Zebrafish data search
Results for si:rp71-1c10.11
| Gene Name | Gene ID | Reads | Annotation |
|---|---|---|---|
| si:rp71-1c10.11 | ENSDARG00000096721 | 39 | si:rp71-1c10.11 [Source:ZFIN;Acc:ZDB-GENE-130603-61] |
Genes with expression patterns similar to si:rp71-1c10.11
| Nr. | Gene Name | Gene ID | Reads | Σ scores | 28hpf trunk1 | 28hpf trunk2 | 28hpf whole1 | 28hpf whole2 | 28hpf whole3 PA | 40hpf trunk1 | 40hpf trunk2 | 40hpf whole embryo1 | 40hpf whole embryo2 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | si:rp71-1c10.11 | ENSDARG00000096721 | 39 | 6 | - | - | 1.000 | - | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | si:rp71-1c10.11 [Source:ZFIN;Acc:ZDB-GENE-130603-61] |
| 2. | sox17 | ENSDARG00000101717 | 11 | 1.969 | - | - | 1.000 | - | - | 0.969 | - | - | - | SRY (sex determining region Y)-box 17 [Source:ZFIN;Acc:ZDB-GENE-991213-1] |
| 3. | cyp2k19 | ENSDARG00000101861 | 129 | 1.874 | - | - | 1.000 | - | - | 0.874 | - | - | - | cytochrome P450, family 2, subfamily k, polypeptide 19 [Source:ZFIN;Acc:ZDB-GENE-091211-1] |
| 4. | racgap1 | ENSDARG00000015460 | 38 | 1.874 | - | - | - | - | 1.000 | 0.874 | - | - | - | Rac GTPase activating protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1917] |
| 5. | slc13a1 | ENSDARG00000045638, ENSDARG00000114835 | 13 | 1.863 | - | - | - | - | - | 0.960 | 0.903 | - | - | solute carrier family 13 member 1 [Source:ZFIN;Acc:ZDB-GENE-031222-3] |
| 6. | hcrt | ENSDARG00000070932 | 4 | 1.823 | - | - | - | - | 0.920 | - | 0.903 | - | - | hypocretin (orexin) neuropeptide precursor [Source:ZFIN;Acc:ZDB-GENE-040324-1] |
| 7. | tacr2 | ENSDARG00000074509, ENSDARG00000109849, ENSDARG00000112566 | 4 | 1.823 | - | - | - | - | 0.920 | - | 0.903 | - | - | tachykinin receptor 2 [Source:ZFIN;Acc:ZDB-GENE-090312-188] |
| 8. | FGL1 | ENSDARG00000105380 | 147 | 1.81 | - | - | - | - | - | - | 0.827 | 0.983 | - | fibrinogen-like 1 [Source:ZFIN;Acc:ZDB-GENE-130815-1] |
| 9. | or111-3 | ENSDARG00000086633 | 1 | 1.794 | - | - | - | - | 0.920 | 0.874 | - | - | - | odorant receptor, family D, subfamily 111, member 3 [Source:ZFIN;Acc:ZDB-GENE-010308-17] |
| 10. | CU457819.2 | ENSDARG00000105374 | 8 | 1.78 | - | - | 0.907 | - | - | - | - | - | 0.873 | Histone H3.2 [Source:UniProtKB/Swiss-Prot;Acc:Q4QRF4] |
| 11. | CCDC74B | CCDC74B | 8 | 1.777 | - | - | - | - | - | 0.874 | 0.903 | - | - | |
| 12. | CCDC141 | ENSDARG00000095675 | 94 | 1.761 | - | - | - | - | - | - | - | 0.992 | 0.769 | coiled-coil domain containing 141 [Source:ZFIN;Acc:ZDB-GENE-081104-472] |
| 13. | or109-11 | ENSDARG00000105708 | 3 | 1.76 | - | - | 1.000 | - | 0.760 | - | - | - | - | odorant receptor, family D, subfamily 109, member 11 [Source:ZFIN;Acc:ZDB-GENE-070806-74] |
| 14. | si:dkey-77p23.1 | si:dkey-77p23.1 | 4 | 1.756 | - | - | 0.933 | - | 0.823 | - | - | - | - | |
| 15. | si:ch211-271g18.2 | si:ch211-271g18.2 | 34 | 1.747 | - | - | 1.000 | - | - | - | 0.747 | - | - | |
| 16. | CR339051.1 | CR339051.1 | 9 | 1.722 | - | - | 0.819 | - | - | - | 0.903 | - | - | |
| 17. | unc5da | ENSDARG00000092722 | 8 | 1.716 | - | - | - | - | 0.966 | 0.750 | - | - | - | unc-5 netrin receptor Da [Source:ZFIN;Acc:ZDB-GENE-080908-2] |
| 18. | akap1a | ENSDARG00000089802 | 5 | 1.682 | - | - | - | - | 0.808 | 0.874 | - | - | - | A kinase (PRKA) anchor protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-5980] |
| 19. | slc4a11 | ENSDARG00000075532, ENSDARG00000115789 | 20 | 1.681 | - | - | - | - | - | 0.778 | 0.903 | - | - | solute carrier family 4, sodium borate transporter, member 11 [Source:ZFIN;Acc:ZDB-GENE-090313-183] |
| 20. | mir301c | 84 | 1.671 | - | - | - | - | - | - | 0.709 | 0.962 | - | microRNA 301c | |
| 21. | sst3 | 61 | 1.648 | - | - | - | - | 0.745 | - | 0.903 | - | - | somatostatin 3 | |
| 22. | FAM150A | 14 | 1.619 | - | - | 0.716 | - | - | - | 0.903 | - | - | family with sequence similarity 150 member A, transcript variant X2 | |
| 23. | ARHGAP17 | ARHGAP17 | 29 | 1.607 | - | - | - | - | 0.823 | - | - | - | 0.784 | |
| 24. | mtnr1aa | ENSDARG00000037545, ENSDARG00000114868 | 40 | 1.596 | - | - | 0.805 | - | - | - | 0.791 | - | - | melatonin receptor 1A a [Source:ZFIN;Acc:ZDB-GENE-990415-155] |
| 25. | pnp6 | ENSDARG00000040942, ENSDARG00000114753 | 10 | 1.575 | - | - | - | - | 0.701 | 0.874 | - | - | - | purine nucleoside phosphorylase 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1800] |
| 26. | PEG3_27 | PEG3_27 | 10 | 1 | - | - | 1.000 | - | - | - | - | - | - | |
| 27. | CT009593.1 | CT009593.1 | 1 | 1 | - | - | 1.000 | - | - | - | - | - | - | |
| 28. | FAM131A | ENSDARG00000077022 | 3 | 1 | - | - | 1.000 | - | - | - | - | - | - | family with sequence similarity 131, member A [Source:ZFIN;Acc:ZDB-GENE-080204-112] |
| 29. | si:ch211-227e10.2 | ENSDARG00000100414 | 1 | 1 | - | - | 1.000 | - | - | - | - | - | - | si:ch211-227e10.2 [Source:ZFIN;Acc:ZDB-GENE-050419-8] |
| 30. | CABZ01023423.1 | CABZ01023423.1 | 8 | 1 | - | - | 1.000 | - | - | - | - | - | - | |
| 31. | BX470224.1 | ENSDARG00000092793 | 22 | 1 | - | - | 1.000 | - | - | - | - | - | - | |
| 32. | CR936484.1 | CR936484.1 | 1 | 1 | - | - | 1.000 | - | - | - | - | - | - | |
| 33. | NUMA1_1 | NUMA1_1 | 1 | 1 | - | - | 1.000 | - | - | - | - | - | - | |
| 34. | qdprb2 | ENSDARG00000086859, ENSDARG00000090118, ENSDARG00000113718, ENSDARG00000116809 | 5 | 1 | - | - | 1.000 | - | - | - | - | - | - | quinoid dihydropteridine reductase b2 [Source:ZFIN;Acc:ZDB-GENE-070720-19] |
| 35. | si:dkey-88l16.5 | ENSDARG00000094850 | 12 | 1 | - | - | 1.000 | - | - | - | - | - | - | si:dkey-88l16.5 [Source:ZFIN;Acc:ZDB-GENE-091204-332] |
| 36. | adrb3b | ENSDARG00000052919 | 16 | 1 | - | - | 1.000 | - | - | - | - | - | - | adrenoceptor beta 3b [Source:ZFIN;Acc:ZDB-GENE-081022-154] |
| 37. | ANO1 | ENSDARG00000102335 | 1 | 1 | - | - | 1.000 | - | - | - | - | - | - | anoctamin 1, calcium activated chloride channel [Source:ZFIN;Acc:ZDB-GENE-121127-3] |
| 38. | mical3a_1 | ENSDARG00000021979, ENSDARG00000097017 | 1 | 1 | - | - | 1.000 | - | - | - | - | - | - | microtubule associated monooxygenase, calponin and LIM domain containing 3a [Source:ZFIN;Acc:ZDB-GENE-050126-2] |
| 39. | C19H1orf216 | 1 | 1 | - | - | 1.000 | - | - | - | - | - | - | chromosome 19 C1orf216 homolog | |
| 40. | si:ch211-219f7.3 | si:ch211-219f7.3 | 48 | 1 | - | - | 1.000 | - | - | - | - | - | - | |
| 41. | si:ch211-287c22.2 | si:ch211-287c22.2 | 1 | 1 | - | - | 1.000 | - | - | - | - | - | - | |
| 42. | si:ch211-126g16.8 | 3 | 1 | - | - | 1.000 | - | - | - | - | - | - | si:ch211-126g16.8, transcript variant X1 | |
| 43. | mib | mib | 1 | 1 | - | - | 1.000 | - | - | - | - | - | - | |
| 44. | CCNO | 21 | 1 | - | - | 1.000 | - | - | - | - | - | - | cyclin O | |
| 45. | si:dkey-30j22.1 | ENSDARG00000042829 | 25 | 1 | - | - | 1.000 | - | - | - | - | - | - | si:dkey-30j22.1 [Source:ZFIN;Acc:ZDB-GENE-041001-184] |
| 46. | GSTK1 | ENSDARG00000056510 | 14 | 1 | - | - | - | - | 1.000 | - | - | - | - | glutathione S-transferase kappa 1 [Source:ZFIN;Acc:ZDB-GENE-040718-298] |
| 47. | slc6a1l | ENSDARG00000041205 | 1 | 1 | - | - | 1.000 | - | - | - | - | - | - | solute carrier family 6 (neurotransmitter transporter, GABA), member 1, like [Source:ZFIN;Acc:ZDB-GENE-041210-296] |
| 48. | cfhl5 | ENSDARG00000105052 | 25 | 1 | - | - | 1.000 | - | - | - | - | - | - | complement factor H like 5 [Source:ZFIN;Acc:ZDB-GENE-050208-782] |
| 49. | gramd4 | gramd4 | 4 | 1 | - | - | 1.000 | - | - | - | - | - | - | |
| 50. | grik5 | ENSDARG00000101449, ENSDARG00000111384 | 75 | 1 | - | - | 1.000 | - | - | - | - | - | - | glutamate receptor, ionotropic, kainate 5 [Source:ZFIN;Acc:ZDB-GENE-070821-6] |
| 51. | si:dkeyp-52c3.2 | ENSDARG00000070516 | 92 | 1 | - | - | 1.000 | - | - | - | - | - | - | si:dkeyp-52c3.2 [Source:ZFIN;Acc:ZDB-GENE-110411-46] |
| 52. | U1_10 | U1_10 | 1 | 1 | - | - | 1.000 | - | - | - | - | - | - | |
| 53. | CUZD1_2 | CUZD1_2 | 1 | 1 | - | - | 1.000 | - | - | - | - | - | - | |
| 54. | CABZ01077223.1 | CABZ01077223.1 | 1 | 1 | - | - | 1.000 | - | - | - | - | - | - | |
| 55. | PEBP4 | ENSDARG00000107065 | 4 | 1 | - | - | 1.000 | - | - | - | - | - | - | phosphatidylethanolamine binding protein 4 [Source:HGNC Symbol;Acc:HGNC:28319] |
| 56. | pglyrp2 | ENSDARG00000062998 | 11 | 1 | - | - | 1.000 | - | - | - | - | - | - | peptidoglycan recognition protein 2 [Source:ZFIN;Acc:ZDB-GENE-071227-1] |
| 57. | htr6 | ENSDARG00000016095 | 9 | 1 | - | - | 1.000 | - | - | - | - | - | - | 5-hydroxytryptamine (serotonin) receptor 6 [Source:ZFIN;Acc:ZDB-GENE-030131-7839] |
| 58. | GBGT1 | GBGT1 | 1 | 1 | - | - | 1.000 | - | - | - | - | - | - | |
| 59. | CT573234.2 | CT573234.2 | 1 | 1 | - | - | 1.000 | - | - | - | - | - | - | |
| 60. | RIMS2 | RIMS2 | 2 | 1 | - | - | 1.000 | - | - | - | - | - | - | |
| 61. | BX927234.2 | ENSDARG00000115246 | 3 | 1 | - | - | 1.000 | - | - | - | - | - | - | |
| 62. | si:ch211-207m11.3 | si:ch211-207m11.3 | 401 | 1 | - | - | 1.000 | - | - | - | - | - | - | |
| 63. | CR759920.2 | CR759920.2 | 1 | 1 | - | - | 1.000 | - | - | - | - | - | - | |
| 64. | zgc:136639os | zgc:136639os | 2 | 1 | - | - | - | - | 1.000 | - | - | - | - | |
| 65. | slc4a4b | ENSDARG00000044808 | 9 | 1 | - | - | 1.000 | - | - | - | - | - | - | solute carrier family 4 (sodium bicarbonate cotransporter), member 4b [Source:ZFIN;Acc:ZDB-GENE-091030-1] |
| 66. | wu:fi13g07 | wu:fi13g07 | 1 | 1 | - | - | 1.000 | - | - | - | - | - | - | |
| 67. | FP340265.3 | FP340265.3 | 1 | 1 | - | - | 1.000 | - | - | - | - | - | - | |
| 68. | LRRK1_1 | LRRK1_1 | 11 | 1 | - | - | 1.000 | - | - | - | - | - | - | |
| 69. | elnb | ENSDARG00000069017 | 744 | 0.992 | - | - | - | - | - | - | - | 0.992 | - | elastin b [Source:ZFIN;Acc:ZDB-GENE-061212-2] |
| 70. | si:ch211-64i20.3 | ENSDARG00000089934, ENSDARG00000105063 | 42 | 0.992 | - | - | - | - | - | - | - | 0.992 | - | si:ch211-64i20.3 [Source:ZFIN;Acc:ZDB-GENE-110913-55] |
| 71. | trpc1 | ENSDARG00000061203 | 62 | 0.991 | - | - | - | - | - | - | - | 0.991 | - | transient receptor potential cation channel, subfamily C, member 1 [Source:ZFIN;Acc:ZDB-GENE-070830-1] |
| 72. | si:dkey-85k15.11 | ENSDARG00000090817 | 20 | 0.991 | - | - | - | - | - | - | - | 0.991 | - | si:dkey-85k15.11 [Source:ZFIN;Acc:ZDB-GENE-100922-4] |
| 73. | si:ch211-238g23.1 | ENSDARG00000055746 | 23 | 0.991 | - | - | - | - | - | - | - | 0.991 | - | si:ch211-238g23.1 [Source:ZFIN;Acc:ZDB-GENE-050420-173] |
| 74. | CABZ01072534.1 | CABZ01072534.1 | 69 | 0.991 | - | - | - | - | - | - | - | 0.991 | - | |
| 75. | flt3 | ENSDARG00000058503 | 32 | 0.991 | - | - | - | - | - | - | - | 0.991 | - | fms-related tyrosine kinase 3 [Source:ZFIN;Acc:ZDB-GENE-050114-4] |
| 76. | styxl1 | ENSDARG00000026338 | 29 | 0.991 | - | - | - | - | - | - | - | 0.991 | - | serine/threonine/tyrosine interacting-like 1 [Source:ZFIN;Acc:ZDB-GENE-040912-45] |
| 77. | CSMD3 | CSMD3 | 0 | 0.991 | - | - | - | - | - | - | - | 0.991 | - | |
| 78. | MVD | MVD | 32 | 0.991 | - | - | - | - | - | - | - | 0.991 | - | |
| 79. | BX649448.1 | ENSDARG00000079441 | 65 | 0.99 | - | - | - | - | - | - | - | 0.990 | - | |
| 80. | cbx8a_1 | ENSDARG00000087327 | 109 | 0.99 | - | - | - | - | - | - | - | 0.990 | - | chromobox homolog 8a (Pc class homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040405-1] |
| 81. | zgc:110224 | ENSDARG00000032263 | 147 | 0.989 | - | - | - | - | - | - | - | 0.989 | - | zgc:110224 [Source:ZFIN;Acc:ZDB-GENE-050417-120] |
| 82. | si:ch211-53m15.1 | si:ch211-53m15.1 | 28 | 0.988 | - | - | - | - | - | - | - | 0.988 | - | |
| 83. | ZNF337_15 | ZNF337_15 | 135 | 0.988 | - | - | - | - | - | - | - | 0.988 | - | |
| 84. | BX004880.2 | BX004880.2 | 83 | 0.988 | - | - | - | - | - | - | - | 0.988 | - | |
| 85. | pou1f1 | ENSDARG00000058924, ENSDARG00000110816, ENSDARG00000115109 | 17 | 0.988 | - | - | 0.988 | - | - | - | - | - | - | POU class 1 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040630-7] |
| 86. | si:dkey-50i6.5 | ENSDARG00000101320 | 95 | 0.988 | - | - | - | - | - | - | - | 0.988 | - | si:dkey-50i6.5 [Source:ZFIN;Acc:ZDB-GENE-081031-53] |
| 87. | btbd3b | ENSDARG00000087517 | 107 | 0.988 | - | - | - | - | - | - | - | 0.988 | - | BTB (POZ) domain containing 3b [Source:ZFIN;Acc:ZDB-GENE-041210-282] |
| 88. | htr3a | ENSDARG00000089212 | 51 | 0.987 | - | - | - | - | - | - | - | 0.987 | - | 5-hydroxytryptamine (serotonin) receptor 3A [Source:ZFIN;Acc:ZDB-GENE-071012-5] |
| 89. | nebl | ENSDARG00000021200 | 40 | 0.987 | - | - | - | - | - | - | - | 0.987 | - | nebulette [Source:ZFIN;Acc:ZDB-GENE-050320-151] |
| 90. | chpfb | ENSDARG00000078037 | 30 | 0.987 | - | - | - | - | - | - | - | 0.987 | - | chondroitin polymerizing factor b [Source:ZFIN;Acc:ZDB-GENE-100504-1] |
| 91. | GPR153 | ENSDARG00000087601 | 48 | 0.986 | - | - | - | - | - | - | - | 0.986 | - | G protein-coupled receptor 153 [Source:ZFIN;Acc:ZDB-GENE-050823-7] |
| 92. | parla | ENSDARG00000039310 | 360 | 0.986 | - | - | - | - | - | - | - | 0.986 | - | presenilin associated, rhomboid-like a [Source:ZFIN;Acc:ZDB-GENE-050327-8] |
| 93. | si:ch211-71m22.1 | ENSDARG00000058638 | 169 | 0.986 | - | - | - | - | - | - | - | 0.986 | - | si:ch211-71m22.1 [Source:ZFIN;Acc:ZDB-GENE-070705-193] |
| 94. | zgc:112146 | ENSDARG00000104829 | 34 | 0.985 | - | - | - | - | - | - | - | 0.985 | - | zgc:112146 [Source:ZFIN;Acc:ZDB-GENE-050417-237] |
| 95. | si:ch211-207m11.2 | si:ch211-207m11.2 | 63 | 0.985 | - | - | - | - | - | - | - | 0.985 | - | |
| 96. | avpr2ab | ENSDARG00000029219 | 97 | 0.985 | - | - | - | - | - | - | - | 0.985 | - | arginine vasopressin receptor 2a, duplicate b [Source:ZFIN;Acc:ZDB-GENE-110411-48] |
| 97. | mtpap | ENSDARG00000076155, ENSDARG00000112828 | 272 | 0.984 | - | - | - | - | - | - | - | 0.984 | - | mitochondrial poly(A) polymerase [Source:ZFIN;Acc:ZDB-GENE-101208-3] |
| 98. | si:dkeyp-22c6.1 | si:dkeyp-22c6.1 | 71 | 0.984 | - | - | - | - | - | - | - | 0.984 | - | |
| 99. | si:dkey-209n16.2 | ENSDARG00000095914 | 27 | 0.982 | - | - | 0.982 | - | - | - | - | - | - | si:dkey-209n16.2 [Source:ZFIN;Acc:ZDB-GENE-110408-44] |
| 100. | CABZ01117079.1 | CABZ01117079.1 | 123 | 0.982 | - | - | - | - | - | - | - | 0.982 | - |
There are 925 more genes with r >= 0.7
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C.
Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA