Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:rp71-18l21.1

Gene Name Gene ID Reads Annotation
si:rp71-18l21.1 si:rp71-18l21.1 2










Genes with expression patterns similar to si:rp71-18l21.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:rp71-18l21.1 si:rp71-18l21.1 2 4 1.000 - - 1.000 1.000 - - - 1.000
2. CACNA2D1_1 ENSDARG00000073752 2 2 1.000 - - - - - - - 1.000 calcium voltage-gated channel auxiliary subunit alpha2delta 1 [Source:HGNC Symbol;Acc:HGNC:1399]
3. PDE1C PDE1C 1 2 1.000 - - - 1.000 - - - -
4. ccdc14 ENSDARG00000098734 3 2 - - - - 1.000 - - - 1.000 coiled-coil domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-120215-134]
5. PTCHD2 PTCHD2 2 2 1.000 - - - 1.000 - - - -
6. CABZ01117474.1 CABZ01117474.1 2 2 1.000 - - - 1.000 - - - -
7. ptger2a ENSDARG00000011434 6 1.874 - - - 0.874 1.000 - - - - prostaglandin E receptor 2a (subtype EP2) [Source:ZFIN;Acc:ZDB-GENE-040426-1321]
8. si:dkey-111i23.1 ENSDARG00000094811 1 1.874 - - - 0.874 1.000 - - - - si:dkey-111i23.1 [Source:ZFIN;Acc:ZDB-GENE-070912-351]
9. rhpn1 ENSDARG00000052454 3 1.84 - - - 0.840 1.000 - - - - rhophilin, Rho GTPase binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-081031-79]
10. si:dkeyp-35f12.3 si:dkeyp-35f12.3 3 1.764 0.764 - - - 1.000 - - - -
11. si:ch211-197e7.8 si:ch211-197e7.8 4 1.761 - - - 1.000 0.761 - - - -
12. si:ch211-117m20.4 ENSDARG00000094286 7 1.761 1.000 - - - 0.761 - - - - si:ch211-117m20.4 [Source:ZFIN;Acc:ZDB-GENE-060526-20]
13. dnajc5b ENSDARG00000058147 6 1.701 - - - 0.701 1.000 - - - - DnaJ (Hsp40) homolog, subfamily C, member 5 beta [Source:ZFIN;Acc:ZDB-GENE-050413-1]
14. otomp ENSDARG00000040306 682 1.602 - - - 0.800 0.802 - - - - otolith matrix protein [Source:ZFIN;Acc:ZDB-GENE-040709-1]
15. gsc ENSDARG00000059073, ENSDARG00000111184, ENSDARG00000115937 152 1.573 - - - 0.847 0.726 - - - - goosecoid [Source:ZFIN;Acc:ZDB-GENE-980528-2060]
16. hs6st3b ENSDARG00000069500 5 1 1.000 - - - - - - - - heparan sulfate 6-O-sulfotransferase 3b [Source:ZFIN;Acc:ZDB-GENE-070103-3]
17. ARHGAP40 ARHGAP40 2 1 - - - - - - - - 1.000
18. CABZ01084613.1 CABZ01084613.1 22 1 - - - - - - - - 1.000
19. CABZ01076758.1 ENSDARG00000100810 3 1 - - - - - - - - 1.000
20. PLEKHA1 PLEKHA1 5 1 - - - - - - - - 1.000
21. gnrhr2 ENSDARG00000003553, ENSDARG00000113696 0 1 - - - - 1.000 - - - - gonadotropin releasing hormone receptor 2 [Source:ZFIN;Acc:ZDB-GENE-090128-3]
22. fgd5a ENSDARG00000088801 3 1 - - - - - - - - 1.000 FYVE, RhoGEF and PH domain containing 5a [Source:ZFIN;Acc:ZDB-GENE-090428-3]
23. TSPEAR TSPEAR 9 1 - - - - 1.000 - - - -
24. U3_9 U3_9 4 1 - - - - 1.000 - - - -
25. si:dkey-34f16.9 si:dkey-34f16.9 1 1 1.000 - - - - - - - -
26. PLCXD2 ENSDARG00000058200 8 1 - - - - - - - - 1.000 phosphatidylinositol-specific phospholipase C, X domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-091204-217]
27. SNORD35_2 SNORD35_2 5 1 - - - - - - - - 1.000
28. EIF4G3 EIF4G3 24 1 - - - 1.000 - - - - -
29. si:dkey-94e7.2 ENSDARG00000068474 14 1 - - - - 1.000 - - - - si:dkey-94e7.2 [Source:ZFIN;Acc:ZDB-GENE-070912-611]
30. fam57bb ENSDARG00000074564 2 1 - - - - 1.000 - - - - family with sequence similarity 57, member Bb [Source:ZFIN;Acc:ZDB-GENE-110603-2]
31. BRSK2_2 BRSK2_2 3 1 - - - - - - - - 1.000
32. trpm5 ENSDARG00000059792 3 1 - - - - - - - - 1.000 transient receptor potential cation channel, subfamily M, member 5 [Source:ZFIN;Acc:ZDB-GENE-060503-736]
33. hdhd2 ENSDARG00000024728 5 1 - - - - - - - - 1.000 haloacid dehalogenase-like hydrolase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-050320-37]
34. CU655969.1 CU655969.1 0 1 - - - - 1.000 - - - -
35. SNORA32 SNORA32 10 1 - - - - - - - - 1.000
36. mmrn2a ENSDARG00000076135 37 1 1.000 - - - - - - - - multimerin 2a [Source:ZFIN;Acc:ZDB-GENE-080424-3]
37. si:ch211-204a13.1 si:ch211-204a13.1 6 1 - - - - - - - - 1.000
38. CABZ01001466.1 CABZ01001466.1 1 1 - - - - 1.000 - - - -
39. zgc:77938 ENSDARG00000088366 74 1 1.000 - - - - - - - - zgc:77938 [Source:ZFIN;Acc:ZDB-GENE-040426-1910]
40. KIAA2026 0 1 - - - - - - - - 1.000 KIAA2026 ortholog
41. si:ch211-105d18.7 si:ch211-105d18.7 6 1 - - - - - - - - 1.000
42. serinc2l ENSDARG00000053425 5 1 1.000 - - - - - - - - serine incorporator 2, like [Source:ZFIN;Acc:ZDB-GENE-100921-58]
43. BX571760.2 BX571760.2 1 1 - - - - - - - - 1.000
44. P2RY11 ENSDARG00000014929 75 1 1.000 - - - - - - - - purinergic receptor P2Y11 [Source:ZFIN;Acc:ZDB-GENE-111221-4]
45. AL929453.1 ENSDARG00000115950 31 1 1.000 - - - - - - - -
46. cd226 ENSDARG00000045391 2 1 - - - - 1.000 - - - - CD226 molecule [Source:ZFIN;Acc:ZDB-GENE-070112-1322]
47. si:dkey-165b20.3 ENSDARG00000099544 6 1 - - - - - - - - 1.000 si:dkey-165b20.3 [Source:ZFIN;Acc:ZDB-GENE-110913-172]
48. zgc:172271 ENSDARG00000013240 2 1 - - - - 1.000 - - - - zgc:172271 [Source:ZFIN;Acc:ZDB-GENE-080204-110]
49. asz1 ENSDARG00000004823, ENSDARG00000116151 8 1 - - - - - - - - 1.000 ankyrin repeat, SAM and basic leucine zipper domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-988]
50. si:dkey-4c15.6 si:dkey-4c15.6 6 1 - - - - - - - - 1.000
51. PDE1A ENSDARG00000060875 0 1 - - - - - - - - 1.000 phosphodiesterase 1A, calmodulin-dependent [Source:ZFIN;Acc:ZDB-GENE-090831-2]
52. BX323882.1 ENSDARG00000101656 2 1 - - - - - - - - 1.000 butyrophilin subfamily 2 member A2-like [Source:NCBI gene;Acc:563995]
53. crhb ENSDARG00000027657 9 1 - - - - 1.000 - - - - corticotropin releasing hormone b [Source:ZFIN;Acc:ZDB-GENE-041114-75]
54. si:dkeyp-46h3.3 ENSDARG00000092887 11 1 - - - - 1.000 - - - - si:dkeyp-46h3.3 [Source:ZFIN;Acc:ZDB-GENE-060503-748]
55. ephb2a ENSDARG00000037373, ENSDARG00000114174 104 1 1.000 - - - - - - - - eph receptor B2a [Source:ZFIN;Acc:ZDB-GENE-070713-2]
56. stk32a ENSDARG00000079499 17 1 1.000 - - - - - - - - serine/threonine kinase 32A [Source:ZFIN;Acc:ZDB-GENE-091204-271]
57. IMPG2 IMPG2 1 1 1.000 - - - - - - - -
58. si:dkey-13n23.3 ENSDARG00000070465, ENSDARG00000102714 85 1 1.000 - - - - - - - - si:dkey-13n23.3 [Source:ZFIN;Acc:ZDB-GENE-120214-42]
59. CR382372.1 ENSDARG00000096684 2 1 1.000 - - - - - - - - si:dkeyp-122d12.1 [Source:NCBI gene;Acc:101885973]
60. PHF1 ENSDARG00000057439 1 1 - - - - - - - - 1.000 PHD finger protein 1 [Source:ZFIN;Acc:ZDB-GENE-100922-277]
61. si:ch211-42i6.2 ENSDARG00000086130 0 1 - - - - 1.000 - - - - si:ch211-42i6.2 [Source:ZFIN;Acc:ZDB-GENE-110913-9]
62. TTC40 TTC40 1 1 - - - - 1.000 - - - -
63. CABZ01073071.2 CABZ01073071.2 0 1 - - - - 1.000 - - - -
64. WNK3 WNK3 36 1 1.000 - - - - - - - -
65. nitr2a ENSDARG00000043398, ENSDARG00000068018 1 1 - - - - - - - - 1.000 novel immune-type receptor 2a [Source:ZFIN;Acc:ZDB-GENE-020225-28]
66. anks4b ENSDARG00000036846 8 1 - - - - 1.000 - - - - ankyrin repeat and sterile alpha motif domain containing 4B [Source:ZFIN;Acc:ZDB-GENE-040704-29]
67. si:dkey-43k4.4 si:dkey-43k4.4 4 1 1.000 - - - - - - - -
68. fancm ENSDARG00000103933 1 1 - - - - 1.000 - - - - FA complementation group M [Source:ZFIN;Acc:ZDB-GENE-090929-1]
69. si:dkeyp-107f9.4 ENSDARG00000104468 11 1 1.000 - - - - - - - - si:dkeyp-107f9.4 [Source:ZFIN;Acc:ZDB-GENE-120709-91]
70. si:dkey-65b12.13 si:dkey-65b12.13 7 1 - - - 1.000 - - - - -
71. WDR6 ENSDARG00000078571 28 1 1.000 - - - - - - - - WD repeat domain 6 [Source:ZFIN;Acc:ZDB-GENE-081104-368]
72. agt ENSDARG00000016412 17 1 - - - - 1.000 - - - - angiotensinogen [Source:ZFIN;Acc:ZDB-GENE-030131-1205]
73. BX119910.8 BX119910.8 6 1 1.000 - - - - - - - -
74. si:ch211-225h9.2 si:ch211-225h9.2 16 1 1.000 - - - - - - - -
75. BX088718.4 BX088718.4 0 1 - - - - - - - - 1.000
76. si:dkey-166k12.1 ENSDARG00000054690 0 1 - - - - - - - - 1.000 si:dkey-166k12.1 [Source:ZFIN;Acc:ZDB-GENE-120215-78]
77. v2ra17 ENSDARG00000056180 0 1 - - - - 1.000 - - - - vomeronasal 2 receptor, a17 [Source:ZFIN;Acc:ZDB-GENE-050419-130]
78. gzmk ENSDARG00000028780 1 1 - - - - 1.000 - - - - granzyme K [Source:ZFIN;Acc:ZDB-GENE-091204-352]
79. si:ch211-113a14.14_3 si:ch211-113a14.14_3 21 1 - - - - - - - - 1.000
80. btbd3b ENSDARG00000087517 107 1 1.000 - - - - - - - - BTB (POZ) domain containing 3b [Source:ZFIN;Acc:ZDB-GENE-041210-282]
81. svopa ENSDARG00000056833 14 1 - - - - 1.000 - - - - SV2 related protein a [Source:ZFIN;Acc:ZDB-GENE-060526-336]
82. AL845295.2 ENSDARG00000096472 0 1 - - - - 1.000 - - - -
83. PIAS1 PIAS1 13 1 - - - - - - - - 1.000
84. si:dkey-40j3.3 ENSDARG00000103597 5 1 1.000 - - - - - - - - si:dkey-40j3.3 [Source:ZFIN;Acc:ZDB-GENE-110913-109]
85. gria2b ENSDARG00000052765 188 1 1.000 - - - - - - - - glutamate receptor, ionotropic, AMPA 2b [Source:ZFIN;Acc:ZDB-GENE-020125-4]
86. CU570781.1 ENSDARG00000094656 49 1 1.000 - - - - - - - -
87. DTWD2 ENSDARG00000101873 1 1 - - - - 1.000 - - - - DTW domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-120215-183]
88. KHNYN ENSDARG00000092488 10 1 1.000 - - - - - - - - KH and NYN domain containing [Source:ZFIN;Acc:ZDB-GENE-141215-64]
89. rhol ENSDARG00000070666 0 1 - - - - 1.000 - - - - rhodopsin, like [Source:ZFIN;Acc:ZDB-GENE-070424-6]
90. BX004964.1 ENSDARG00000097134 1 1 - - - - - - - - 1.000
91. CABZ01090951.1 CABZ01090951.1 78 1 1.000 - - - - - - - -
92. WASF1 ENSDARG00000060349 1 1 - - - - 1.000 - - - - WAS protein family, member 1 [Source:ZFIN;Acc:ZDB-GENE-070705-555]
93. gpr153 ENSDARG00000087601 0 1 - - - - - - - - 1.000 G protein-coupled receptor 153 [Source:ZFIN;Acc:ZDB-GENE-050823-7]
94. rsph4a ENSDARG00000067606 132 1 1.000 - - - - - - - - radial spoke head component 4A [Source:ZFIN;Acc:ZDB-GENE-030131-7437]
95. CABZ01044085.1 CABZ01044085.1 3 1 - - - - - - - - 1.000
96. 5S_rRNA_30 5S_rRNA_30 0 1 - - - - 1.000 - - - -
97. si:ch211-229l10.10 si:ch211-229l10.10 8 1 - - - - - - - - 1.000
98. MYO7B MYO7B 8 1 - - - - 1.000 - - - -
99. OXLD1 8 1 1.000 - - - - - - - - oxidoreductase-like domain containing 1, transcript variant X1
100. si:dkey-209n16.2 ENSDARG00000095914 27 1 - - - - - - - - 1.000 si:dkey-209n16.2 [Source:ZFIN;Acc:ZDB-GENE-110408-44]

There are 595 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA