Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkeyp-52c3.1

Gene Name Gene ID Reads Annotation
si:dkeyp-52c3.1 3 si:dkeyp-52c3.1, transcript variant X1










Genes with expression patterns similar to si:dkeyp-52c3.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkeyp-52c3.1 3 4 - - - 1.000 1.000 - - 1.000 1.000 si:dkeyp-52c3.1, transcript variant X1
2. CR450840.2 CR450840.2 1 2 - - - 1.000 - - - 1.000 -
3. si:ch211-15p9.2 ENSDARG00000062241 1 1.806 - - - 1.000 0.806 - - - - si:ch211-15p9.2 [Source:ZFIN;Acc:ZDB-GENE-060503-577]
4. CABZ01072853.1 CABZ01072853.1 35 1.753 - - - 0.947 0.806 - - - -
5. ftr64 ENSDARG00000101514 33 1.732 - - - - - - - 1.000 0.732 finTRIM family, member 64 [Source:ZFIN;Acc:ZDB-GENE-090508-8]
6. CABZ01086354.1 CABZ01086354.1 22 1.598 - - - 0.789 - - - - 0.809
7. U1_1 U1_1 0 1 - - - 1.000 - - - - -
8. BX005421.6 BX005421.6 4 1 - - - 1.000 - - - - -
9. si:ch73-27e22.5 si:ch73-27e22.5 10 1 - - - - - - - 1.000 -
10. SSTR2 SSTR2 12 1 - - - 1.000 - - - - -
11. kitb ENSDARG00000056133, ENSDARG00000113747 10 1 - - - - - - - 1.000 - v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog b [Source:ZFIN;Acc:ZDB-GENE-050916-2]
12. CU468142.1 CU468142.1 6 1 - - - 1.000 - - - - -
13. FNDC3A ENSDARG00000105503 11 1 - - - - - - - 1.000 - fibronectin type III domain containing 3A [Source:ZFIN;Acc:ZDB-GENE-030131-7015]
14. TRAF2 TRAF2 13 1 - - - 1.000 - - - - -
15. U5_3 U5_3 3 1 - - - - - - - 1.000 -
16. CU856520.1 ENSDARG00000098941 2 1 - - - 1.000 - - - - -
17. si:ch211-198o19.2 si:ch211-198o19.2 0 1 - - - 1.000 - - - - -
18. mcm5_1 ENSDARG00000019507 10 1 - - - 1.000 - - - - - minichromosome maintenance complex component 5 [Source:ZFIN;Acc:ZDB-GENE-021209-1]
19. si:ch211-105d18.7 si:ch211-105d18.7 6 1 - - - 1.000 - - - - -
20. si:dkey-78k22.2 si:dkey-78k22.2 2 1 - - - 1.000 - - - - -
21. hyal6 ENSDARG00000038166, ENSDARG00000111343 2 1 - - - 1.000 - - - - - hyaluronoglucosaminidase 6 [Source:ZFIN;Acc:ZDB-GENE-070112-2372]
22. si:ch211-196h16.12 ENSDARG00000028276 3 1 - - - - - - - 1.000 - si:ch211-196h16.12 [Source:ZFIN;Acc:ZDB-GENE-121214-351]
23. nt5dc1 ENSDARG00000006797 3 1 - - - - - - - 1.000 - 5'-nucleotidase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8274]
24. si:dkey-203c4.2 si:dkey-203c4.2 4 1 - - - 1.000 - - - - -
25. U1_43 U1_43 0 1 - - - 1.000 - - - - -
26. RBBP6_1 RBBP6_1 1 1 - - - - 1.000 - - - -
27. adcy9 ENSDARG00000100869 1 1 - - - 1.000 - - - - - adenylate cyclase 9 [Source:ZFIN;Acc:ZDB-GENE-050208-455]
28. si:ch211-131e11.15 si:ch211-131e11.15 0 1 - - - 1.000 - - - - -
29. CABZ01077140.1 CABZ01077140.1 2 1 - - - - - - - 1.000 -
30. tmem244 ENSDARG00000043847 3 1 - - - - - - - 1.000 - transmembrane protein 244 [Source:ZFIN;Acc:ZDB-GENE-040724-54]
31. zpcx ENSDARG00000059252, ENSDARG00000111002 33 1 - - - 1.000 - - - - - zona pellucida protein C [Source:ZFIN;Acc:ZDB-GENE-040824-1]
32. phc3 ENSDARG00000074604 2 1 - - - - - - - 1.000 - polyhomeotic homolog 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-070912-369]
33. BX321875.3 ENSDARG00000112569 24 1 - - - 1.000 - - - - -
34. GABRA3 ENSDARG00000090883 5 1 - - - - 1.000 - - - - gamma-aminobutyric acid (GABA) A receptor, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-091204-365]
35. si:dkeyp-33c10.5 11 1 - - - 1.000 - - - - - si:dkeyp-33c10.5, transcript variant X2
36. GGA3 ENSDARG00000103667 0 1 - - - - - - - 1.000 - ggolgi-associated, gamma adaptin ear containing, ARF binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-041111-218]
37. si:dkeyp-85d8.6 si:dkeyp-85d8.6 2 1 - - - 1.000 - - - - -
38. dicp1.1 ENSDARG00000091993, ENSDARG00000111013, ENSDARG00000114814 2 1 - - - - - - - 1.000 - diverse immunoglobulin domain-containing protein 1.1 [Source:ZFIN;Acc:ZDB-GENE-120305-1]
39. BICD2_1 BICD2_1 18 1 - - - - - - - 1.000 -
40. ASCC3 ENSDARG00000086678 1 1 - - - - - - - 1.000 - activating signal cointegrator 1 complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-130214-2]
41. CREBBP CREBBP 8 1 - - - 1.000 - - - - -
42. mcf2b ENSDARG00000056603, ENSDARG00000097371 1 1 - - - - - - - 1.000 - MCF.2 cell line derived transforming sequence b [Source:ZFIN;Acc:ZDB-GENE-091118-4]
43. htra3a ENSDARG00000052895 28 1 - - - 1.000 - - - - - HtrA serine peptidase 3a [Source:ZFIN;Acc:ZDB-GENE-040801-245]
44. BX927308.3 BX927308.3 126 1 - - - - - - - 1.000 -
45. DTWD2 ENSDARG00000101873 1 1 - - - - - - - 1.000 - DTW domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-120215-183]
46. top3b ENSDARG00000027586 8 1 - - - 1.000 - - - - - DNA topoisomerase III beta [Source:ZFIN;Acc:ZDB-GENE-070705-37]
47. NLRC5 ENSDARG00000024631 11 1 - - - - - - - 1.000 - NLR family, CARD domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-080429-2]
48. U1_24 U1_24 0 1 - - - 1.000 - - - - -
49. bend5 ENSDARG00000075624 10 1 - - - 1.000 - - - - - BEN domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-081104-460]
50. BX470196.1 BX470196.1 9 1 - - - 1.000 - - - - -
51. CABZ01016604.1 CABZ01016604.1 12 1 - - - 1.000 - - - - -
52. soga3a ENSDARG00000063311, ENSDARG00000088571, ENSDARG00000097245 11 1 - - - 1.000 - - - - - SOGA family member 3a [Source:ZFIN;Acc:ZDB-GENE-100921-84]
53. CR626884.3 ENSDARG00000104648 1 1 - - - 1.000 - - - - -
54. si:dkey-27j5.5 ENSDARG00000026383 6 1 - - - - - - - 1.000 - si:dkey-27j5.5 [Source:ZFIN;Acc:ZDB-GENE-121214-264]
55. mtp 1 1 - - - 1.000 - - - - - microsomal triglyceride transfer protein
56. GM2A ENSDARG00000088439 55 1 - - - 1.000 - - - - - GM2 ganglioside activator [Source:ZFIN;Acc:ZDB-GENE-050417-373]
57. ZNF337_19 ZNF337_19 3 1 - - - - 1.000 - - - -
58. ush1c ENSDARG00000051876, ENSDARG00000112799 25 1 - - - - 1.000 - - - - Usher syndrome 1C [Source:ZFIN;Acc:ZDB-GENE-060312-41]
59. ryr2b ENSDARG00000003706 6 1 - - - 1.000 - - - - - ryanodine receptor 2b (cardiac) [Source:ZFIN;Acc:ZDB-GENE-061226-3]
60. SLCO2B1 ENSDARG00000054609 0 1 - - - - - - - 1.000 - solute carrier organic anion transporter family, member 2B1 [Source:ZFIN;Acc:ZDB-GENE-051023-6]
61. STX1A ENSDARG00000058994 0 1 - - - 1.000 - - - - - syntaxin 1A (brain) [Source:ZFIN;Acc:ZDB-GENE-100802-1]
62. si:dkey-118j18.3 si:dkey-118j18.3 4 1 - - - - - - - 1.000 -
63. si:dkey-164n2.1 47 1 - - - - - - - 1.000 - si:dkey-164n2.1, transcript variant X1
64. guca1c ENSDARG00000030758 9 1 - - - 1.000 - - - - - guanylate cyclase activator 1C [Source:ZFIN;Acc:ZDB-GENE-030829-1]
65. CABZ01080134.1 CABZ01080134.1 2 1 - - - 1.000 - - - - -
66. arhgap23b ENSDARG00000026840 6 1 - - - 1.000 - - - - - Rho GTPase activating protein 23b [Source:ZFIN;Acc:ZDB-GENE-081031-78]
67. ONECUT2 ENSDARG00000090387 8 1 - - - 1.000 - - - - - one cut homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-120215-73]
68. si:ch211-202n12.5 si:ch211-202n12.5 19 1 - - - - - - - 1.000 -
69. RP1L1 RP1L1 15 1 - - - - - - - 1.000 -
70. inpp5k inpp5k 2 1 - - - 1.000 - - - - -
71. COL26A1 COL26A1 9 1 - - - - - - - 1.000 -
72. FBXO15 ENSDARG00000016897 4 1 - - - 1.000 - - - - - F-box protein 15 [Source:ZFIN;Acc:ZDB-GENE-080416-4]
73. si:ch1073-403i13.1 si:ch1073-403i13.1 1 1 - - - - - - - 1.000 -
74. FMNL1 FMNL1 7 1 - - - 1.000 - - - - -
75. MYL2 MYL2 7 1 - - - 1.000 - - - - -
76. gpr155a ENSDARG00000090804 27 1 - - - 1.000 - - - - - G protein-coupled receptor 155a [Source:ZFIN;Acc:ZDB-GENE-100922-89]
77. EXD1 ENSDARG00000098669 27 1 - - - 1.000 - - - - - exonuclease 3'-5' domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060825-267]
78. FBXL19 FBXL19 8 1 - - - - - - - 1.000 -
79. IMPG2_1 IMPG2_1 2 1 - - - 1.000 - - - - -
80. si:dkey-201i6.5 si:dkey-201i6.5 3 1 - - - - - - - 1.000 -
81. cx52.9 ENSDARG00000086453 7 1 - - - - - - - 1.000 - connexin 52.9 [Source:ZFIN;Acc:ZDB-GENE-040426-2421]
82. CU181898.1 CU181898.1 0 1 - - - 1.000 - - - - -
83. zgc:113295 ENSDARG00000074768, ENSDARG00000103947 36 1 - - - - - - - 1.000 - zgc:113295 [Source:ZFIN;Acc:ZDB-GENE-050320-122]
84. cd44a ENSDARG00000087863 4 1 - - - 1.000 - - - - - CD44 molecule (Indian blood group) a [Source:ZFIN;Acc:ZDB-GENE-110429-1]
85. m17 ENSDARG00000035435 28 1 - - - - - - - 1.000 - IL-6 subfamily cytokine M17 [Source:ZFIN;Acc:ZDB-GENE-060526-368]
86. vtg3 ENSDARG00000016448 8 1 - - - 1.000 - - - - - vitellogenin 3, phosvitinless [Source:ZFIN;Acc:ZDB-GENE-991019-2]
87. zgc:114037_5 6 1 - - - 1.000 - - - - - zgc:114037
88. si:dkeyp-69b9.2 si:dkeyp-69b9.2 25 1 - - - 1.000 - - - - -
89. ca14 ENSDARG00000061697 1 1 - - - - - - - 1.000 - carbonic anhydrase XIV [Source:ZFIN;Acc:ZDB-GENE-051030-57]
90. BX005006.2 BX005006.2 1 1 - - - - - - - 1.000 -
91. hs6st1a ENSDARG00000054754 1 1 - - - - - - - 1.000 - heparan sulfate 6-O-sulfotransferase 1a [Source:ZFIN;Acc:ZDB-GENE-050524-1]
92. si:ch211-14a17.7 ENSDARG00000038720, ENSDARG00000115206 1 1 - - - 1.000 - - - - - si:ch211-14a17.7 [Source:ZFIN;Acc:ZDB-GENE-030616-590]
93. TRPC7 TRPC7 1 1 - - - 1.000 - - - - -
94. CABZ01060030.1 ENSDARG00000106579 55 1 - - - 1.000 - - - - - rho-related BTB domain-containing protein 2-like [Source:NCBI gene;Acc:100331257]
95. zgc:174698_1 ENSDARG00000075731, ENSDARG00000077266, ENSDARG00000098236 1 1 - - - - - - - 1.000 - zgc:174698 [Source:ZFIN;Acc:ZDB-GENE-080204-74]
96. SGSM1_1 SGSM1_1 40 1 - - - 1.000 - - - - -
97. dcst2 ENSDARG00000088693 1 1 - - - 1.000 - - - - - DC-STAMP domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070809-6]
98. BX571813.1 ENSDARG00000107283 0 1 - - - - - - - 1.000 -
99. si:ch73-21k16.5 ENSDARG00000078770 7 1 - - - 1.000 - - - - - si:ch73-21k16.5 [Source:ZFIN;Acc:ZDB-GENE-030131-8374]
100. ipp ENSDARG00000075339 3 1 - - - - - - - 1.000 - intracisternal A particle-promoted polypeptide [Source:ZFIN;Acc:ZDB-GENE-080204-28]

There are 277 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA