Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-9c18.1

Gene Name Gene ID Reads Annotation
si:dkey-9c18.1 si:dkey-9c18.1 3










Genes with expression patterns similar to si:dkey-9c18.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-9c18.1 si:dkey-9c18.1 3 5 - - 1.000 - 1.000 1.000 - 1.000 1.000
2. si:dkey-20j1.5 si:dkey-20j1.5 1 2 - - - - - 1.000 - 1.000 -
3. hel_dr4 hel_dr4 12 2 - - - - - 1.000 - - 1.000
4. EGFR_1 EGFR_1 2 2 - - - - - 1.000 - 1.000 -
5. si:ch211-220f16.1 ENSDARG00000093977 4 2 - - - - - - - 1.000 1.000 si:ch211-220f16.1 [Source:ZFIN;Acc:ZDB-GENE-070912-198]
6. si:ch73-335d12.1 si:ch73-335d12.1 1 2 - - - - 1.000 1.000 - - -
7. BX000442.2 BX000442.2 8 2 - - - - 1.000 - - - 1.000
8. si:dkey-265e15.2 ENSDARG00000089582, ENSDARG00000113391 1 1.935 - - 0.935 - - - - - 1.000 si:dkey-265e15.2 [Source:ZFIN;Acc:ZDB-GENE-081103-3]
9. HTRA2_11 HTRA2_11 2 1.935 - - 0.935 - - - - 1.000 -
10. si:ch211-122l14.7 ENSDARG00000095576 5 1.897 - - - - - 1.000 - 0.897 - si:ch211-122l14.7 [Source:ZFIN;Acc:ZDB-GENE-041014-263]
11. akap1a ENSDARG00000089802 5 1.856 - - 0.856 - - - - 1.000 - A kinase (PRKA) anchor protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-5980]
12. OVGP1 ENSDARG00000075745 6 1.826 - - - - 1.000 0.826 - - - oviductal glycoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-140106-118]
13. si:dkey-250k15.4 ENSDARG00000092169 19 1.811 - - - - 0.811 1.000 - - - si:dkey-250k15.4 [Source:ZFIN;Acc:ZDB-GENE-100922-254]
14. CU694320.1 CU694320.1 6 1.78 - - 0.780 - - - - - 1.000
15. htr2a htr2a 1 1.723 - - - - 0.723 - - - 1.000
16. si:dkey-179k24.3 si:dkey-179k24.3 3 1.71 - - - - 1.000 0.710 - - -
17. si:dkey-199m13.1 si:dkey-199m13.1 3 1.71 - - - - - - - 0.710 1.000
18. zgc:152951 ENSDARG00000068663, ENSDARG00000113135 22 1.702 - - 0.823 - - 0.879 - - - zgc:152951 [Source:ZFIN;Acc:ZDB-GENE-060929-416]
19. ENDOD1_6 ENDOD1_6 2 1 - - - - 1.000 - - - -
20. si:dkey-14d8.1 ENSDARG00000095332 11 1 - - - - - 1.000 - - - si:dkey-14d8.1 [Source:ZFIN;Acc:ZDB-GENE-041210-86]
21. cd44a ENSDARG00000087863 4 1 - - - - 1.000 - - - - CD44 molecule (Indian blood group) a [Source:ZFIN;Acc:ZDB-GENE-110429-1]
22. sp2 ENSDARG00000076763, ENSDARG00000113443, ENSDARG00000115477 20 1 - - - - - 1.000 - - - sp2 transcription factor [Source:ZFIN;Acc:ZDB-GENE-080410-1]
23. BX324003.4 BX324003.4 24 1 - - - - - - - - 1.000
24. zgc:173603 zgc:173603 2 1 - - - - - - - - 1.000
25. cart2 ENSDARG00000045832, ENSDARG00000112535 13 1 - - - - 1.000 - - - - cocaine- and amphetamine-regulated transcript 2 [Source:ZFIN;Acc:ZDB-GENE-050417-23]
26. KSR1_1 KSR1_1 1 1 - - - - - - - - 1.000
27. CT867973.1 ENSDARG00000114801 13 1 - - - - - - - 1.000 -
28. tsen54 ENSDARG00000036844 11 1 - - - - - - - 1.000 - TSEN54 tRNA splicing endonuclease subunit [Source:ZFIN;Acc:ZDB-GENE-050522-454]
29. fgf14 ENSDARG00000040982 5 1 - - - - - - - 1.000 - fibroblast growth factor 14 [Source:ZFIN;Acc:ZDB-GENE-060506-1]
30. si:ch211-225h9.2 si:ch211-225h9.2 16 1 - - - - - 1.000 - - -
31. VWDE ENSDARG00000103443 10 1 - - - - - - - - 1.000 von Willebrand factor D and EGF domains [Source:ZFIN;Acc:ZDB-GENE-060929-1226]
32. CR847844.3 CR847844.3 1 1 - - - - - 1.000 - - -
33. apex2 ENSDARG00000008472 39 1 - - - - - 1.000 - - - APEX nuclease (apurinic/apyrimidinic endonuclease) 2 [Source:ZFIN;Acc:ZDB-GENE-040426-835]
34. gh1 ENSDARG00000038185 1 1 - - - - - - - - 1.000 growth hormone 1 [Source:ZFIN;Acc:ZDB-GENE-030725-2]
35. MFN1 ENSDARG00000011884 1 1 - - - - 1.000 - - - - mitofusin 1 [Source:HGNC Symbol;Acc:HGNC:18262]
36. si:dkey-211i20.3 si:dkey-211i20.3 1 1 - - - - - - - - 1.000
37. pou1f1 ENSDARG00000058924, ENSDARG00000110816, ENSDARG00000115109 17 1 - - - - - - - - 1.000 POU class 1 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040630-7]
38. abcc5 ENSDARG00000061233 60 1 - - - - - 1.000 - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 5 [Source:ZFIN;Acc:ZDB-GENE-050517-17]
39. si:dkey-11n6.3 si:dkey-11n6.3 1 1 - - - - - - - - 1.000
40. or115-8 ENSDARG00000092406 1 1 - - - - - - - - 1.000 odorant receptor, family F, subfamily 115, member 8 [Source:ZFIN;Acc:ZDB-GENE-070806-10]
41. CR848032.2 CR848032.2 0 1 - - - - - - - - 1.000
42. si:dkey-233h12.3 si:dkey-233h12.3 4 1 - - - - - - - - 1.000
43. mtmr10 ENSDARG00000010601 37 1 - - - - - 1.000 - - - myotubularin related protein 10 [Source:ZFIN;Acc:ZDB-GENE-061103-52]
44. ntsr1 ENSDARG00000077577, ENSDARG00000112950 14 1 - - - - - 1.000 - - - neurotensin receptor 1 (high affinity) [Source:ZFIN;Acc:ZDB-GENE-090313-372]
45. si:ch211-255f4.4 si:ch211-255f4.4 0 1 - - - - - - - - 1.000
46. NEK11 ENSDARG00000087564 40 1 - - - - - - - 1.000 - NIMA-related kinase 11 [Source:ZFIN;Acc:ZDB-GENE-100922-73]
47. adarb1b ENSDARG00000003544 31 1 - - - - - 1.000 - - - adenosine deaminase, RNA-specific, B1b [Source:ZFIN;Acc:ZDB-GENE-030219-15]
48. gpat2 ENSDARG00000053575 12 1 - - - - - - - 1.000 - glycerol-3-phosphate acyltransferase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-050309-118]
49. si:ch73-116o1.3 si:ch73-116o1.3 1 1 - - - - 1.000 - - - -
50. si:dkey-208k22.1 si:dkey-208k22.1 1 1 - - - - - - - - 1.000
51. si:ch211-113a14.10 si:ch211-113a14.10 2 1 - - - - - - - - 1.000
52. socs4 ENSDARG00000078509 0 1 - - - - 1.000 - - - - suppressor of cytokine signaling 4 [Source:ZFIN;Acc:ZDB-GENE-070720-4]
53. BX927122.1 ENSDARG00000100571 0 1 - - - - - - - - 1.000
54. C12H17orf70 C12H17orf70 25 1 - - - - - 1.000 - - -
55. ZNF337 ZNF337 3 1 - - - - - 1.000 - - -
56. zp2.3 ENSDARG00000090237 45 1 - - - - - - - - 1.000 zona pellucida glycoprotein 2, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-010622-2]
57. zeb2b ENSDARG00000078416 23 1 - - - - 1.000 - - - - zinc finger E-box binding homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-080717-1]
58. adam10b ENSDARG00000015502 26 1 - - - - - - - 1.000 - ADAM metallopeptidase domain 10b [Source:ZFIN;Acc:ZDB-GENE-071115-1]
59. si:ch211-173n18.3 ENSDARG00000028478 8 1 - - - - - 1.000 - - - si:ch211-173n18.3 [Source:ZFIN;Acc:ZDB-GENE-120215-62]
60. mir125a-1 2 1 - - - - 1.000 - - - - microRNA 125a-1
61. SNTB2 ENSDARG00000051763 2 1 - - - - - 1.000 - - - syntrophin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-131121-511]
62. CABZ01079804.1 ENSDARG00000117619 1 1 - - - - - 1.000 - - -
63. UBE2O 1 1 - - - - - - - - 1.000 ubiquitin-conjugating enzyme E2O
64. pkz ENSDARG00000052396 2 1 - - - - - - - 1.000 - protein kinase containing Z-DNA binding domains [Source:ZFIN;Acc:ZDB-GENE-050301-2]
65. MFAP4_3 MFAP4_3 7 1 - - - - 1.000 - - - -
66. PEG3_34 PEG3_34 0 1 - - - - - 1.000 - - -
67. CABZ01088134.1 ENSDARG00000033587 4 1 - - - - 1.000 - - - - enoyl-[acyl-carrier-protein] reductase, mitochondrial-like [Source:NCBI gene;Acc:101884755]
68. BX569793.1 ENSDARG00000096832 0 1 - - - - - 1.000 - - -
69. tk1 ENSDARG00000102245 1 1 - - - - 1.000 - - - - thymidine kinase 1, soluble [Source:ZFIN;Acc:ZDB-GENE-030131-5801]
70. syne2a_1 0 1 - - - - - - - - 1.000 spectrin repeat containing, nuclear envelope 2a
71. BX571969.1 BX571969.1 8 1 - - - - - 1.000 - - -
72. napgl napgl 39 1 - - - - - 1.000 - - -
73. CR942805.1 CR942805.1 94 1 - - - - - - - - 1.000
74. sdhaf1 ENSDARG00000092478 51 1 - - - - - 1.000 - - - succinate dehydrogenase complex assembly factor 1 [Source:ZFIN;Acc:ZDB-GENE-050809-56]
75. si:ch211-173m16.2 ENSDARG00000093284 186 1 - - - - - 1.000 - - - si:ch211-173m16.2 [Source:ZFIN;Acc:ZDB-GENE-070912-155]
76. ENSDARG00000086666 ENSDARG00000086666 2159 1 - - - - - 1.000 - - -
77. zgc:136902 zgc:136902 4 1 - - - - - 1.000 - - -
78. dnmt3aa ENSDARG00000005394 63 1 - - - - - 1.000 - - - DNA (cytosine-5-)-methyltransferase 3 alpha a [Source:ZFIN;Acc:ZDB-GENE-050314-5]
79. TMEM81 TMEM81 0 1 - - - - 1.000 - - - -
80. ei24 ENSDARG00000053840 78 1 - - - - - 1.000 - - - etoposide induced 2.4 [Source:ZFIN;Acc:ZDB-GENE-050417-457]
81. rfx3 ENSDARG00000014550 2 1 - - - - 1.000 - - - - regulatory factor X, 3 (influences HLA class II expression) [Source:ZFIN;Acc:ZDB-GENE-061103-253]
82. mirlet7b 0 1 - - - - 1.000 - - - - microRNA let7b
83. CU638740.4 CU638740.4 1 1 - - - - - - - - 1.000
84. si:ch73-341k19.1 ENSDARG00000095946 5 1 - - - - - 1.000 - - - si:ch73-341k19.1 [Source:ZFIN;Acc:ZDB-GENE-110411-201]
85. spata7 ENSDARG00000075898 16 1 - - - - - - - 1.000 - spermatogenesis associated 7 [Source:ZFIN;Acc:ZDB-GENE-050419-61]
86. si:dkey-13i19.10 si:dkey-13i19.10 2 1 - - - - 1.000 - - - -
87. si:ch211-196c10.8 si:ch211-196c10.8 19 1 - - - - - - - 1.000 -
88. BX569789.5 BX569789.5 0 1 - - - - 1.000 - - - -
89. BX088525.2 ENSDARG00000117222 11 1 - - - - - - - - 1.000
90. ENSDARG00000091642 ENSDARG00000091642 14 1 - - - - - 1.000 - - -
91. ttc39a ENSDARG00000074126 7 1 - - - - 1.000 - - - - tetratricopeptide repeat domain 39A [Source:ZFIN;Acc:ZDB-GENE-091116-42]
92. fam196ab 2 1 - - - - - - - - 1.000 family with sequence similarity 196, member Ab
93. si:ch211-207o17.8 si:ch211-207o17.8 1 1 - - - - - 1.000 - - -
94. si:ch211-89f22.1 si:ch211-89f22.1 11 1 - - - - - - - - 1.000
95. si:ch211-1f22.4 si:ch211-1f22.4 2 1 - - - - 1.000 - - - -
96. ptpn20 ENSDARG00000075459 1 1 - - - - - 1.000 - - - protein tyrosine phosphatase, non-receptor type 20 [Source:ZFIN;Acc:ZDB-GENE-090313-90]
97. zgc:195633_1 142 1 - - - - - 1.000 - - - zgc:195633
98. fbxl8 ENSDARG00000054222 3 1 - - - - 1.000 - - - - F-box and leucine-rich repeat protein 8 [Source:ZFIN;Acc:ZDB-GENE-051120-81]
99. si:dkey-47k16.1 si:dkey-47k16.1 5 1 - - - - - - - - 1.000
100. CLTCL1_2 CLTCL1_2 1 1 - - - - - - - - 1.000

There are 637 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA