192]
55. si:dkey-30j10.5 ENSDARG00000093186 13 0.937 - 0.937 - - - - - - - si:dkey-30j10.5 [Source:ZFIN;Acc:ZDB-GENE-091118-81]
56. si:dkey-149i8.3 si:dkey-149i8.3 9 0.937 - 0.937 - - - - - - -
57. opn1mw1 ENSDARG00000097008 9 0.937 - 0.937 - - - - - - - opsin 1 (cone pigments), medium-wave-sensitive, 1 [Source:ZFIN;Acc:ZDB-GENE-990604-42]
58. FRRS1 FRRS1 80 0.937 - 0.937 - - - - - - -
59. CABZ01112647.1 CABZ01112647.1 147 0.937 - 0.937 - - - - - - -
60. CR388013.3 CR388013.3 45 0.937 - 0.937 - - - - - - -
61. megf8_2 ENSDARG00000079751, ENSDARG00000103934 32 0.937 - 0.937 - - - - - - - multiple EGF-like-domains 8 [Source:ZFIN;Acc:ZDB-GENE-090730-1]
62. CCNJ ENSDARG00000059917 115 0.937 - 0.937 - - - - - - - cyclin J [Source:ZFIN;Acc:ZDB-GENE-100721-4]
63. si:dkey-204a24.11 ENSDARG00000058685 3 0.937 - 0.937 - - - - - - - si:dkey-204a24.11 [Source:ZFIN;Acc:ZDB-GENE-120215-129]
64. si:dkeyp-46h3.2 ENSDARG00000092498 23 0.937 - 0.937 - - - - - - - si:dkeyp-46h3.2 [Source:ZFIN;Acc:ZDB-GENE-030131-7351]
65. insig2 ENSDARG00000113367 27 0.937 - 0.937 - - - - - - - insulin induced gene 2 [Source:ZFIN;Acc:ZDB-GENE-040202-1]
66. esr2b ENSDARG00000034181 20 0.937 - 0.937 - - - - - - - estrogen receptor 2b [Source:ZFIN;Acc:ZDB-GENE-030116-1]
67. sst3 61 0.937 - 0.937 - - - - - - - somatostatin 3
68. p2ry10 ENSDARG00000062811, ENSDARG00000111991, ENSDARG00000112838 4 0.937 - 0.937 - - - - - - - P2Y receptor family member 10 [Source:ZFIN;Acc:ZDB-GENE-070410-105]
69. PLA2G4C_2 PLA2G4C_2 10 0.937 - 0.937 - - - - - - -
70. cfhl1 ENSDARG00000105212, ENSDARG00000111582 35 0.937 - 0.937 - - - - - - - complement factor H like 1 [Source:ZFIN;Acc:ZDB-GENE-050208-342]
71. CU367845.1_1 CU367845.1_1 43 0.937 - 0.937 - - - - - - -
72. CABZ01035647.1 CABZ01035647.1 5 0.937 - 0.937 - - - - - - -
73. slc6a6a ENSDARG00000012534 183 0.937 - 0.937 - - - - - - - solute carrier family 6 (neurotransmitter transporter), member 6a [Source:ZFIN;Acc:ZDB-GENE-081104-1]
74. mibp_1 ENSDARG00000101362 193 0.937 - 0.937 - - - - - - - muscle-specific beta 1 integrin binding protein [Source:ZFIN;Acc:ZDB-GENE-030404-1]
75. FMN1_1 FMN1_1 13 0.937 - 0.937 - - - - - - -
76. TTF1_2 TTF1_2 26 0.937 - 0.937 - - - - - - -
77. BX511263.1 BX511263.1 64 0.937 - 0.937 - - - - - - -
78. BX005421.3 ENSDARG00000114309 7 0.937 - 0.937 - - - - - - -
79. si:dkey-118k5.3 ENSDARG00000087736 155 0.937 - 0.937 - - - - - - - si:dkey-118k5.3 [Source:ZFIN;Acc:ZDB-GENE-121214-294]
80. si:dkey-90a24.1 3 0.937 - 0.937 - - - - - - - si:dkey-90a24.1, transcript variant X4
81. TARBP1 TARBP1 17 0.937 - 0.937 - - - - - - -
82. zgc:162509 ENSDARG00000070604, ENSDARG00000095688 25 0.937 - 0.937 - - - - - - - zgc:162509 [Source:ZFIN;Acc:ZDB-GENE-050809-100]
83. MCC ENSDARG00000105237 4 0.937 - 0.937 - - - - - - - MCC, WNT signaling pathway regulator [Source:ZFIN;Acc:ZDB-GENE-141210-1]
84. si:ch211-251f6.7 ENSDARG00000091558 25 0.937 - 0.937 - - - - - - - si:ch211-251f6.7 [Source:ZFIN;Acc:ZDB-GENE-091113-57]
85. pyya ENSDARG00000053449 134 0.937 - 0.937 - - - - - - - peptide YYa [Source:ZFIN;Acc:ZDB-GENE-980526-71]
86. lamb1a_1 ENSDARG00000101209 13 0.937 - 0.937 - - - - - - - laminin, beta 1a [Source:ZFIN;Acc:ZDB-GENE-021226-1]
87. ch25hl1.1 ENSDARG00000039381, ENSDARG00000109469, ENSDARG00000113169 838 0.937 - 0.937 - - - - - - - cholesterol 25-hydroxylase like 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8617]
88. si:ch211-76l23.5 si:ch211-76l23.5 26 0.936 - 0.936 - - - - - - -
89. tnfsf12 ENSDARG00000069376, ENSDARG00000109341 49 0.936 - 0.936 - - - - - - - TNF superfamily member 12 [Source:ZFIN;Acc:ZDB-GENE-060929-376]
90. zgc:173710 zgc:173710 28 0.936 - 0.936 - - - - - - -
91. si:ch211-89o5.3 si:ch211-89o5.3 5 0.936 - 0.936 - - - - - - -
92. tmie ENSDARG00000069423 305 0.936 - 0.936 - - - - - - - transmembrane inner ear [Source:ZFIN;Acc:ZDB-GENE-061207-9]
93. zgc:136254 ENSDARG00000068465 27 0.936 - 0.936 - - - - - - - zgc:136254 [Source:ZFIN;Acc:ZDB-GENE-060421-3062]
94. gcgrb ENSDARG00000036272 54 0.936 - 0.936 - - - - - - - glucagon receptor b [Source:ZFIN;Acc:ZDB-GENE-050516-2]
95. iqsec2 iqsec2 304 0.936 - 0.936 - - - - - - -
96. otof otof 127 0.936 - 0.936 - - - - - - -
97. xdh ENSDARG00000055240 250 0.936 - 0.936 - - - - - - - xanthine dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-070719-9]
98. zgc:114046 ENSDARG00000091728 68 0.936 - 0.936 - - - - - - - zgc:114046 [Source:ZFIN;Acc:ZDB-GENE-050320-24]
99. slc25a35 ENSDARG00000102783 129 0.935 - 0.935 - - - - - - - solute carrier family 25, member 35 [Source:ZFIN;Acc:ZDB-GENE-060526-142]
100. slc35b1 ENSDARG00000038213 465 0.935 - 0.935 - - - - - - - solute carrier family 35, member B1 [Source:ZFIN;Acc:ZDB-GENE-040912-148]

There are 509 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA