Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkeyp-68a7.5

Gene Name Gene ID Reads Annotation
si:dkeyp-68a7.5 si:dkeyp-68a7.5 6










Genes with expression patterns similar to si:dkeyp-68a7.5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkeyp-68a7.5 si:dkeyp-68a7.5 6 5 1.000 - 1.000 1.000 1.000 - - - 1.000
2. U4_1 U4_1 2 2 - - 1.000 - - - - - 1.000
3. nog3 ENSDARG00000053528, ENSDARG00000116141, ENSDARG00000116361 1 2 - - 1.000 - - - - - 1.000 noggin 3 [Source:ZFIN;Acc:ZDB-GENE-990714-8]
4. sh2d4b sh2d4b 1 2 - - 1.000 - - - - - 1.000
5. STRC ENSDARG00000105391 10 1.97 - - 1.000 - - - - - 0.970 stereocilin [Source:ZFIN;Acc:ZDB-GENE-160114-58]
6. CR631122.1 ENSDARG00000044534 8 1.94 - - - - 0.940 - - - 1.000 protein RD3-like [Source:NCBI gene;Acc:100149591]
7. slc17a8 ENSDARG00000057728, ENSDARG00000109791 8 1.889 - - 0.889 - - - - - 1.000 solute carrier family 17 (vesicular glutamate transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-060503-416]
8. chrna4 chrna4 3 1.867 - - 1.000 - 0.867 - - - -
9. prdm11 ENSDARG00000074468 2 1.859 - - - - 0.859 - - - 1.000 PR domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-061221-1]
10. pou4f3 ENSDARG00000006206 8 1.821 - - 1.000 - - - - - 0.821 POU class 4 homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-990415-24]
11. si:dkey-30c15.12 ENSDARG00000058546 12 1.751 - - 0.751 - - - - - 1.000 si:dkey-30c15.12 [Source:ZFIN;Acc:ZDB-GENE-060503-920]
12. nudt13 ENSDARG00000057417, ENSDARG00000115835 46 1.715 0.715 - 1.000 - - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 13 [Source:ZFIN;Acc:ZDB-GENE-040724-60]
13. CR352265.1 ENSDARG00000062758 39 1.695 - - 0.917 - - - - - 0.778
14. traf7 ENSDARG00000060207 20 1.582 - - 0.796 - 0.786 - - - - TNF receptor-associated factor 7 [Source:ZFIN;Acc:ZDB-GENE-070112-2212]
15. ppm1f ENSDARG00000005786, ENSDARG00000109839 25 1.514 - - - - 0.787 - - - 0.727 protein phosphatase, Mg2+/Mn2+ dependent, 1F [Source:ZFIN;Acc:ZDB-GENE-051128-2]
16. pigr ENSDARG00000101890 10 1.481 - - - 0.767 0.714 - - - - polymeric immunoglobulin receptor [Source:ZFIN;Acc:ZDB-GENE-060503-327]
17. plekha7b ENSDARG00000062220, ENSDARG00000110462 11 1 - - 1.000 - - - - - - pleckstrin homology domain containing, family A member 7b [Source:ZFIN;Acc:ZDB-GENE-091014-2]
18. CR855307.2 CR855307.2 1 1 - - 1.000 - - - - - -
19. b3gnt9 ENSDARG00000041616 0 1 - - 1.000 - - - - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9 [Source:ZFIN;Acc:ZDB-GENE-060503-611]
20. CR812472.3 ENSDARG00000109834 0 1 - - - - - - - - 1.000 platelet-derived growth factor beta polypeptide b [Source:NCBI gene;Acc:796490]
21. U1_7 U1_7 0 1 - - 1.000 - - - - - -
22. si:ch73-27e22.2 ENSDARG00000092266 8 1 - - - - - - - - 1.000 si:ch73-27e22.2 [Source:ZFIN;Acc:ZDB-GENE-070705-230]
23. XRCC2 ENSDARG00000013933 15 1 - - - - - - - - 1.000 X-ray repair cross complementing 2 [Source:HGNC Symbol;Acc:HGNC:12829]
24. CABZ01087111.1 CABZ01087111.1 42 1 - - 1.000 - - - - - -
25. tyro3 ENSDARG00000005356 4 1 - - 1.000 - - - - - - TYRO3 protein tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-990714-13]
26. si:dkeyp-34c12.1 ENSDARG00000071083, ENSDARG00000113229 6 1 - - 1.000 - - - - - - si:dkeyp-34c12.1 [Source:ZFIN;Acc:ZDB-GENE-030131-5347]
27. CR356247.1 CR356247.1 2 1 - - 1.000 - - - - - -
28. zgc:162322 zgc:162322 1 1 - - 1.000 - - - - - -
29. ZNF70_7 ZNF70_7 0 1 - - 1.000 - - - - - -
30. SNORA53 SNORA53 10 1 - - 1.000 - - - - - -
31. hsf5 ENSDARG00000104686 9 1 - - 1.000 - - - - - - heat shock transcription factor family member 5 [Source:ZFIN;Acc:ZDB-GENE-070410-42]
32. si:ch211-269m17.1 si:ch211-269m17.1 1 1 - - - - - - - - 1.000
33. ppp4r1 ENSDARG00000101316 1 1 - - - - - - - - 1.000 protein phosphatase 4, regulatory subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040426-753]
34. gabra3 ENSDARG00000090883 0 1 - - 1.000 - - - - - - gamma-aminobutyric acid (GABA) A receptor, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-091204-365]
35. adamtsl2 ENSDARG00000074033 0 1 - - - - - - - - 1.000 ADAMTS-like 2 [Source:ZFIN;Acc:ZDB-GENE-070705-558]
36. si:ch211-202m22.1 ENSDARG00000094491 24 1 - - 1.000 - - - - - - si:ch211-202m22.1 [Source:ZFIN;Acc:ZDB-GENE-060531-31]
37. si:ch211-145h19.2 7 1 - - - - - - - - 1.000 si:ch211-145h19.2
38. SBSPON ENSDARG00000110160 2 1 - - - - - - - - 1.000 somatomedin B and thrombospondin type 1 domain containing [Source:HGNC Symbol;Acc:HGNC:30362]
39. si:ch211-285c6.2 ENSDARG00000079234 1 1 - - 1.000 - - - - - - si:ch211-285c6.2 [Source:ZFIN;Acc:ZDB-GENE-040724-168]
40. si:dkey-211e20.3 si:dkey-211e20.3 1 1 - - 1.000 - - - - - -
41. slc2a11l ENSDARG00000062873 1 1 - - 1.000 - - - - - - solute carrier family 2 (facilitated glucose transporter), member 11-like [Source:ZFIN;Acc:ZDB-GENE-061215-118]
42. tirap ENSDARG00000074371 10 1 - - - - - - - - 1.000 toll-interleukin 1 receptor (TIR) domain containing adaptor protein [Source:ZFIN;Acc:ZDB-GENE-040219-4]
43. csf3r ENSDARG00000045959 4 1 - - 1.000 - - - - - - colony stimulating factor 3 receptor (granulocyte) [Source:ZFIN;Acc:ZDB-GENE-080104-4]
44. CT573468.1 CT573468.1 283 1 - - - - - - - - 1.000
45. SLC4A3 ENSDARG00000104005 2 1 - - 1.000 - - - - - - solute carrier family 4 (anion exchanger), member 3 [Source:ZFIN;Acc:ZDB-GENE-141006-1]
46. rac1l ENSDARG00000054649, ENSDARG00000096549 2 1 - - 1.000 - - - - - - Rac family small GTPase 1, like [Source:ZFIN;Acc:ZDB-GENE-060315-6]
47. gata2b ENSDARG00000009094 16 1 - - 1.000 - - - - - - GATA binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-040718-440]
48. 5S_rRNA_10 5S_rRNA_10 2 1 - - 1.000 - - - - - -
49. sox32 ENSDARG00000100591 2 1 - - 1.000 - - - - - - SRY (sex determining region Y)-box 32 [Source:ZFIN;Acc:ZDB-GENE-011026-1]
50. zgc:174180 ENSDARG00000098677, ENSDARG00000101389 5 1 - - - - - - - - 1.000 zgc:174180 [Source:ZFIN;Acc:ZDB-GENE-080206-1]
51. CABZ01019905.2 CABZ01019905.2 1 1 - - - - - - - - 1.000
52. BX664622.1 ENSDARG00000101754 39 1 - - - - - - - - 1.000
53. FMNL1 FMNL1 7 1 - - - - - - - - 1.000
54. si:ch211-178j18.2 si:ch211-178j18.2 1 1 - - 1.000 - - - - - -
55. CT573264.1 ENSDARG00000110089 0 1 - - - - - - - - 1.000
56. unc5da ENSDARG00000092722 8 1 - - 1.000 - - - - - - unc-5 netrin receptor Da [Source:ZFIN;Acc:ZDB-GENE-080908-2]
57. si:ch211-254p10.3 si:ch211-254p10.3 5 1 - - - - - - - - 1.000
58. WNK4 WNK4 0 1 - - - - - - - - 1.000
59. CMA1_13 CMA1_13 0 1 - - - - - - - - 1.000
60. CABZ01079302.1 ENSDARG00000103230 2 1 - - 1.000 - - - - - -
61. si:dkey-11f4.20 ENSDARG00000100887 38 1 - - 1.000 - - - - - - si:dkey-11f4.20 [Source:ZFIN;Acc:ZDB-GENE-070912-359]
62. CACNA2D1_1 ENSDARG00000073752 2 1 - - 1.000 - - - - - - calcium voltage-gated channel auxiliary subunit alpha2delta 1 [Source:HGNC Symbol;Acc:HGNC:1399]
63. CABZ01012080.1 CABZ01012080.1 10 1 - - 1.000 - - - - - -
64. si:dkey-21o19.6 si:dkey-21o19.6 18 1 - - 1.000 - - - - - -
65. SNORD12_1 SNORD12_1 0 1 - - 1.000 - - - - - -
66. CR388152.1 CR388152.1 7 1 - - - - - - - - 1.000
67. zgc:174642_2 zgc:174642_2 1 1 - - 1.000 - - - - - -
68. KCNJ3_1 KCNJ3_1 30 1 - - 1.000 - - - - - -
69. syne2a_1 0 1 - - 1.000 - - - - - - spectrin repeat containing, nuclear envelope 2a
70. fn3krp ENSDARG00000098208 4 1 - - 1.000 - - - - - - fructosamine 3 kinase related protein [Source:ZFIN;Acc:ZDB-GENE-041010-192]
71. prokr1a ENSDARG00000074182 2 1 - - 1.000 - - - - - - prokineticin receptor 1a [Source:ZFIN;Acc:ZDB-GENE-110411-180]
72. CU468041.1 ENSDARG00000092125 1 1 - - 1.000 - - - - - -
73. mir150 ENSDARG00000081593 4 1 - - 1.000 - - - - - - microRNA 150 [Source:NCBI gene;Acc:100033674]
74. apba1a ENSDARG00000103848 0 1 - - 1.000 - - - - - - amyloid beta (A4) precursor protein-binding, family A, member 1a [Source:ZFIN;Acc:ZDB-GENE-060526-175]
75. hbaa2 ENSDARG00000069735 10 1 - - 1.000 - - - - - - hemoglobin, alpha adult 2 [Source:ZFIN;Acc:ZDB-GENE-081104-38]
76. si:ch211-199g17.8 si:ch211-199g17.8 9 1 - - - - - - - - 1.000
77. abcg2a ENSDARG00000100075 2 1 - - 1.000 - - - - - - ATP-binding cassette, sub-family G (WHITE), member 2a [Source:ZFIN;Acc:ZDB-GENE-050517-35]
78. si:rp71-20i5.5 si:rp71-20i5.5 9 1 - - 1.000 - - - - - -
79. mxd ENSDARG00000023369 8 1 - - 1.000 - - - - - - myxovirus (influenza virus) resistance D [Source:ZFIN;Acc:ZDB-GENE-030721-8]
80. GARNL3 GARNL3 1 1 - - 1.000 - - - - - -
81. INPP5A 1 1 - - 1.000 - - - - - - inositol polyphosphate-5-phosphatase A
82. CABZ01071177.1 CABZ01071177.1 1 1 - - - - - - - - 1.000
83. mgat4a ENSDARG00000063330 3 1 - - - - - - - - 1.000 alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A [Source:ZFIN;Acc:ZDB-GENE-070912-27]
84. CR936371.2 ENSDARG00000117302 2 1 - - - - - - - - 1.000
85. RASAL1 0 1 - - 1.000 - - - - - - RAS protein activator like 1
86. PEG3_14 PEG3_14 2 1 - - 1.000 - - - - - -
87. CR548630.2 CR548630.2 1 1 - - 1.000 - - - - - -
88. CR293498.1 ENSDARG00000097990 4 1 - - - - - - - - 1.000
89. zgc:114037_5 6 1 - - 1.000 - - - - - - zgc:114037
90. zgc:174696 ENSDARG00000110658 67 1 1.000 - - - - - - - - zgc:174696 [Source:ZFIN;Acc:ZDB-GENE-030131-2836]
91. si:dkeyp-46h3.3 ENSDARG00000092887 11 1 - - - - - - - - 1.000 si:dkeyp-46h3.3 [Source:ZFIN;Acc:ZDB-GENE-060503-748]
92. panx3 ENSDARG00000004627 7 1 - - 1.000 - - - - - - pannexin 3 [Source:ZFIN;Acc:ZDB-GENE-091204-114]
93. PEG3_36 PEG3_36 3 1 - - 1.000 - - - - - -
94. CABZ01080229.2 CABZ01080229.2 9 1 1.000 - - - - - - - -
95. si:dkey-14i17.1 si:dkey-14i17.1 1 1 - - 1.000 - - - - - -
96. CABZ01002768.1 ENSDARG00000098901 2 1 - - - - - - - - 1.000
97. si:dkey-240h12.3 ENSDARG00000095458 7 1 - - - - - - - - 1.000 si:dkey-240h12.3 [Source:ZFIN;Acc:ZDB-GENE-070705-405]
98. PSKH2 PSKH2 1 1 - - 1.000 - - - - - -
99. U5_7 U5_7 0 1 - - - - - - - - 1.000
100. CR846080.4 CR846080.4 6 1 - - - - - - - - 1.000

There are 380 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA