Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:rp71-18l21.1

Gene Name Gene ID Reads Annotation
si:rp71-18l21.1 si:rp71-18l21.1 2










Genes with expression patterns similar to si:rp71-18l21.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:rp71-18l21.1 si:rp71-18l21.1 2 4 1.000 - - 1.000 1.000 - - - 1.000
2. CABZ01117474.1 CABZ01117474.1 2 2 1.000 - - - 1.000 - - - -
3. PTCHD2 PTCHD2 2 2 1.000 - - - 1.000 - - - -
4. ccdc14 ENSDARG00000098734 3 2 - - - - 1.000 - - - 1.000 coiled-coil domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-120215-134]
5. PDE1C PDE1C 1 2 1.000 - - - 1.000 - - - -
6. CACNA2D1_1 ENSDARG00000073752 2 2 1.000 - - - - - - - 1.000 calcium voltage-gated channel auxiliary subunit alpha2delta 1 [Source:HGNC Symbol;Acc:HGNC:1399]
7. si:dkey-111i23.1 ENSDARG00000094811 1 1.874 - - - 0.874 1.000 - - - - si:dkey-111i23.1 [Source:ZFIN;Acc:ZDB-GENE-070912-351]
8. ptger2a ENSDARG00000011434 6 1.874 - - - 0.874 1.000 - - - - prostaglandin E receptor 2a (subtype EP2) [Source:ZFIN;Acc:ZDB-GENE-040426-1321]
9. rhpn1 ENSDARG00000052454 3 1.84 - - - 0.840 1.000 - - - - rhophilin, Rho GTPase binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-081031-79]
10. si:dkeyp-35f12.3 si:dkeyp-35f12.3 3 1.764 0.764 - - - 1.000 - - - -
11. si:ch211-117m20.4 ENSDARG00000094286 7 1.761 1.000 - - - 0.761 - - - - si:ch211-117m20.4 [Source:ZFIN;Acc:ZDB-GENE-060526-20]
12. si:ch211-197e7.8 si:ch211-197e7.8 4 1.761 - - - 1.000 0.761 - - - -
13. dnajc5b ENSDARG00000058147 6 1.701 - - - 0.701 1.000 - - - - DnaJ (Hsp40) homolog, subfamily C, member 5 beta [Source:ZFIN;Acc:ZDB-GENE-050413-1]
14. otomp ENSDARG00000040306 682 1.602 - - - 0.800 0.802 - - - - otolith matrix protein [Source:ZFIN;Acc:ZDB-GENE-040709-1]
15. gsc ENSDARG00000059073, ENSDARG00000111184, ENSDARG00000115937 152 1.573 - - - 0.847 0.726 - - - - goosecoid [Source:ZFIN;Acc:ZDB-GENE-980528-2060]
16. BX088718.1 ENSDARG00000101847 3 1 - - - - 1.000 - - - -
17. si:ch211-218d20.10 si:ch211-218d20.10 4 1 1.000 - - - - - - - -
18. si:dkey-76d18.1 si:dkey-76d18.1 0 1 - - - - 1.000 - - - -
19. rsph4a ENSDARG00000067606 132 1 1.000 - - - - - - - - radial spoke head component 4A [Source:ZFIN;Acc:ZDB-GENE-030131-7437]
20. lmx1a ENSDARG00000020354 111 1 1.000 - - - - - - - - LIM homeobox transcription factor 1, alpha [Source:ZFIN;Acc:ZDB-GENE-041014-332]
21. CCDC74B CCDC74B 8 1 - - - - 1.000 - - - -
22. EIF4G3 EIF4G3 24 1 - - - 1.000 - - - - -
23. zgc:113176 ENSDARG00000040487 30 1 - - - - 1.000 - - - - zgc:113176 [Source:ZFIN;Acc:ZDB-GENE-050327-60]
24. guca1d ENSDARG00000044629, ENSDARG00000115722 22 1 1.000 - - - - - - - - guanylate cyclase activator 1d [Source:ZFIN;Acc:ZDB-GENE-040724-231]
25. si:ch211-153j24.3 ENSDARG00000068428 0 1 - - - - 1.000 - - - - si:ch211-153j24.3 [Source:ZFIN;Acc:ZDB-GENE-041014-38]
26. si:ch211-238g23.1 ENSDARG00000055746 23 1 - - - - 1.000 - - - - si:ch211-238g23.1 [Source:ZFIN;Acc:ZDB-GENE-050420-173]
27. dcp2_1 ENSDARG00000104242 74 1 1.000 - - - - - - - - decapping mRNA 2 [Source:ZFIN;Acc:ZDB-GENE-040426-851]
28. serinc2l ENSDARG00000053425 5 1 1.000 - - - - - - - - serine incorporator 2, like [Source:ZFIN;Acc:ZDB-GENE-100921-58]
29. AFAP1L1 AFAP1L1 1 1 - - - - 1.000 - - - -
30. CR352328.3 CR352328.3 9 1 1.000 - - - - - - - -
31. SNORA32 SNORA32 10 1 - - - - - - - - 1.000
32. baiap2b ENSDARG00000103333, ENSDARG00000111085, ENSDARG00000112327, ENSDARG00000113723 30 1 1.000 - - - - - - - - BAI1-associated protein 2b [Source:ZFIN;Acc:ZDB-GENE-100812-7]
33. ydjc ENSDARG00000062655 5 1 1.000 - - - - - - - - YdjC chitooligosaccharide deacetylase homolog [Source:ZFIN;Acc:ZDB-GENE-060526-182]
34. ECT2L 39 1 1.000 - - - - - - - - epithelial cell transforming 2 like, transcript variant X4
35. si:dkey-15h8.14 si:dkey-15h8.14 139 1 1.000 - - - - - - - -
36. FETUB ENSDARG00000053973 4 1 - - - - 1.000 - - - - fetuin B [Source:ZFIN;Acc:ZDB-GENE-050208-4]
37. AL929453.1 ENSDARG00000115950 31 1 1.000 - - - - - - - -
38. kiss1 ENSDARG00000075829 4 1 - - - - 1.000 - - - - KiSS-1 metastasis suppressor [Source:ZFIN;Acc:ZDB-GENE-080128-1]
39. BAI2 BAI2 0 1 - - - - 1.000 - - - -
40. ntng1a ENSDARG00000014973 23 1 1.000 - - - - - - - - netrin g1a [Source:ZFIN;Acc:ZDB-GENE-091118-13]
41. fubp3 ENSDARG00000086896 21 1 1.000 - - - - - - - - far upstream element (FUSE) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-041121-12]
42. cd22 ENSDARG00000053005 3 1 1.000 - - - - - - - - cd22 molecule [Source:ZFIN;Acc:ZDB-GENE-050522-521]
43. si:ch211-113a14.14_3 si:ch211-113a14.14_3 21 1 - - - - - - - - 1.000
44. ptk2ba ENSDARG00000022841 19 1 1.000 - - - - - - - - protein tyrosine kinase 2 beta, a [Source:ZFIN;Acc:ZDB-GENE-080207-1]
45. si:dkey-94e7.2 ENSDARG00000068474 14 1 - - - - 1.000 - - - - si:dkey-94e7.2 [Source:ZFIN;Acc:ZDB-GENE-070912-611]
46. gzmk ENSDARG00000028780 1 1 - - - - 1.000 - - - - granzyme K [Source:ZFIN;Acc:ZDB-GENE-091204-352]
47. si:ch211-30g3.4 si:ch211-30g3.4 3 1 - - - - - - - - 1.000
48. si:dkey-6a5.3 ENSDARG00000094001 0 1 - - - - 1.000 - - - - si:dkey-6a5.3 [Source:ZFIN;Acc:ZDB-GENE-041210-128]
49. c6ast3 ENSDARG00000024503 2 1 - - - - 1.000 - - - - six-cysteine containing astacin protease 3 [Source:ZFIN;Acc:ZDB-GENE-050320-99]
50. plxnd1 ENSDARG00000086057 2 1 - - - - - - - - 1.000 plexin D1 [Source:ZFIN;Acc:ZDB-GENE-040426-1828]
51. si:ch211-229l10.10 si:ch211-229l10.10 8 1 - - - - - - - - 1.000
52. cldn15lb ENSDARG00000100844 46 1 1.000 - - - - - - - - claudin 15-like b [Source:ZFIN;Acc:ZDB-GENE-040718-145]
53. ZNF337_7 ZNF337_7 198 1 1.000 - - - - - - - -
54. tbkbp1 ENSDARG00000061473 24 1 1.000 - - - - - - - - TBK1 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-100203-1]
55. helq ENSDARG00000079818 133 1 1.000 - - - - - - - - helicase, POLQ like [Source:ZFIN;Acc:ZDB-GENE-060503-421]
56. prf1.8 1 1 1.000 - - - - - - - - perforin 1.8
57. kcnh3 ENSDARG00000069560 4 1 - - - - - - - - 1.000 potassium voltage-gated channel, subfamily H (eag-related), member 3 [Source:ZFIN;Acc:ZDB-GENE-070912-23]
58. 5S_rRNA_30 5S_rRNA_30 0 1 - - - - 1.000 - - - -
59. EMB ENSDARG00000059485 35 1 1.000 - - - - - - - - embigin [Source:ZFIN;Acc:ZDB-GENE-070705-158]
60. BX119910.2 BX119910.2 2 1 - - - - - - - - 1.000
61. dusp19 dusp19 0 1 - - - - 1.000 - - - -
62. gpr153 ENSDARG00000087601 0 1 - - - - - - - - 1.000 G protein-coupled receptor 153 [Source:ZFIN;Acc:ZDB-GENE-050823-7]
63. CT573264.4 CT573264.4 2 1 - - - - - - - - 1.000
64. NPDC1 NPDC1 126 1 1.000 - - - - - - - -
65. BX897720.4 BX897720.4 0 1 - - - - 1.000 - - - -
66. cabp5b ENSDARG00000028485, ENSDARG00000110087 1 1 - - - - - - - - 1.000 calcium binding protein 5b [Source:ZFIN;Acc:ZDB-GENE-050522-146]
67. BX005356.2 BX005356.2 2 1 - - - - 1.000 - - - -
68. si:dkey-20j3.4 si:dkey-20j3.4 4 1 - - - - 1.000 - - - -
69. nfixb ENSDARG00000061836 7 1 1.000 - - - - - - - - nuclear factor I/Xb [Source:ZFIN;Acc:ZDB-GENE-060421-5000]
70. SEC14L5 SEC14L5 1 1 - - - - - - - - 1.000
71. PLXNA1 PLXNA1 2 1 1.000 - - - - - - - -
72. zgc:174642_3 zgc:174642_3 8 1 - - - - - - - - 1.000
73. rimbp2 ENSDARG00000001154, ENSDARG00000093752 1 1 1.000 - - - - - - - - RIMS binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040724-96]
74. si:ch73-280o22.2 ENSDARG00000077072 67 1 1.000 - - - - - - - - si:ch73-280o22.2 [Source:ZFIN;Acc:ZDB-GENE-141216-272]
75. grpr ENSDARG00000056620 66 1 1.000 - - - - - - - - gastrin-releasing peptide receptor [Source:ZFIN;Acc:ZDB-GENE-081015-4]
76. prkg2 ENSDARG00000054741, ENSDARG00000116321 4 1 1.000 - - - - - - - - protein kinase cGMP-dependent 2 [Source:ZFIN;Acc:ZDB-GENE-060531-80]
77. zgc:114081 ENSDARG00000057899, ENSDARG00000113048 5 1 - - - - - - - - 1.000 zgc:114081 [Source:ZFIN;Acc:ZDB-GENE-050913-78]
78. si:ch211-163b2.4 ENSDARG00000094890 140 1 1.000 - - - - - - - - si:ch211-163b2.4 [Source:ZFIN;Acc:ZDB-GENE-081104-502]
79. SH3RF3 ENSDARG00000102334 1 1 1.000 - - - - - - - - SH3 domain containing ring finger 3 [Source:HGNC Symbol;Acc:HGNC:24699]
80. got1 ENSDARG00000039093 1 1 1.000 - - - - - - - - glutamic-oxaloacetic transaminase 1, soluble [Source:ZFIN;Acc:ZDB-GENE-040426-2003]
81. zgc:114037_2 11 1 1.000 - - - - - - - - zgc:114037
82. JAKMIP3 ENSDARG00000100708 56 1 - - - - - - - - 1.000 Janus kinase and microtubule interacting protein 3 [Source:ZFIN;Acc:ZDB-GENE-100914-6]
83. aldh2.2_1 ENSDARG00000028087 279 1 1.000 - - - - - - - - aldehyde dehydrogenase 2 family member, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-030326-5]
84. dnah7 ENSDARG00000060165 21 1 1.000 - - - - - - - - dynein, axonemal, heavy chain 7 [Source:ZFIN;Acc:ZDB-GENE-070912-282]
85. XYLT2 ENSDARG00000059557 1 1 - - - - 1.000 - - - - xylosyltransferase II [Source:ZFIN;Acc:ZDB-GENE-081022-125]
86. Telomerase-vert Telomerase-vert 8 1 1.000 - - - - - - - -
87. AL845295.2 ENSDARG00000096472 0 1 - - - - 1.000 - - - -
88. si:rp71-36a1.5 ENSDARG00000077252, ENSDARG00000090882 2 1 - - - - - - - - 1.000 si:rp71-36a1.5 [Source:ZFIN;Acc:ZDB-GENE-091204-428]
89. CR382372.2 CR382372.2 136 1 1.000 - - - - - - - -
90. CCSAP CCSAP 147 1 1.000 - - - - - - - -
91. SNORD15_1 SNORD15_1 1 1 - - - - 1.000 - - - -
92. si:dkey-65b12.13 si:dkey-65b12.13 7 1 - - - 1.000 - - - - -
93. BX469910.2 ENSDARG00000096127 6 1 - - - - 1.000 - - - -
94. PLCXD2 ENSDARG00000058200 8 1 - - - - - - - - 1.000 phosphatidylinositol-specific phospholipase C, X domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-091204-217]
95. tbc1d9 ENSDARG00000043627, ENSDARG00000059900 3 1 1.000 - - - - - - - - TBC1 domain family, member 9 (with GRAM domain) [Source:ZFIN;Acc:ZDB-GENE-060810-33]
96. nrn1la ENSDARG00000069368, ENSDARG00000112044, ENSDARG00000112869 16 1 - - - - 1.000 - - - - neuritin 1-like a [Source:NCBI gene;Acc:100004307]
97. si:ch211-251p5.3 si:ch211-251p5.3 39 1 - - - - 1.000 - - - -
98. isl1l ENSDARG00000021055, ENSDARG00000110204 4 1 - - - - - - - - 1.000 islet1, like [Source:ZFIN;Acc:ZDB-GENE-040624-1]
99. CDH7 16 1 1.000 - - - - - - - - cadherin 7, type 2, transcript variant X1
100. DUSP19 DUSP19 10 1 1.000 - - - - - - - -

There are 595 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA