Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkeyp-87e3.1

Gene Name Gene ID Reads Annotation
si:dkeyp-87e3.1 si:dkeyp-87e3.1 245










Genes with expression patterns similar to si:dkeyp-87e3.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkeyp-87e3.1 si:dkeyp-87e3.1 245 8 1.000 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000
2. MSS51 ENSDARG00000075463 428 2.252 0.778 0.724 - - - - 0.750 - - MSS51 mitochondrial translational activator [Source:ZFIN;Acc:ZDB-GENE-130530-775]
3. hspb7 ENSDARG00000104441 1417 1.639 - 0.771 - - - - 0.868 - - heat shock protein family, member 7 (cardiovascular) [Source:ZFIN;Acc:ZDB-GENE-041010-136]
4. CU467854.2 CU467854.2 298 1.561 - 0.786 - - - - 0.775 - -
5. si:dkey-65j6.2 ENSDARG00000103586 533 1.537 0.709 - - - - - 0.828 - - si:dkey-65j6.2 [Source:ZFIN;Acc:ZDB-GENE-090313-319]
6. hsc70 ENSDARG00000012381 961 1.529 - 0.768 - - - - 0.761 - - heat shock cognate 70 [Source:ZFIN;Acc:ZDB-GENE-040426-1221]
7. rapsn ENSDARG00000041133, ENSDARG00000111358 1416 1.512 0.713 - - - - - 0.799 - - receptor-associated protein of the synapse, 43kD [Source:ZFIN;Acc:ZDB-GENE-030313-1]
8. six2b ENSDARG00000054878 567 1.512 - 0.760 - - - - 0.752 - - SIX homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-080723-23]
9. itpr1a ENSDARG00000014655, ENSDARG00000117119 151 1.492 - 0.745 - - - 0.747 - - - inositol 1,4,5-trisphosphate receptor, type 1a [Source:ZFIN;Acc:ZDB-GENE-070604-3]
10. six4a ENSDARG00000004695 413 1.492 0.714 0.778 - - - - - - - SIX homeobox 4a [Source:ZFIN;Acc:ZDB-GENE-010201-2]
11. cpt1b ENSDARG00000058285 288 1.485 - - - - - 0.776 0.709 - - carnitine palmitoyltransferase 1B (muscle) [Source:ZFIN;Acc:ZDB-GENE-041010-9]
12. GTPBP8 ENSDARG00000075033 231 1.46 - 0.716 - - - - 0.744 - - GTP binding protein 8 (putative) [Source:HGNC Symbol;Acc:HGNC:25007]
13. asb2a asb2a 845 1.456 - 0.738 - - - - 0.718 - -
14. ERBB4_1 ERBB4_1 1064 1.434 0.711 - - - - - 0.723 - -
15. aass ENSDARG00000051816 3795 1.424 0.719 0.705 - - - - - - - aminoadipate-semialdehyde synthase [Source:ZFIN;Acc:ZDB-GENE-061220-8]
16. si:ch211-85n16.3 ENSDARG00000096346 1095 0.936 - 0.936 - - - - - - - si:ch211-85n16.3 [Source:ZFIN;Acc:ZDB-GENE-120215-137]
17. mapre3b ENSDARG00000102878 362 0.931 - 0.931 - - - - - - - microtubule-associated protein, RP/EB family, member 3b [Source:ZFIN;Acc:ZDB-GENE-040704-6]
18. pdlim3b ENSDARG00000014248, ENSDARG00000111275 708 0.922 - - - - - - 0.922 - - PDZ and LIM domain 3b [Source:ZFIN;Acc:ZDB-GENE-060130-104]
19. ugp2a ENSDARG00000005578 2835 0.918 - - - - - - 0.918 - - UDP-glucose pyrophosphorylase 2a [Source:ZFIN;Acc:ZDB-GENE-090311-46]
20. slc6a8 ENSDARG00000043646 1114 0.917 - - - - - - 0.917 - - solute carrier family 6 (neurotransmitter transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-071024-2]
21. sept8b ENSDARG00000014233 223 0.915 - - - - - - 0.915 - - septin 8b [Source:ZFIN;Acc:ZDB-GENE-070424-3]
22. YRDC ENSDARG00000041428 221 0.898 - - - - - - 0.898 - - yrdC N(6)-threonylcarbamoyltransferase domain containing [Source:ZFIN;Acc:ZDB-GENE-070410-65]
23. me1 ENSDARG00000053215 107 0.898 - - - - - - 0.898 - - malic enzyme 1, NADP(+)-dependent, cytosolic [Source:ZFIN;Acc:ZDB-GENE-061013-438]
24. hdac9b ENSDARG00000056642 1148 0.89 - - - - - - 0.890 - - histone deacetylase 9b [Source:ZFIN;Acc:ZDB-GENE-040109-7]
25. TOP1 ENSDARG00000086775 48 0.883 0.883 - - - - - - - - DNA topoisomerase I [Source:ZFIN;Acc:ZDB-GENE-030131-5390]
26. zgc:153662 zgc:153662 4604 0.882 - - - - - - 0.882 - -
27. sms ENSDARG00000008155 1192 0.879 - - - - - - 0.879 - - spermine synthase [Source:ZFIN;Acc:ZDB-GENE-040625-150]
28. PLEKHA4 PLEKHA4 86 0.873 - - - - - - 0.873 - -
29. myoz2a ENSDARG00000012311 1373 0.871 - - - - - - 0.871 - - myozenin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1880]
30. bcl6a ENSDARG00000070864, ENSDARG00000111395, ENSDARG00000112502, ENSDARG00000116260 657 0.871 - - - - - - 0.871 - - B-cell CLL/lymphoma 6a (zinc finger protein 51) [Source:ZFIN;Acc:ZDB-GENE-040426-1696]
31. cplx4c ENSDARG00000094889 253 0.866 - 0.866 - - - - - - - complexin 4c [Source:ZFIN;Acc:ZDB-GENE-101018-1]
32. alpk3a ENSDARG00000078989 1992 0.864 - - - - - - 0.864 - - alpha-kinase 3a [Source:ZFIN;Acc:ZDB-GENE-050419-48]
33. si:ch211-282k23.2 ENSDARG00000093591 447 0.863 - 0.863 - - - - - - - si:ch211-282k23.2 [Source:ZFIN;Acc:ZDB-GENE-050420-314]
34. tamm41 ENSDARG00000100157 1116 0.863 - - - - - - 0.863 - - TAM41 mitochondrial translocator assembly and maintenance homolog [Source:ZFIN;Acc:ZDB-GENE-051030-99]
35. myog ENSDARG00000009438 2368 0.86 - 0.860 - - - - - - - myogenin [Source:ZFIN;Acc:ZDB-GENE-980526-265]
36. tnnt2e ENSDARG00000045822, ENSDARG00000109924 3288 0.86 - - - - - - 0.860 - - troponin T2e, cardiac [Source:ZFIN;Acc:ZDB-GENE-041210-27]
37. lmo2 ENSDARG00000095019 1098 0.859 - 0.859 - - - - - - - LIM domain only 2 (rhombotin-like 1) [Source:ZFIN;Acc:ZDB-GENE-980526-419]
38. prpf18 ENSDARG00000058306, ENSDARG00000113879 512 0.854 - 0.854 - - - - - - - PRP18 pre-mRNA processing factor 18 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040704-45]
39. meox2b ENSDARG00000061818, ENSDARG00000116206 62 0.854 - - - - - - 0.854 - - mesenchyme homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-060503-853]
40. duox ENSDARG00000062632 1406 0.853 - 0.853 - - - - - - - dual oxidase [Source:ZFIN;Acc:ZDB-GENE-091117-14]
41. dnajc18 ENSDARG00000056005 8084 0.852 - - - - - - 0.852 - - DnaJ (Hsp40) homolog, subfamily C, member 18 [Source:ZFIN;Acc:ZDB-GENE-030131-8019]
42. dlgap1b ENSDARG00000037415 658 0.852 - 0.852 - - - - - - - discs, large (Drosophila) homolog-associated protein 1b [Source:ZFIN;Acc:ZDB-GENE-091116-98]
43. mtif2 ENSDARG00000063213, ENSDARG00000113856 377 0.851 - - - - - - 0.851 - - mitochondrial translational initiation factor 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1092]
44. krr1 ENSDARG00000011246 1624 0.85 - 0.850 - - - - - - - KRR1, small subunit (SSU) processome component, homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-060623-10]
45. usp28 ENSDARG00000008880 1850 0.85 - - - - - - 0.850 - - ubiquitin specific peptidase 28 [Source:ZFIN;Acc:ZDB-GENE-041008-142]
46. six1b ENSDARG00000026473 1908 0.849 - - - - - - 0.849 - - SIX homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2308]
47. runx1t1 ENSDARG00000003680 633 0.846 - 0.846 - - - - - - - runt-related transcription factor 1; translocated to, 1 (cyclin D-related) [Source:ZFIN;Acc:ZDB-GENE-060929-164]
48. si:ch211-89o9.4 ENSDARG00000093237 153 0.846 - - - - - - 0.846 - - si:ch211-89o9.4 [Source:ZFIN;Acc:ZDB-GENE-090313-134]
49. rtn2b ENSDARG00000057027 1391 0.844 - - - - - - 0.844 - - reticulon 2b [Source:ZFIN;Acc:ZDB-GENE-060331-95]
50. phf16 phf16 1116 0.844 - - - - - 0.844 - - -
51. si:ch211-51c14.1 ENSDARG00000054645, ENSDARG00000110953 2434 0.844 - - - - - - 0.844 - - si:ch211-51c14.1 [Source:ZFIN;Acc:ZDB-GENE-120215-48]
52. chrnd ENSDARG00000019342 2728 0.842 - - - - - - 0.842 - - cholinergic receptor, nicotinic, delta (muscle) [Source:ZFIN;Acc:ZDB-GENE-030131-6665]
53. ALDH1L2 ENSDARG00000070230 2550 0.84 - - - - - - 0.840 - - aldehyde dehydrogenase 1 family, member L2 [Source:ZFIN;Acc:ZDB-GENE-100426-6]
54. jph1a ENSDARG00000058603 2852 0.839 - - - - - - 0.839 - - junctophilin 1a [Source:ZFIN;Acc:ZDB-GENE-040724-233]
55. CU633479.5 ENSDARG00000114818 1815 0.839 - - - - - - 0.839 - -
56. msrb3 ENSDARG00000045658 988 0.838 - - - - - - 0.838 - - methionine sulfoxide reductase B3 [Source:ZFIN;Acc:ZDB-GENE-040625-74]
57. casq1b ENSDARG00000018105 2643 0.837 - - - - - - 0.837 - - calsequestrin 1b [Source:ZFIN;Acc:ZDB-GENE-060929-1070]
58. abrab ENSDARG00000033854 380 0.836 - - - - - - 0.836 - - actin binding Rho activating protein b [Source:ZFIN;Acc:ZDB-GENE-040822-7]
59. pmp22b ENSDARG00000060457 20406 0.834 - - - - - - 0.834 - - peripheral myelin protein 22b [Source:ZFIN;Acc:ZDB-GENE-060421-4337]
60. si:ch211-243j20.2 ENSDARG00000033916 347 0.833 - 0.833 - - - - - - - si:ch211-243j20.2 [Source:ZFIN;Acc:ZDB-GENE-041014-345]
61. limch1a ENSDARG00000074275 2981 0.833 - - - - - - 0.833 - - LIM and calponin homology domains 1a [Source:ZFIN;Acc:ZDB-GENE-090312-153]
62. csrnp1a ENSDARG00000031426 225 0.832 - - - - - - 0.832 - - cysteine-serine-rich nuclear protein 1a [Source:ZFIN;Acc:ZDB-GENE-070912-475]
63. vgll2b ENSDARG00000053773 444 0.832 - - - - - - 0.832 - - vestigial-like family member 2b [Source:ZFIN;Acc:ZDB-GENE-050809-113]
64. tnnt2d ENSDARG00000002988 7590 0.832 - - - - - - 0.832 - - troponin T2d, cardiac [Source:ZFIN;Acc:ZDB-GENE-050626-97]
65. TMPO TMPO 3264 0.831 - - - - - - 0.831 - -
66. pbxip1a ENSDARG00000071015 4960 0.831 - - - - - - 0.831 - - pre-B-cell leukemia homeobox interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-060503-871]
67. mdh1b ENSDARG00000018008 3196 0.831 - - - - - - 0.831 - - malate dehydrogenase 1B, NAD (soluble) [Source:ZFIN;Acc:ZDB-GENE-060929-384]
68. DNAJA4 ENSDARG00000051762 5657 0.83 - - - - - - 0.830 - - DnaJ heat shock protein family (Hsp40) member A4 [Source:HGNC Symbol;Acc:HGNC:14885]
69. SLC22A23_1 SLC22A23_1 308 0.83 - 0.830 - - - - - - -
70. zgc:174895 ENSDARG00000079416, ENSDARG00000113559 451 0.83 - - - - - - 0.830 - - zgc:174895 [Source:ZFIN;Acc:ZDB-GENE-070928-41]
71. PTGES3L PTGES3L 4801 0.829 - - - - - - 0.829 - -
72. kifap3b ENSDARG00000006862 613 0.829 - 0.829 - - - - - - - kinesin-associated protein 3b [Source:ZFIN;Acc:ZDB-GENE-030131-2219]
73. jph2 ENSDARG00000028625 6706 0.828 - - - - - - 0.828 - - junctophilin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9848]
74. NMNAT3 ENSDARG00000077034 126 0.828 - 0.828 - - - - - - - nicotinamide nucleotide adenylyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:20989]
75. pip5k1ba ENSDARG00000044295 57 0.828 - 0.828 - - - - - - - phosphatidylinositol-4-phosphate 5-kinase, type I, beta a [Source:ZFIN;Acc:ZDB-GENE-041010-81]
76. mmp23bb ENSDARG00000009825 133 0.827 - - - - - - 0.827 - - matrix metallopeptidase 23bb [Source:ZFIN;Acc:ZDB-GENE-050417-448]
77. smyd1a ENSDARG00000009280 1503 0.827 - - - - - - 0.827 - - SET and MYND domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9825]
78. rbfox1l ENSDARG00000021184, ENSDARG00000111700 26249 0.826 - - - - - - 0.826 - - RNA binding fox-1 homolog 1, like [Source:ZFIN;Acc:ZDB-GENE-040923-2]
79. ATP5J_2 ATP5J_2 2381 0.826 - - - - - - 0.826 - -
80. rps6kal ENSDARG00000037574, ENSDARG00000115099 294 0.825 - - - - - - 0.825 - - ribosomal protein S6 kinase a, like [Source:ZFIN;Acc:ZDB-GENE-030131-9616]
81. obsl1b ENSDARG00000077388 2511 0.825 - - - - - - 0.825 - - obscurin-like 1b [Source:ZFIN;Acc:ZDB-GENE-050809-29]
82. EHBP1L1 EHBP1L1 2500 0.824 - - - - - - 0.824 - -
83. myf6 ENSDARG00000029830 1911 0.824 - - - - - - 0.824 - - myogenic factor 6 [Source:ZFIN;Acc:ZDB-GENE-040309-2]
84. ATP5J 343 0.824 - - - - - - 0.824 - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6, transcript variant X2
85. COL22A1 COL22A1 4473 0.824 - - - - - - 0.824 - -
86. exd2 ENSDARG00000016117 342 0.823 - 0.823 - - - - - - - exonuclease 3'-5' domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6387]
87. fam173b ENSDARG00000033451 513 0.823 - - - - - - 0.823 - - family with sequence similarity 173, member B [Source:ZFIN;Acc:ZDB-GENE-041114-90]
88. cacng6b ENSDARG00000046079 258 0.822 - - - - - - 0.822 - - calcium channel, voltage-dependent, gamma subunit 6b [Source:ZFIN;Acc:ZDB-GENE-100922-272]
89. atp1a2a ENSDARG00000010472, ENSDARG00000111818, ENSDARG00000115733 6341 0.821 - - - - - - 0.821 - - ATPase Na+/K+ transporting subunit alpha 2 [Source:ZFIN;Acc:ZDB-GENE-001212-6]
90. tnnt2c ENSDARG00000032242 28801 0.821 - - - - - - 0.821 - - troponin T2c, cardiac [Source:ZFIN;Acc:ZDB-GENE-030520-1]
91. FAM210A FAM210A 437 0.82 - - - - - - 0.820 - -
92. THUMPD1 ENSDARG00000100264 966 0.82 - 0.820 - - - - - - - THUMP domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1805]
93. klhl41b ENSDARG00000006757 10762 0.819 - - - - - - 0.819 - - kelch-like family member 41b [Source:ZFIN;Acc:ZDB-GENE-030131-9875]
94. cspg4 ENSDARG00000078227 1084 0.819 - - - - - - 0.819 - - chondroitin sulfate proteoglycan 4 [Source:ZFIN;Acc:ZDB-GENE-050519-1]
95. efemp2a ENSDARG00000094324 39261 0.817 - - - - - - 0.817 - - EGF containing fibulin extracellular matrix protein 2a [Source:ZFIN;Acc:ZDB-GENE-041212-8]
96. dchs1b ENSDARG00000079850 831 0.817 - 0.817 - - - - - - - dachsous cadherin-related 1b [Source:ZFIN;Acc:ZDB-GENE-050208-41]
97. sgcd ENSDARG00000098573 4980 0.816 - - - - - - 0.816 - - sarcoglycan, delta (dystrophin-associated glycoprotein) [Source:ZFIN;Acc:ZDB-GENE-030131-3684]
98. cxcl12a ENSDARG00000037116 5433 0.815 - - - - - - 0.815 - - chemokine (C-X-C motif) ligand 12a (stromal cell-derived factor 1) [Source:ZFIN;Acc:ZDB-GENE-030318-1]
99. CDK5R1 CDK5R1 562 0.815 0.815 - - - - - - - -
100. C13H10orf71 3489 0.814 - - - - - - 0.814 - - chromosome 13 C10orf71 homolog

There are 564 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA