Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:dkeyp-53d3.5

Gene Name Gene ID Reads Annotation
si:dkeyp-53d3.5 ENSDARG00000101542 171 si:dkeyp-53d3.5 [Source:ZFIN;Acc:ZDB-GENE-050208-485]










Genes with expression patterns similar to si:dkeyp-53d3.5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkeyp-53d3.5 ENSDARG00000101542 171 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:dkeyp-53d3.5 [Source:ZFIN;Acc:ZDB-GENE-050208-485]
2. BX088711.1 BX088711.1 125 1.842 0.942 - - - - - 0.900 - -
3. si:dkey-161j23.7 ENSDARG00000092882 180 1.685 - 0.807 - - - - 0.878 - - si:dkey-161j23.7 [Source:ZFIN;Acc:ZDB-GENE-091204-391]
4. fpgt ENSDARG00000042139 155 1.66 - - - - - - 0.877 0.783 - fucose-1-phosphate guanylyltransferase [Source:ZFIN;Acc:ZDB-GENE-050522-489]
5. gripap1 ENSDARG00000063069 171 1.641 - - - - - 0.798 0.843 - - GRIP1 associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-070112-922]
6. FANCA ENSDARG00000098241 39 1.632 - - 0.755 - - 0.877 - - - FA complementation group A [Source:ZFIN;Acc:ZDB-GENE-060508-1]
7. plekhf1 ENSDARG00000102435, ENSDARG00000110694 314 1.631 0.746 - - - - - 0.885 - - pleckstrin homology domain containing, family F (with FYVE domain) member 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1289]
8. tmem110 497 1.623 0.809 - - - - - 0.814 - - transmembrane protein 110
9. SLC44A2 ENSDARG00000037059 88 1.618 - 0.749 - - - - 0.869 - - solute carrier family 44 (choline transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3065]
10. spsb3a ENSDARG00000077737 527 1.605 - - - - - - 0.874 0.731 - splA/ryanodine receptor domain and SOCS box containing 3a [Source:ZFIN;Acc:ZDB-GENE-030131-4182]
11. cyp26c1 ENSDARG00000056029 1426 1.601 - 0.757 - - - - 0.844 - - cytochrome P450, family 26, subfamily C, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-050714-2]
12. si:ch211-194k22.8 ENSDARG00000096711 1318 1.601 - 0.705 - - - - 0.896 - - si:ch211-194k22.8 [Source:ZFIN;Acc:ZDB-GENE-030131-1820]
13. CU464087.2 CU464087.2 15 1.597 0.720 - - - - 0.877 - - -
14. CU638740.3 CU638740.3 164 1.595 - 0.734 - - - - 0.861 - -
15. tlr7 ENSDARG00000068812, ENSDARG00000075685 30 1.594 - - - - - - 0.850 0.744 - toll-like receptor 7 [Source:ZFIN;Acc:ZDB-GENE-040219-11]
16. MDH1B ENSDARG00000018008 29 1.589 - - - - - 0.877 - 0.712 - malate dehydrogenase 1B, NAD (soluble) [Source:ZFIN;Acc:ZDB-GENE-060929-384]
17. megf6a ENSDARG00000079199 103 1.585 - 0.787 - - - - 0.798 - - multiple EGF-like-domains 6a [Source:ZFIN;Acc:ZDB-GENE-090312-12]
18. zgc:162331 ENSDARG00000069607 13 1.58 - - - - 0.723 0.857 - - - zgc:162331 [Source:ZFIN;Acc:ZDB-GENE-070410-75]
19. KDELR3 ENSDARG00000040912 109 1.574 0.842 0.732 - - - - - - - KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1387]
20. si:dkeyp-104h9.5 ENSDARG00000073801 722 1.562 0.807 - - - - - 0.755 - - si:dkeyp-104h9.5 [Source:ZFIN;Acc:ZDB-GENE-081104-449]
21. fastkd1 ENSDARG00000056128 141 1.554 - - - - - - 0.825 0.729 - FAST kinase domains 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1833]
22. TARS2 76 1.551 - - - - 0.716 - 0.835 - - threonyl-tRNA synthetase 2, mitochondrial (putative), transcript variant X2
23. SLC5A6 SLC5A6 179 1.551 0.734 0.817 - - - - - - -
24. LRRC8E LRRC8E 495 1.548 - - - - - - 0.832 0.716 -
25. rxrbb ENSDARG00000002006, ENSDARG00000117079 1975 1.539 - - - - - - 0.836 - 0.703 retinoid x receptor, beta b [Source:ZFIN;Acc:ZDB-GENE-990415-242]
26. si:ch211-210h11.7 si:ch211-210h11.7 32 1.537 - - - - - 0.780 - 0.757 -
27. cyp2u1 ENSDARG00000026548 85 1.535 - 0.800 0.735 - - - - - - cytochrome P450, family 2, subfamily U, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-070730-1]
28. vcana ENSDARG00000103515 611 1.526 - - - - - - 0.780 0.746 - versican a [Source:ZFIN;Acc:ZDB-GENE-011023-1]
29. tmub1 ENSDARG00000038787 1012 1.524 0.728 - - - - - 0.796 - - transmembrane and ubiquitin-like domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2504]
30. HDAC5 ENSDARG00000075139 1287 1.506 - - - - - - 0.804 - 0.702 histone deacetylase 5 [Source:ZFIN;Acc:ZDB-GENE-121219-3]
31. PLEKHA6 ENSDARG00000020328 2076 1.497 - 0.761 - - - - 0.736 - - pleckstrin homology domain containing, family A member 6 [Source:ZFIN;Acc:ZDB-GENE-140106-14]
32. AIM1L AIM1L 899 1.495 0.791 - - - - - 0.704 - -
33. fam134c fam134c 1550 1.491 - 0.755 - - - - 0.736 - -
34. arhgap27 ENSDARG00000104255 439 1.476 - 0.771 - - - - 0.705 - - Rho GTPase activating protein 27 [Source:ZFIN;Acc:ZDB-GENE-030131-3922]
35. si:ch211-193k19.1 ENSDARG00000035660 636 1.472 0.742 - - - - - 0.730 - - si:ch211-193k19.1 [Source:ZFIN;Acc:ZDB-GENE-060503-110]
36. vps11 ENSDARG00000036338 421 1.467 - - - - - - 0.736 0.731 - vacuolar protein sorting 11 [Source:ZFIN;Acc:ZDB-GENE-050731-5]
37. exosc4 ENSDARG00000103432 21 1 - - - - - 1.000 - - - exosome component 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1702]
38. qkib ENSDARG00000002026 15 1 - - - - - 1.000 - - - QKI, KH domain containing, RNA binding b [Source:ZFIN;Acc:ZDB-GENE-081028-54]
39. si:zfos-979f1.2 ENSDARG00000011652 24 1 - - - - - 1.000 - - - si:zfos-979f1.2 [Source:ZFIN;Acc:ZDB-GENE-091204-441]
40. CDH7 16 1 - - - - - 1.000 - - - cadherin 7, type 2, transcript variant X1
41. si:ch211-38m6.6 ENSDARG00000076959 12 1 - - - - - 1.000 - - - si:ch211-38m6.6 [Source:ZFIN;Acc:ZDB-GENE-070705-179]
42. MPV17L MPV17L 39 1 - - - - - 1.000 - - -
43. oprm1 ENSDARG00000039434 22 1 - - - - - 1.000 - - - opioid receptor, mu 1 [Source:ZFIN;Acc:ZDB-GENE-010125-1]
44. si:dkey-192i18.3 si:dkey-192i18.3 47 1 - - - - - 1.000 - - -
45. CU184872.1 CU184872.1 15 1 - - - - - 1.000 - - -
46. CABZ01032454.1 CABZ01032454.1 7 1 - - - - - 1.000 - - -
47. DNHD1 DNHD1 4 1 - - - - - 1.000 - - -
48. sycp1 ENSDARG00000003904 8 1 - - - - - 1.000 - - - synaptonemal complex protein 1 [Source:ZFIN;Acc:ZDB-GENE-040910-6]
49. trim46b ENSDARG00000058649 54 1 - - - - - 1.000 - - - tripartite motif containing 46b [Source:ZFIN;Acc:ZDB-GENE-060503-466]
50. glipr1b ENSDARG00000030078 73 0.972 - - - - - 0.972 - - - GLI pathogenesis-related 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1459]
51. nfat5 nfat5 94 0.972 - - - - - 0.972 - - -
52. aldh16a1 ENSDARG00000037935 617 0.962 - - - - - - 0.962 - - aldehyde dehydrogenase 16 family, member A1 [Source:ZFIN;Acc:ZDB-GENE-070112-2062]
53. fam155b ENSDARG00000060152, ENSDARG00000114398 221 0.96 0.960 - - - - - - - - family with sequence similarity 155, member B [Source:ZFIN;Acc:ZDB-GENE-060526-303]
54. ift57 ENSDARG00000021022 288 0.958 - - - - - - 0.958 - - intraflagellar transport 57 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-040614-1]
55. ascl1a ENSDARG00000038386 1290 0.958 - - - - - 0.958 - - - achaete-scute family bHLH transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-980526-90]
56. abca1a ENSDARG00000074635 1085 0.952 - - - - - - 0.952 - - ATP-binding cassette, sub-family A (ABC1), member 1A [Source:ZFIN;Acc:ZDB-GENE-031006-12]
57. dars2 ENSDARG00000060861 137 0.943 - - - - - - 0.943 - - aspartyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-070912-443]
58. CABZ01112647.1 CABZ01112647.1 147 0.943 - - - - - 0.943 - - -
59. MSC ENSDARG00000110016 5 0.943 - - - - - 0.943 - - - musculin (activated B-cell factor-1) [Source:ZFIN;Acc:ZDB-GENE-090806-3]
60. pak1 ENSDARG00000103959 32 0.943 - - - - - 0.943 - - - p21 protein (Cdc42/Rac)-activated kinase 1 [Source:ZFIN;Acc:ZDB-GENE-030826-29]
61. lrrc4bb ENSDARG00000014792 47 0.943 - - - - - 0.943 - - - leucine rich repeat containing 4Bb [Source:ZFIN;Acc:ZDB-GENE-091116-44]
62. ano8a ENSDARG00000076265 20 0.943 - - - - - 0.943 - - - anoctamin 8a [Source:ZFIN;Acc:ZDB-GENE-070912-583]
63. si:ch73-234b20.4 112 0.943 - - - - - 0.943 - - - si:ch73-234b20.4, transcript variant X1
64. mlc1 ENSDARG00000063026 29 0.941 - - - - - 0.941 - - - megalencephalic leukoencephalopathy with subcortical cysts 1 [Source:ZFIN;Acc:ZDB-GENE-050419-145]
65. rnmtl1a 112 0.939 - - - - - 0.939 - - - RNA methyltransferase like 1a
66. gtpbp3 ENSDARG00000018650, ENSDARG00000111427 70 0.934 - 0.934 - - - - - - - GTP binding protein 3, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-050522-335]
67. pdpk1a ENSDARG00000062304 213 0.934 - - - - - - 0.934 - - 3-phosphoinositide dependent protein kinase 1a [Source:ZFIN;Acc:ZDB-GENE-061013-109]
68. lims1 ENSDARG00000026985 2072 0.933 0.933 - - - - - - - - LIM and senescent cell antigen-like domains 1 [Source:ZFIN;Acc:ZDB-GENE-050522-236]
69. rbm5 ENSDARG00000098280 396 0.93 - - - - - - 0.930 - - RNA binding motif protein 5 [Source:ZFIN;Acc:ZDB-GENE-030131-3022]
70. STX3 ENSDARG00000051981 23 0.929 - - - - - 0.929 - - - syntaxin 3 [Source:HGNC Symbol;Acc:HGNC:11438]
71. ZNF740 ZNF740 676 0.924 0.924 - - - - - - - -
72. AKIP1 ENSDARG00000069037, ENSDARG00000111207, ENSDARG00000115020 351 0.924 - - - - - - 0.924 - - A kinase (PRKA) interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-030829-24]
73. TP53BP2 TP53BP2 217 0.923 - - - - - 0.923 - - -
74. ulk4 ENSDARG00000004176 85 0.923 - - - - - - 0.923 - - unc-51 like kinase 4 [Source:ZFIN;Acc:ZDB-GENE-100922-243]
75. limk1a ENSDARG00000103467 97 0.922 - - - - - - 0.922 - - LIM domain kinase 1a [Source:ZFIN;Acc:ZDB-GENE-061212-3]
76. lrrc32 ENSDARG00000040621 348 0.922 - - - - - - 0.922 - - leucine rich repeat containing 32 [Source:ZFIN;Acc:ZDB-GENE-090630-1]
77. zgc:171566 ENSDARG00000105118 340 0.922 0.922 - - - - - - - - zgc:171566 [Source:ZFIN;Acc:ZDB-GENE-050309-193]
78. BDP1_1 BDP1_1 317 0.919 - 0.919 - - - - - - -
79. ncbp2 ENSDARG00000014898 232 0.917 - - - - - - 0.917 - - nuclear cap binding protein subunit 2 [Source:ZFIN;Acc:ZDB-GENE-020419-31]
80. otx2 766 0.916 - - - - - - 0.916 - - orthodenticle homeobox 2, transcript variant X2
81. dse ENSDARG00000017988 2169 0.916 0.916 - - - - - - - - dermatan sulfate epimerase [Source:ZFIN;Acc:ZDB-GENE-041001-202]
82. gadd45bb ENSDARG00000013576 331 0.915 0.915 - - - - - - - - growth arrest and DNA-damage-inducible, beta b [Source:ZFIN;Acc:ZDB-GENE-050223-1]
83. acot13 ENSDARG00000061728, ENSDARG00000114746 516 0.912 - - - - - - 0.912 - - acyl-CoA thioesterase 13 [Source:ZFIN;Acc:ZDB-GENE-060503-437]
84. foxb1b ENSDARG00000053650, ENSDARG00000110408, ENSDARG00000113373 51 0.911 - - - - 0.911 - - - - forkhead box B1b [Source:ZFIN;Acc:ZDB-GENE-990415-77]
85. zgc:112083 ENSDARG00000037405 306 0.91 - - - - - - 0.910 - - zgc:112083 [Source:ZFIN;Acc:ZDB-GENE-050417-284]
86. bop1 ENSDARG00000063627 643 0.908 - - - - - - 0.908 - - block of proliferation 1 [Source:ZFIN;Acc:ZDB-GENE-030219-109]
87. mpped2a ENSDARG00000006889 183 0.908 - 0.908 - - - - - - - metallophosphoesterase domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-050417-241]
88. si:ch211-135f11.1 166 0.907 - - - - - - 0.907 - - si:ch211-135f11.1, transcript variant X3
89. gfra3 ENSDARG00000087704 122 0.907 - - - - - 0.907 - - - GDNF family receptor alpha 3 [Source:ZFIN;Acc:ZDB-GENE-110512-1]
90. fam49bb ENSDARG00000045417 513 0.907 - 0.907 - - - - - - - family with sequence similarity 49, member Bb [Source:ZFIN;Acc:ZDB-GENE-040426-2590]
91. si:ch211-130m23.2 ENSDARG00000095136 121 0.907 - - - - - - 0.907 - - si:ch211-130m23.2 [Source:ZFIN;Acc:ZDB-GENE-060531-13]
92. kcnj11l ENSDARG00000031438 369 0.906 - 0.906 - - - - - - - potassium inwardly-rectifying channel, subfamily J, member 11, like [Source:ZFIN;Acc:ZDB-GENE-050222-2]
93. zswim7 ENSDARG00000067608 179 0.905 - - - - - - 0.905 - - zinc finger, SWIM-type containing 7 [Source:ZFIN;Acc:ZDB-GENE-030131-4255]
94. MAPK8IP1 MAPK8IP1 121 0.904 - - - - - 0.904 - - -
95. dkk1b ENSDARG00000045219, ENSDARG00000112504 1047 0.903 - 0.903 - - - - - - - dickkopf WNT signaling pathway inhibitor 1b [Source:ZFIN;Acc:ZDB-GENE-990708-5]
96. zgc:113452 ENSDARG00000074146 759 0.902 - - - - - - 0.902 - - zgc:113452 [Source:ZFIN;Acc:ZDB-GENE-050913-16]
97. olig2 ENSDARG00000040946 1405 0.902 - - - - - 0.902 - - - oligodendrocyte lineage transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4013]
98. med4 ENSDARG00000041503 395 0.901 0.901 - - - - - - - - mediator complex subunit 4 [Source:ZFIN;Acc:ZDB-GENE-050417-438]
99. extl2 ENSDARG00000063191 118 0.901 - - - - - - 0.901 - - exostosin-like glycosyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-060929-1122]
100. GSG2 GSG2 1162 0.901 - - - - - - 0.901 - -

There are 1169 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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