Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkeyp-106c3.1

Gene Name Gene ID Reads Annotation
si:dkeyp-106c3.1 ENSDARG00000090623 225 si:dkeyp-106c3.1 [Source:ZFIN;Acc:ZDB-GENE-050411-73]










Genes with expression patterns similar to si:dkeyp-106c3.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkeyp-106c3.1 ENSDARG00000090623 225 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:dkeyp-106c3.1 [Source:ZFIN;Acc:ZDB-GENE-050411-73]
2. GRIN2B GRIN2B 140 1.998 - 1.000 - - 0.998 - - - -
3. dlg2 ENSDARG00000099323 162 1.883 - 0.890 - - 0.993 - - - - discs, large homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050221-3]
4. si:ch211-237l4.6 ENSDARG00000056915 49 1.875 - 1.000 - - - 0.875 - - - si:ch211-237l4.6 [Source:ZFIN;Acc:ZDB-GENE-040724-42]
5. usp25 ENSDARG00000012314 734 1.846 - - - - 0.938 - 0.908 - - ubiquitin specific peptidase 25 [Source:ZFIN;Acc:ZDB-GENE-040426-2847]
6. C17H15orf41 C17H15orf41 313 1.793 - 0.843 - - 0.950 - - - -
7. csf2rb ENSDARG00000076586, ENSDARG00000112627, ENSDARG00000114668 9 1.782 - 1.000 - - - 0.782 - - - colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage) [Source:ZFIN;Acc:ZDB-GENE-080115-1]
8. fam43b ENSDARG00000070222 92 1.776 - 1.000 - - - 0.776 - - - family with sequence similarity 43, member B [Source:ZFIN;Acc:ZDB-GENE-040912-11]
9. TTF1_5 TTF1_5 705 1.726 - - - - 0.991 0.735 - - -
10. six3a ENSDARG00000058008, ENSDARG00000114971 586 1.68 - - - 0.740 0.940 - - - - SIX homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-990415-127]
11. dnm2a ENSDARG00000069937 32 1.676 - 0.780 - - - - 0.896 - - dynamin 2a [Source:ZFIN;Acc:ZDB-GENE-050913-84]
12. rnf34b ENSDARG00000054036 121 1.669 - 0.720 - - - - 0.949 - - ring finger protein 34b [Source:ZFIN;Acc:ZDB-GENE-071004-31]
13. nr2f1b ENSDARG00000017168 1487 1.668 - - - - 0.912 0.756 - - - nuclear receptor subfamily 2, group F, member 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1438]
14. hcls1 ENSDARG00000012729 1547 1.663 - - - - 0.929 - 0.734 - - hematopoietic cell-specific Lyn substrate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7191]
15. BX323459.1 ENSDARG00000109508 1476 1.663 - 0.703 - - 0.960 - - - -
16. BX957297.2 ENSDARG00000105608 194 1.657 - 0.742 - - - 0.915 - - -
17. arl11 ENSDARG00000036637 707 1.645 - - - - 0.937 - 0.708 - - ADP-ribosylation factor-like 11 [Source:ZFIN;Acc:ZDB-GENE-030131-3410]
18. C25H15orf27 C25H15orf27 69 1.625 - - - - - 0.892 - 0.733 -
19. mst1ra ENSDARG00000060235 78 1.616 - - - - - 0.742 0.874 - - macrophage stimulating 1 receptor a [Source:ZFIN;Acc:ZDB-GENE-071218-2]
20. CABZ01112521.1 CABZ01112521.1 83 1.593 - 0.865 - - - 0.728 - - -
21. tlx3b ENSDARG00000017615, ENSDARG00000114069 84 1.571 - - 0.734 - - 0.837 - - - T cell leukemia homeobox 3b [Source:ZFIN;Acc:ZDB-GENE-021021-1]
22. zgc:174688 zgc:174688 170 1.488 - - - - - 0.776 0.712 - -
23. ube2r2 ENSDARG00000058740 83 1.485 - 0.710 - - - 0.775 - - - ubiquitin-conjugating enzyme E2R 2 [Source:ZFIN;Acc:ZDB-GENE-040718-344]
24. sox19b ENSDARG00000040266 532 1.444 - 0.728 - - - 0.716 - - - SRY (sex determining region Y)-box 19b [Source:ZFIN;Acc:ZDB-GENE-010111-1]
25. abcc9 ENSDARG00000015985 20 1 - 1.000 - - - - - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 9 [Source:ZFIN;Acc:ZDB-GENE-050517-23]
26. GABRA3 ENSDARG00000090883 5 1 - 1.000 - - - - - - - gamma-aminobutyric acid (GABA) A receptor, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-091204-365]
27. si:dkey-241f21.7 si:dkey-241f21.7 3 1 - 1.000 - - - - - - -
28. supt3h ENSDARG00000098141 18 1 - 1.000 - - - - - - - SPT3 homolog, SAGA and STAGA complex component [Source:ZFIN;Acc:ZDB-GENE-040718-370]
29. nlrc3 ENSDARG00000103146 6 1 - 1.000 - - - - - - - NLR family, CARD domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-071119-1]
30. CABZ01073954.1 CABZ01073954.1 258 1 - 1.000 - - - - - - -
31. sez6l ENSDARG00000100594 35 1 - 1.000 - - - - - - - seizure related 6 homolog (mouse)-like [Source:ZFIN;Acc:ZDB-GENE-091204-162]
32. pycr1 pycr1 1258 1 - 1.000 - - - - - - -
33. pou1f1 ENSDARG00000058924, ENSDARG00000110816, ENSDARG00000115109 17 1 - 1.000 - - - - - - - POU class 1 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040630-7]
34. egr2a ENSDARG00000044098 1101 1 - 1.000 - - - - - - - early growth response 2a [Source:ZFIN;Acc:ZDB-GENE-030723-6]
35. DOCK4 DOCK4 78 1 - 1.000 - - - - - - -
36. ABCC6 ABCC6 5 1 - 1.000 - - - - - - -
37. CU459152.1 CU459152.1 407 1 - 1.000 - - - - - - -
38. phf21aa ENSDARG00000006878 31 1 - 1.000 - - - - - - - PHD finger protein 21Aa [Source:ZFIN;Acc:ZDB-GENE-050208-99]
39. ninj2 ENSDARG00000079824 1 1 - 1.000 - - - - - - - ninjurin 2 [Source:ZFIN;Acc:ZDB-GENE-100422-19]
40. si:ch211-197e7.1 ENSDARG00000095200 1 1 - 1.000 - - - - - - - si:ch211-197e7.1 [Source:ZFIN;Acc:ZDB-GENE-081103-26]
41. ZNF70_9 ZNF70_9 1 1 - 1.000 - - - - - - -
42. PRR12 PRR12 38 1 - 1.000 - - - - - - -
43. si:ch73-7i4.1 ENSDARG00000094554 771 1 - 1.000 - - - - - - - si:ch73-7i4.1 [Source:ZFIN;Acc:ZDB-GENE-100921-19]
44. entpd2b ENSDARG00000044795 7 1 - 1.000 - - - - - - - ectonucleoside triphosphate diphosphohydrolase 2b [Source:ZFIN;Acc:ZDB-GENE-061013-2]
45. pja2 ENSDARG00000100296 1 1 - 1.000 - - - - - - - praja ring finger ubiquitin ligase 2 [Source:ZFIN;Acc:ZDB-GENE-060526-337]
46. ccr6a ENSDARG00000087474 10 1 - 1.000 - - - - - - - chemokine (C-C motif) receptor 6a [Source:ZFIN;Acc:ZDB-GENE-040625-126]
47. BX470131.1 BX470131.1 86 1 - 1.000 - - - - - - -
48. si:dkey-3n22.9 ENSDARG00000096273 1 1 - 1.000 - - - - - - - si:dkey-3n22.9 [Source:ZFIN;Acc:ZDB-GENE-120215-95]
49. atp2b2 ENSDARG00000044902, ENSDARG00000063433 140 1 - 1.000 - - - - - - - ATPase plasma membrane Ca2+ transporting 2 [Source:ZFIN;Acc:ZDB-GENE-061016-1]
50. RNaseP_nuc RNaseP_nuc 7 1 - 1.000 - - - - - - -
51. ctslb ENSDARG00000039173, ENSDARG00000074306 27150 1 - 1.000 - - - - - - - cathepsin Lb [Source:ZFIN;Acc:ZDB-GENE-980526-285]
52. CABZ01007222.1 CABZ01007222.1 78 1 - 1.000 - - - - - - -
53. si:dkey-14o6.7 si:dkey-14o6.7 9 1 - 1.000 - - - - - - -
54. olfm1a ENSDARG00000018270 107 1 - 1.000 - - - - - - - olfactomedin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-194]
55. si:ch211-214j24.15 ENSDARG00000063481 8 1 - 1.000 - - - - - - - si:ch211-214j24.15 [Source:ZFIN;Acc:ZDB-GENE-110914-85]
56. klc4 ENSDARG00000086985 4 1 - 1.000 - - - - - - - kinesin light chain 4 [Source:ZFIN;Acc:ZDB-GENE-050417-350]
57. apnl ENSDARG00000090900 21 1 - 1.000 - - - - - - - actinoporin-like protein [Source:ZFIN;Acc:ZDB-GENE-030131-8907]
58. lsm10 5 1 - 1.000 - - - - - - - LSM10, U7 small nuclear RNA associated
59. si:dkey-20d21.12 ENSDARG00000092123 38 1 - 1.000 - - - - - - - si:dkey-20d21.12 [Source:ZFIN;Acc:ZDB-GENE-081104-365]
60. SNORA31 SNORA31 23 1 - 1.000 - - - - - - -
61. RAPGEF4 ENSDARG00000079872 82 1 - 1.000 - - - - - - - Rap guanine nucleotide exchange factor (GEF) 4 [Source:ZFIN;Acc:ZDB-GENE-070912-385]
62. SMARCA4 ENSDARG00000104339 48 1 - 1.000 - - - - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 [Source:HGNC Symbol;Acc:HGNC:11100]
63. si:dkey-233e3.4 si:dkey-233e3.4 3 1 - 1.000 - - - - - - -
64. si:ch211-199m9.2 si:ch211-199m9.2 9 1 - 1.000 - - - - - - -
65. rims1a ENSDARG00000074680 143 1 - 1.000 - - - - - - - regulating synaptic membrane exocytosis 1a [Source:ZFIN;Acc:ZDB-GENE-090312-135]
66. SDSL ENSDARG00000074698 34 1 - 1.000 - - - - - - - serine dehydratase-like [Source:ZFIN;Acc:ZDB-GENE-131121-410]
67. slc13a1 ENSDARG00000045638, ENSDARG00000114835 13 1 - 1.000 - - - - - - - solute carrier family 13 member 1 [Source:ZFIN;Acc:ZDB-GENE-031222-3]
68. gabrb3 ENSDARG00000023771, ENSDARG00000114822 180 1 - 1.000 - - - - - - - gamma-aminobutyric acid (GABA) A receptor, beta 3 [Source:ZFIN;Acc:ZDB-GENE-101102-2]
69. si:dkeyp-51f12.2 ENSDARG00000095606 24 1 - 1.000 - - - - - - - si:dkeyp-51f12.2 [Source:ZFIN;Acc:ZDB-GENE-070705-546]
70. ODF2 ODF2 6 1 - 1.000 - - - - - - -
71. tfr1b ENSDARG00000077372, ENSDARG00000112880 24 1 - 1.000 - - - - - - - transferrin receptor 1b [Source:ZFIN;Acc:ZDB-GENE-041220-2]
72. kcna1 kcna1 174 1 - 1.000 - - - - - - -
73. CABZ01085979.1 CABZ01085979.1 4 1 - 1.000 - - - - - - -
74. cldnd ENSDARG00000006580 17 1 - 1.000 - - - - - - - claudin d [Source:ZFIN;Acc:ZDB-GENE-010328-4]
75. BX537120.1 ENSDARG00000109968 0 1 - 1.000 - - - - - - -
76. BX321870.1 ENSDARG00000098519 9 1 - 1.000 - - - - - - -
77. cybb ENSDARG00000056615 177 1 - 1.000 - - - - - - - cytochrome b-245, beta polypeptide (chronic granulomatous disease) [Source:ZFIN;Acc:ZDB-GENE-040426-1380]
78. AL954676.2 AL954676.2 50 1 - 1.000 - - - - - - -
79. ca10b ENSDARG00000009568 8 1 - 1.000 - - - - - - - carbonic anhydrase Xb [Source:ZFIN;Acc:ZDB-GENE-080815-2]
80. SRR_1 SRR_1 0 1 - 1.000 - - - - - - -
81. ALOX5_2 ALOX5_2 6 1 - 1.000 - - - - - - -
82. si:ch211-239j9.1 ENSDARG00000096319 27 1 - 1.000 - - - - - - - si:ch211-239j9.1 [Source:ZFIN;Acc:ZDB-GENE-120215-212]
83. CABZ01023601.1 CABZ01023601.1 1 1 - 1.000 - - - - - - -
84. figf 48 1 - 1.000 - - - - - - - c-fos induced growth factor, transcript variant X2
85. zgc:112994 ENSDARG00000026296 5 1 - 1.000 - - - - - - - zgc:112994 [Source:ZFIN;Acc:ZDB-GENE-050522-519]
86. FBXO40_1 FBXO40_1 59 1 - 1.000 - - - - - - -
87. hsp70l_1 ENSDARG00000055723 72 1 - 1.000 - - - - - - - heat shock cognate 70-kd protein, like [Source:ZFIN;Acc:ZDB-GENE-050321-1]
88. CR626874.1 ENSDARG00000100141 55 1 - 1.000 - - - - - - -
89. urgcp ENSDARG00000036767 6 1 - 1.000 - - - - - - - upregulator of cell proliferation [Source:ZFIN;Acc:ZDB-GENE-120215-160]
90. MOB2 MOB2 4 1 - 1.000 - - - - - - -
91. HELZ2_1 ENSDARG00000012600 53 1 - 1.000 - - - - - - - helicase with zinc finger 2 [Source:HGNC Symbol;Acc:HGNC:30021]
92. si:dkeyp-104f11.7 si:dkeyp-104f11.7 4 1 - 1.000 - - - - - - -
93. MFAP4_2 MFAP4_2 592 1 - 1.000 - - - - - - -
94. LMTK3 LMTK3 222 1 - 1.000 - - - - - - -
95. b3galtla b3galtla 111 1 - 1.000 - - - - - - -
96. fez1 ENSDARG00000023174 701 1 - 1.000 - - - - - - - fasciculation and elongation protein zeta 1 (zygin I) [Source:ZFIN;Acc:ZDB-GENE-040426-2723]
97. CR792453.1 ENSDARG00000095699 4 1 - 1.000 - - - - - - -
98. lama3 ENSDARG00000071462 1 1 - 1.000 - - - - - - - laminin, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-050208-475]
99. tmem178 ENSDARG00000020758 77 1 - 1.000 - - - - - - - transmembrane protein 178 [Source:ZFIN;Acc:ZDB-GENE-060929-756]
100. KIF2A_1 ENSDARG00000043571 189 1 - 1.000 - - - - - - - kinesin family member 2A [Source:HGNC Symbol;Acc:HGNC:6318]

There are 1291 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA