Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkeyp-52c3.1

Gene Name Gene ID Reads Annotation
si:dkeyp-52c3.1 3 si:dkeyp-52c3.1, transcript variant X1










Genes with expression patterns similar to si:dkeyp-52c3.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkeyp-52c3.1 3 4 - - - 1.000 1.000 - - 1.000 1.000 si:dkeyp-52c3.1, transcript variant X1
2. CR450840.2 CR450840.2 1 2 - - - 1.000 - - - 1.000 -
3. si:ch211-15p9.2 ENSDARG00000062241 1 1.806 - - - 1.000 0.806 - - - - si:ch211-15p9.2 [Source:ZFIN;Acc:ZDB-GENE-060503-577]
4. CABZ01072853.1 CABZ01072853.1 35 1.753 - - - 0.947 0.806 - - - -
5. ftr64 ENSDARG00000101514 33 1.732 - - - - - - - 1.000 0.732 finTRIM family, member 64 [Source:ZFIN;Acc:ZDB-GENE-090508-8]
6. CABZ01086354.1 CABZ01086354.1 22 1.598 - - - 0.789 - - - - 0.809
7. htra3a ENSDARG00000052895 28 1 - - - 1.000 - - - - - HtrA serine peptidase 3a [Source:ZFIN;Acc:ZDB-GENE-040801-245]
8. BX927308.3 BX927308.3 126 1 - - - - - - - 1.000 -
9. DTWD2 ENSDARG00000101873 1 1 - - - - - - - 1.000 - DTW domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-120215-183]
10. ASCC3 ENSDARG00000086678 1 1 - - - - - - - 1.000 - activating signal cointegrator 1 complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-130214-2]
11. mcf2b ENSDARG00000056603, ENSDARG00000097371 1 1 - - - - - - - 1.000 - MCF.2 cell line derived transforming sequence b [Source:ZFIN;Acc:ZDB-GENE-091118-4]
12. CREBBP CREBBP 8 1 - - - 1.000 - - - - -
13. dicp1.1 ENSDARG00000091993, ENSDARG00000111013, ENSDARG00000114814 2 1 - - - - - - - 1.000 - diverse immunoglobulin domain-containing protein 1.1 [Source:ZFIN;Acc:ZDB-GENE-120305-1]
14. BICD2_1 BICD2_1 18 1 - - - - - - - 1.000 -
15. bend5 ENSDARG00000075624 10 1 - - - 1.000 - - - - - BEN domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-081104-460]
16. U1_24 U1_24 0 1 - - - 1.000 - - - - -
17. NLRC5 ENSDARG00000024631 11 1 - - - - - - - 1.000 - NLR family, CARD domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-080429-2]
18. top3b ENSDARG00000027586 8 1 - - - 1.000 - - - - - DNA topoisomerase III beta [Source:ZFIN;Acc:ZDB-GENE-070705-37]
19. zpcx ENSDARG00000059252, ENSDARG00000111002 33 1 - - - 1.000 - - - - - zona pellucida protein C [Source:ZFIN;Acc:ZDB-GENE-040824-1]
20. CABZ01077140.1 CABZ01077140.1 2 1 - - - - - - - 1.000 -
21. tmem244 ENSDARG00000043847 3 1 - - - - - - - 1.000 - transmembrane protein 244 [Source:ZFIN;Acc:ZDB-GENE-040724-54]
22. si:ch211-131e11.15 si:ch211-131e11.15 0 1 - - - 1.000 - - - - -
23. U1_43 U1_43 0 1 - - - 1.000 - - - - -
24. adcy9 ENSDARG00000100869 1 1 - - - 1.000 - - - - - adenylate cyclase 9 [Source:ZFIN;Acc:ZDB-GENE-050208-455]
25. RBBP6_1 RBBP6_1 1 1 - - - - 1.000 - - - -
26. si:dkeyp-85d8.6 si:dkeyp-85d8.6 2 1 - - - 1.000 - - - - -
27. GGA3 ENSDARG00000103667 0 1 - - - - - - - 1.000 - ggolgi-associated, gamma adaptin ear containing, ARF binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-041111-218]
28. si:dkeyp-33c10.5 11 1 - - - 1.000 - - - - - si:dkeyp-33c10.5, transcript variant X2
29. BX321875.3 ENSDARG00000112569 24 1 - - - 1.000 - - - - -
30. phc3 ENSDARG00000074604 2 1 - - - - - - - 1.000 - polyhomeotic homolog 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-070912-369]
31. GABRA3 ENSDARG00000090883 5 1 - - - - 1.000 - - - - gamma-aminobutyric acid (GABA) A receptor, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-091204-365]
32. si:dkey-78k22.2 si:dkey-78k22.2 2 1 - - - 1.000 - - - - -
33. mcm5_1 ENSDARG00000019507 10 1 - - - 1.000 - - - - - minichromosome maintenance complex component 5 [Source:ZFIN;Acc:ZDB-GENE-021209-1]
34. si:ch211-105d18.7 si:ch211-105d18.7 6 1 - - - 1.000 - - - - -
35. nt5dc1 ENSDARG00000006797 3 1 - - - - - - - 1.000 - 5'-nucleotidase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8274]
36. si:dkey-203c4.2 si:dkey-203c4.2 4 1 - - - 1.000 - - - - -
37. hyal6 ENSDARG00000038166, ENSDARG00000111343 2 1 - - - 1.000 - - - - - hyaluronoglucosaminidase 6 [Source:ZFIN;Acc:ZDB-GENE-070112-2372]
38. si:ch211-196h16.12 ENSDARG00000028276 3 1 - - - - - - - 1.000 - si:ch211-196h16.12 [Source:ZFIN;Acc:ZDB-GENE-121214-351]
39. SSTR2 SSTR2 12 1 - - - 1.000 - - - - -
40. si:ch73-27e22.5 si:ch73-27e22.5 10 1 - - - - - - - 1.000 -
41. BX005421.6 BX005421.6 4 1 - - - 1.000 - - - - -
42. U1_1 U1_1 0 1 - - - 1.000 - - - - -
43. CU856520.1 ENSDARG00000098941 2 1 - - - 1.000 - - - - -
44. si:ch211-198o19.2 si:ch211-198o19.2 0 1 - - - 1.000 - - - - -
45. CU468142.1 CU468142.1 6 1 - - - 1.000 - - - - -
46. U5_3 U5_3 3 1 - - - - - - - 1.000 -
47. FNDC3A ENSDARG00000105503 11 1 - - - - - - - 1.000 - fibronectin type III domain containing 3A [Source:ZFIN;Acc:ZDB-GENE-030131-7015]
48. TRAF2 TRAF2 13 1 - - - 1.000 - - - - -
49. kitb ENSDARG00000056133, ENSDARG00000113747 10 1 - - - - - - - 1.000 - v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog b [Source:ZFIN;Acc:ZDB-GENE-050916-2]
50. FBXL19 FBXL19 8 1 - - - - - - - 1.000 -
51. EXD1 ENSDARG00000098669 27 1 - - - 1.000 - - - - - exonuclease 3'-5' domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060825-267]
52. IMPG2_1 IMPG2_1 2 1 - - - 1.000 - - - - -
53. gpr155a ENSDARG00000090804 27 1 - - - 1.000 - - - - - G protein-coupled receptor 155a [Source:ZFIN;Acc:ZDB-GENE-100922-89]
54. si:dkey-201i6.5 si:dkey-201i6.5 3 1 - - - - - - - 1.000 -
55. inpp5k inpp5k 2 1 - - - 1.000 - - - - -
56. RP1L1 RP1L1 15 1 - - - - - - - 1.000 -
57. COL26A1 COL26A1 9 1 - - - - - - - 1.000 -
58. si:ch211-202n12.5 si:ch211-202n12.5 19 1 - - - - - - - 1.000 -
59. MYL2 MYL2 7 1 - - - 1.000 - - - - -
60. FMNL1 FMNL1 7 1 - - - 1.000 - - - - -
61. FBXO15 ENSDARG00000016897 4 1 - - - 1.000 - - - - - F-box protein 15 [Source:ZFIN;Acc:ZDB-GENE-080416-4]
62. si:ch1073-403i13.1 si:ch1073-403i13.1 1 1 - - - - - - - 1.000 -
63. si:dkey-164n2.1 47 1 - - - - - - - 1.000 - si:dkey-164n2.1, transcript variant X1
64. si:dkey-118j18.3 si:dkey-118j18.3 4 1 - - - - - - - 1.000 -
65. STX1A ENSDARG00000058994 0 1 - - - 1.000 - - - - - syntaxin 1A (brain) [Source:ZFIN;Acc:ZDB-GENE-100802-1]
66. SLCO2B1 ENSDARG00000054609 0 1 - - - - - - - 1.000 - solute carrier organic anion transporter family, member 2B1 [Source:ZFIN;Acc:ZDB-GENE-051023-6]
67. ryr2b ENSDARG00000003706 6 1 - - - 1.000 - - - - - ryanodine receptor 2b (cardiac) [Source:ZFIN;Acc:ZDB-GENE-061226-3]
68. ush1c ENSDARG00000051876, ENSDARG00000112799 25 1 - - - - 1.000 - - - - Usher syndrome 1C [Source:ZFIN;Acc:ZDB-GENE-060312-41]
69. ZNF337_19 ZNF337_19 3 1 - - - - 1.000 - - - -
70. GM2A ENSDARG00000088439 55 1 - - - 1.000 - - - - - GM2 ganglioside activator [Source:ZFIN;Acc:ZDB-GENE-050417-373]
71. ONECUT2 ENSDARG00000090387 8 1 - - - 1.000 - - - - - one cut homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-120215-73]
72. CABZ01080134.1 CABZ01080134.1 2 1 - - - 1.000 - - - - -
73. arhgap23b ENSDARG00000026840 6 1 - - - 1.000 - - - - - Rho GTPase activating protein 23b [Source:ZFIN;Acc:ZDB-GENE-081031-78]
74. guca1c ENSDARG00000030758 9 1 - - - 1.000 - - - - - guanylate cyclase activator 1C [Source:ZFIN;Acc:ZDB-GENE-030829-1]
75. CR626884.3 ENSDARG00000104648 1 1 - - - 1.000 - - - - -
76. soga3a ENSDARG00000063311, ENSDARG00000088571, ENSDARG00000097245 11 1 - - - 1.000 - - - - - SOGA family member 3a [Source:ZFIN;Acc:ZDB-GENE-100921-84]
77. CABZ01016604.1 CABZ01016604.1 12 1 - - - 1.000 - - - - -
78. BX470196.1 BX470196.1 9 1 - - - 1.000 - - - - -
79. mtp 1 1 - - - 1.000 - - - - - microsomal triglyceride transfer protein
80. si:dkey-27j5.5 ENSDARG00000026383 6 1 - - - - - - - 1.000 - si:dkey-27j5.5 [Source:ZFIN;Acc:ZDB-GENE-121214-264]
81. scpp1 ENSDARG00000090416 1 1 - - - 1.000 - - - - - secretory calcium-binding phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-090424-1]
82. RASSF8 RASSF8 0 1 - - - - - - - 1.000 -
83. BX649394.1 BX649394.1 1 1 - - - - - - - 1.000 -
84. 5S_rRNA_15 5S_rRNA_15 9 1 - - - - 1.000 - - - -
85. PLA2G4C_1 PLA2G4C_1 2 1 - - - 1.000 - - - - -
86. CU302326.1 CU302326.1 1 1 - - - 1.000 - - - - -
87. pde6g 8 1 - - - - - - - 1.000 - phosphodiesterase 6G, cGMP-specific, rod, gamma
88. si:ch211-145g9.7 32 1 - - - - - - - 1.000 - si:ch211-145g9.7, transcript variant X1
89. TRPC7 TRPC7 1 1 - - - 1.000 - - - - -
90. CABZ01060030.1 ENSDARG00000106579 55 1 - - - 1.000 - - - - - rho-related BTB domain-containing protein 2-like [Source:NCBI gene;Acc:100331257]
91. hs6st1a ENSDARG00000054754 1 1 - - - - - - - 1.000 - heparan sulfate 6-O-sulfotransferase 1a [Source:ZFIN;Acc:ZDB-GENE-050524-1]
92. si:ch211-14a17.7 ENSDARG00000038720, ENSDARG00000115206 1 1 - - - 1.000 - - - - - si:ch211-14a17.7 [Source:ZFIN;Acc:ZDB-GENE-030616-590]
93. C10H5orf42 C10H5orf42 5 1 - - - - - - - 1.000 -
94. AL929092.3 AL929092.3 0 1 - - - - - - - 1.000 -
95. ipp ENSDARG00000075339 3 1 - - - - - - - 1.000 - intracisternal A particle-promoted polypeptide [Source:ZFIN;Acc:ZDB-GENE-080204-28]
96. dcst2 ENSDARG00000088693 1 1 - - - 1.000 - - - - - DC-STAMP domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070809-6]
97. SGSM1_1 SGSM1_1 40 1 - - - 1.000 - - - - -
98. si:ch73-21k16.5 ENSDARG00000078770 7 1 - - - 1.000 - - - - - si:ch73-21k16.5 [Source:ZFIN;Acc:ZDB-GENE-030131-8374]
99. BX571813.1 ENSDARG00000107283 0 1 - - - - - - - 1.000 -
100. zgc:174698_1 ENSDARG00000075731, ENSDARG00000077266, ENSDARG00000098236 1 1 - - - - - - - 1.000 - zgc:174698 [Source:ZFIN;Acc:ZDB-GENE-080204-74]

There are 277 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA