Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:rp71-1f1.4

Gene Name Gene ID Reads Annotation
si:rp71-1f1.4 ENSDARG00000092476 11 si:rp71-1f1.4 [Source:ZFIN;Acc:ZDB-GENE-040724-93]










Genes with expression patterns similar to si:rp71-1f1.4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:rp71-1f1.4 ENSDARG00000092476 11 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - si:rp71-1f1.4 [Source:ZFIN;Acc:ZDB-GENE-040724-93]
2. si:dkeyp-67e1.8 si:dkeyp-67e1.8 6 2.824 1.000 1.000 - - - - - 0.824 -
3. DRAXIN ENSDARG00000058256, ENSDARG00000111676 152 2 1.000 1.000 - - - - - - - dorsal inhibitory axon guidance protein [Source:ZFIN;Acc:ZDB-GENE-050913-20]
4. vwc2 ENSDARG00000076495 22 2 1.000 1.000 - - - - - - - von Willebrand factor C domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-090313-315]
5. gpr88 24 2 1.000 1.000 - - - - - - - G protein-coupled receptor 88
6. grm2a ENSDARG00000004150 64 2 1.000 1.000 - - - - - - - glutamate receptor, metabotropic 2a [Source:ZFIN;Acc:ZDB-GENE-030131-8097]
7. lrguk ENSDARG00000069698 5 1.896 1.000 - - - 0.896 - - - - leucine-rich repeats and guanylate kinase domain containing [Source:ZFIN;Acc:ZDB-GENE-050419-232]
8. si:ch211-10j20.7 si:ch211-10j20.7 8 1.875 - 1.000 - - - - - 0.875 -
9. lonrf1 ENSDARG00000075048 13 1.851 1.000 - 0.851 - - - - - - LON peptidase N-terminal domain and ring finger 1 [Source:ZFIN;Acc:ZDB-GENE-101021-4]
10. opcml ENSDARG00000013005 18 1.849 1.000 - - - - 0.849 - - - opioid binding protein/cell adhesion molecule-like [Source:ZFIN;Acc:ZDB-GENE-040927-3]
11. gphnb ENSDARG00000100851 118 1.832 - 1.000 - - - 0.832 - - - gephyrin b [Source:ZFIN;Acc:ZDB-GENE-070705-4]
12. chst1 ENSDARG00000088593, ENSDARG00000112011 102 1.823 - 1.000 - - - 0.823 - - - carbohydrate (keratan sulfate Gal-6) sulfotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040801-21]
13. CU424462.2 CU424462.2 73 1.814 1.000 0.814 - - - - - - -
14. inpp5d ENSDARG00000074283, ENSDARG00000116834 12 1.809 1.000 - - - - - - 0.809 - inositol polyphosphate-5-phosphatase D [Source:ZFIN;Acc:ZDB-GENE-100922-30]
15. kcnk10b ENSDARG00000045956 43 1.809 1.000 - - - - 0.809 - - - potassium channel, subfamily K, member 10b [Source:ZFIN;Acc:ZDB-GENE-050420-31]
16. CR556708.1 ENSDARG00000100565 6 1.801 - 1.000 - 0.801 - - - - - uncharacterized LOC110437832 [Source:NCBI gene;Acc:110437832]
17. zfpm2a ENSDARG00000040123 46 1.796 1.000 - - - - 0.796 - - - zinc finger protein, FOG family member 2a [Source:ZFIN;Acc:ZDB-GENE-060130-4]
18. ITGAE ITGAE 53 1.795 - - - 0.857 - - 0.938 - -
19. lppr5b lppr5b 23 1.795 - 1.000 0.795 - - - - - -
20. fkbp5 ENSDARG00000028396 20 1.787 1.000 - - 0.787 - - - - - FK506 binding protein 5 [Source:ZFIN;Acc:ZDB-GENE-030616-630]
21. MIER3 MIER3 114 1.78 1.000 - - - - - 0.780 - -
22. si:dkey-31e10.5 ENSDARG00000070502 4 1.769 - 1.000 - - 0.769 - - - - si:dkey-31e10.5 [Source:ZFIN;Acc:ZDB-GENE-121214-76]
23. cdh4 ENSDARG00000015002, ENSDARG00000110803, ENSDARG00000110870 97 1.755 - 1.000 - - - 0.755 - - - cadherin 4, type 1, R-cadherin (retinal) [Source:ZFIN;Acc:ZDB-GENE-991207-1]
24. SERINC3 SERINC3 21 1.752 - 1.000 - - - - - 0.752 -
25. FRMPD3 ENSDARG00000074865, ENSDARG00000109705 276 1.75 - 1.000 - - - 0.750 - - - FERM and PDZ domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-100316-9]
26. hes2.2 ENSDARG00000068168 197 1.749 0.749 1.000 - - - - - - - hes family bHLH transcription factor 2, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060825-55]
27. SASH1 SASH1 274 1.746 - 0.952 - - - 0.794 - - -
28. cxxc4 ENSDARG00000077817 197 1.742 1.000 - - - - 0.742 - - - CXXC finger 4 [Source:ZFIN;Acc:ZDB-GENE-090313-179]
29. elovl4b ENSDARG00000027495 107 1.731 1.000 0.731 - - - - - - - ELOVL fatty acid elongase 4b [Source:ZFIN;Acc:ZDB-GENE-030131-7672]
30. APEH ENSDARG00000008703 73 1.731 1.000 0.731 - - - - - - - acylaminoacyl-peptide hydrolase [Source:ZFIN;Acc:ZDB-GENE-030131-9870]
31. uts1 ENSDARG00000014927 35 1.731 1.000 0.731 - - - - - - - urotensin 1 [Source:ZFIN;Acc:ZDB-GENE-041014-348]
32. si:ch211-232k18.2 si:ch211-232k18.2 2 1.725 - 1.000 - - - 0.725 - - -
33. mstnb ENSDARG00000069133 3 1.725 - 1.000 - - - 0.725 - - - myostatin b [Source:ZFIN;Acc:ZDB-GENE-990415-165]
34. mir124-1 10 1.725 1.000 - - - - 0.725 - - - microRNA 124-1
35. TENM2 ENSDARG00000037122 48 1.725 - 1.000 - - - 0.725 - - - teneurin transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:29943]
36. akt3a_1 ENSDARG00000104810 12 1.725 - 1.000 - - - 0.725 - - - v-akt murine thymoma viral oncogene homolog 3a [Source:ZFIN;Acc:ZDB-GENE-050419-180]
37. si:dkey-57a22.12 si:dkey-57a22.12 23 1.725 1.000 - - - - 0.725 - - -
38. si:dkey-103i16.2_1 si:dkey-103i16.2_1 105 1.725 - 1.000 - - - 0.725 - - -
39. CABZ01090303.1 CABZ01090303.1 2 1.725 1.000 - - - - 0.725 - - -
40. tcf23 ENSDARG00000087381 6 1.714 - 1.000 - - - - 0.714 - - transcription factor 23 [Source:ZFIN;Acc:ZDB-GENE-090806-5]
41. BX511189.1 BX511189.1 34 1.714 - 1.000 - - - - 0.714 - -
42. BX470224.1 ENSDARG00000092793 22 1.714 - 1.000 - - - - 0.714 - -
43. zswim7 ENSDARG00000067608 179 1.713 1.000 0.713 - - - - - - - zinc finger, SWIM-type containing 7 [Source:ZFIN;Acc:ZDB-GENE-030131-4255]
44. znf652 ENSDARG00000062302 17 1.704 1.000 0.704 - - - - - - - zinc finger protein 652 [Source:ZFIN;Acc:ZDB-GENE-030131-5857]
45. si:dkeyp-35e5.1 si:dkeyp-35e5.1 12 1.703 1.000 - - - 0.703 - - - -
46. si:ch211-26b3.4 ENSDARG00000075491 50 1.7 1.000 - - - - 0.700 - - - si:ch211-26b3.4 [Source:ZFIN;Acc:ZDB-GENE-081104-60]
47. si:dkey-19f21.8 si:dkey-19f21.8 12 1.687 - - - 0.891 - 0.796 - - -
48. CR932358.2 CR932358.2 15 1.651 - - 0.905 - - - 0.746 - -
49. plaub ENSDARG00000039145 35 1.651 - - 0.802 - - 0.849 - - - plasminogen activator, urokinase b [Source:ZFIN;Acc:ZDB-GENE-030619-15]
50. dnm1a ENSDARG00000010042 43 1.632 0.749 0.883 - - - - - - - dynamin 1a [Source:ZFIN;Acc:ZDB-GENE-081104-27]
51. cnih3 ENSDARG00000014953 25 1.63 - 0.731 0.899 - - - - - - cornichon family AMPA receptor auxiliary protein 3 [Source:ZFIN;Acc:ZDB-GENE-041001-180]
52. kcnc1b ENSDARG00000032959, ENSDARG00000113595 36 1.63 - - - - - 0.706 0.924 - - potassium voltage-gated channel, Shaw-related subfamily, member 1b [Source:ZFIN;Acc:ZDB-GENE-080414-3]
53. si:dkey-156m18.1 si:dkey-156m18.1 13 1.621 - 0.896 - - - 0.725 - - -
54. fam5ca fam5ca 76 1.585 - - - - - 0.760 0.825 - -
55. zgc:174224_2 ENSDARG00000093875 22 1.58 - 0.731 - - - 0.849 - - - zgc:174224 [Source:ZFIN;Acc:ZDB-GENE-071004-118]
56. myb ENSDARG00000053666, ENSDARG00000114024 58 1.576 0.852 - 0.724 - - - - - - v-myb avian myeloblastosis viral oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-991110-14]
57. ADAMTS15_1 ADAMTS15_1 11 1.575 - - - - 0.769 - - 0.806 -
58. nr0b1 ENSDARG00000056541 35 1.573 - 0.731 - 0.842 - - - - - nuclear receptor subfamily 0, group B, member 1 [Source:ZFIN;Acc:ZDB-GENE-070130-1]
59. zgc:194621 ENSDARG00000074696 85 1.568 - 0.774 0.794 - - - - - - zgc:194621 [Source:ZFIN;Acc:ZDB-GENE-081022-130]
60. cntnap5b ENSDARG00000075189 16 1.562 - 0.713 - - - 0.849 - - - contactin associated protein-like 5b [Source:ZFIN;Acc:ZDB-GENE-070705-209]
61. ntng1a ENSDARG00000014973 23 1.558 - - 0.709 - - 0.849 - - - netrin g1a [Source:ZFIN;Acc:ZDB-GENE-091118-13]
62. si:ch73-239k17.1 si:ch73-239k17.1 44 1.553 - 0.704 - - - 0.849 - - -
63. CDHR2_1 CDHR2_1 12 1.543 - 0.829 - - - - 0.714 - -
64. dapk2 dapk2 24 1.539 - - 0.814 - - 0.725 - - -
65. zgc:114081 ENSDARG00000057899, ENSDARG00000113048 5 1.536 - - - - 0.822 - 0.714 - - zgc:114081 [Source:ZFIN;Acc:ZDB-GENE-050913-78]
66. wrnip1 ENSDARG00000005218 695 1.53 - 0.819 - - - - 0.711 - - Werner helicase interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2415]
67. si:dkeyp-77h1.4 ENSDARG00000058248 54 1.527 - 0.704 - - - 0.823 - - - si:dkeyp-77h1.4 [Source:ZFIN;Acc:ZDB-GENE-050208-18]
68. n6amt2 7 1.518 - - - - - - 0.714 0.804 - N-6 adenine-specific DNA methyltransferase 2 (putative), transcript variant X1
69. si:ch211-10a23.2 ENSDARG00000060656 471 1.503 0.797 - - - - 0.706 - - - si:ch211-10a23.2 [Source:ZFIN;Acc:ZDB-GENE-090313-9]
70. CABZ01083442.1 ENSDARG00000105714 36 1.501 - - - - 0.769 - 0.732 - - si:cabz01083442.1 [Source:NCBI gene;Acc:101883419]
71. si:dkey-147f3.4 ENSDARG00000071029, ENSDARG00000092077 36 1.483 0.758 - - - - 0.725 - - - si:dkey-147f3.4 [Source:ZFIN;Acc:ZDB-GENE-061009-29]
72. cacnb4a ENSDARG00000009738 28 1.48 0.732 - - - - - - 0.748 - calcium channel, voltage-dependent, beta 4a subunit [Source:ZFIN;Acc:ZDB-GENE-080320-2]
73. gpr158 gpr158 52 1.476 - - - 0.747 - 0.729 - - -
74. kctd12b ENSDARG00000037507, ENSDARG00000111869 21 1.471 - - - - - 0.725 0.746 - - potassium channel tetramerisation domain containing 12b [Source:ZFIN;Acc:ZDB-GENE-050417-104]
75. BAI1_1 BAI1_1 57 1.454 - 0.704 - - - 0.750 - - -
76. antxr1a ENSDARG00000025672 32 1.446 0.732 - - - - - 0.714 - - ANTXR cell adhesion molecule 1a [Source:ZFIN;Acc:ZDB-GENE-110411-15]
77. cyp39a1 ENSDARG00000017982 4 1.439 - - - - - 0.725 0.714 - - cytochrome P450, family 39, subfamily A, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-041014-339]
78. foxb1a ENSDARG00000089042 101 1.437 0.733 0.704 - - - - - - - forkhead box B1a [Source:ZFIN;Acc:ZDB-GENE-990616-47]
79. mylkb ENSDARG00000004753 95 1.425 - - - - 0.700 0.725 - - - myosin light chain kinase b [Source:ZFIN;Acc:ZDB-GENE-041111-150]
80. ovca2 ENSDARG00000103748 38 1.423 - 0.709 - - - - 0.714 - - OVCA2, serine hydrolase domain containing [Source:ZFIN;Acc:ZDB-GENE-050522-115]
81. htr1b ENSDARG00000053987 11 1 1.000 - - - - - - - - 5-hydroxytryptamine (serotonin) receptor 1B [Source:ZFIN;Acc:ZDB-GENE-081022-141]
82. zgc:158846 ENSDARG00000058462, ENSDARG00000113282 161 1 1.000 - - - - - - - - zgc:158846 [Source:ZFIN;Acc:ZDB-GENE-070209-50]
83. ddr2b ENSDARG00000058695 7 1 1.000 - - - - - - - - discoidin domain receptor tyrosine kinase 2b [Source:ZFIN;Acc:ZDB-GENE-060503-361]
84. si:dkey-3d4.1 si:dkey-3d4.1 37 1 - 1.000 - - - - - - -
85. ccdc64 ccdc64 2 1 - 1.000 - - - - - - -
86. si:dkey-103i16.2 si:dkey-103i16.2 492 1 - 1.000 - - - - - - -
87. GRIK1 GRIK1 1 1 - 1.000 - - - - - - -
88. gcshb ENSDARG00000105187 182 1 1.000 - - - - - - - - glycine cleavage system protein H (aminomethyl carrier), b [Source:ZFIN;Acc:ZDB-GENE-040718-319]
89. BX936303.1 ENSDARG00000103105 26 1 - 1.000 - - - - - - -
90. si:ch211-208f21.2 ENSDARG00000094177 61 1 1.000 - - - - - - - - si:ch211-208f21.2 [Source:ZFIN;Acc:ZDB-GENE-110914-134]
91. stpg1 ENSDARG00000103765 19 1 1.000 - - - - - - - - sperm-tail PG-rich repeat containing 1 [Source:ZFIN;Acc:ZDB-GENE-070705-373]
92. fam160b1 ENSDARG00000060168 22 1 1.000 - - - - - - - - family with sequence similarity 160, member B1 [Source:ZFIN;Acc:ZDB-GENE-070424-63]
93. lepa ENSDARG00000091085 11 1 - 1.000 - - - - - - - leptin a [Source:ZFIN;Acc:ZDB-GENE-081001-1]
94. BX649497.1 BX649497.1 0 1 - 1.000 - - - - - - -
95. nyx ENSDARG00000061791 2 1 - 1.000 - - - - - - - nyctalopin [Source:ZFIN;Acc:ZDB-GENE-061026-3]
96. si:ch211-219a15.3 ENSDARG00000087659 12 1 1.000 - - - - - - - - si:ch211-219a15.3 [Source:ZFIN;Acc:ZDB-GENE-060503-214]
97. camta1a ENSDARG00000077428, ENSDARG00000116922 176 1 - 1.000 - - - - - - - calmodulin binding transcription activator 1a [Source:ZFIN;Acc:ZDB-GENE-090312-183]
98. SGSM1 SGSM1 254 1 - 1.000 - - - - - - -
99. si:dkeyp-33c10.5 11 1 - 1.000 - - - - - - - si:dkeyp-33c10.5, transcript variant X2
100. ppp1r3db ENSDARG00000076248 32 1 - 1.000 - - - - - - - protein phosphatase 1, regulatory subunit 3Db [Source:ZFIN;Acc:ZDB-GENE-110201-1]

There are 1324 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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