Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-93m18.5

Gene Name Gene ID Reads Annotation
si:dkey-93m18.5 si:dkey-93m18.5 2










Genes with expression patterns similar to si:dkey-93m18.5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-93m18.5 si:dkey-93m18.5 2 4 - - 1.000 - 1.000 1.000 - - 1.000
2. GPT GPT 2 2 - - 1.000 - - - - - 1.000
3. si:dkey-188i13.8 ENSDARG00000092725 1 2 - - - - - 1.000 - - 1.000 si:dkey-188i13.8 [Source:ZFIN;Acc:ZDB-GENE-090312-93]
4. or131-2 ENSDARG00000073812 0 2 - - 1.000 - - - - - 1.000 odorant receptor, family H, subfamily 131, member 2 [Source:ZFIN;Acc:ZDB-GENE-070806-46]
5. scn1a 8 2 - - - - - 1.000 - - 1.000 sodium channel, voltage-gated, type I, alpha, transcript variant X1
6. slc18a2 ENSDARG00000015110, ENSDARG00000115207 6 2 - - - - - 1.000 - - 1.000 solute carrier family 18 (vesicular monoamine transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-080514-1]
7. BX321870.1 ENSDARG00000098519 9 2 - - - - - 1.000 - - 1.000
8. U1_46 U1_46 1 2 - - 1.000 - 1.000 - - - -
9. si:dkey-4j21.1 17 2 - - - - - 1.000 - - 1.000 si:dkey-4j21.1, transcript variant X2
10. si:ch211-113a14.19_1 ENSDARG00000109926, ENSDARG00000111536, ENSDARG00000113481, ENSDARG00000113707, ENSDARG00000115875 15 1.983 - - - - 0.983 - - - 1.000 si:ch211-113a14.19 [Source:ZFIN;Acc:ZDB-GENE-121214-198]
11. SLC39A11 ENSDARG00000098194 23 1.969 - - - - 0.969 1.000 - - - solute carrier family 39 member 11 [Source:HGNC Symbol;Acc:HGNC:14463]
12. si:dkeyp-107f9.4 ENSDARG00000104468 11 1.964 - - - - 0.964 1.000 - - - si:dkeyp-107f9.4 [Source:ZFIN;Acc:ZDB-GENE-120709-91]
13. tmem168b ENSDARG00000062168 17 1.797 - - - - - 1.000 - - 0.797 transmembrane protein 168b [Source:ZFIN;Acc:ZDB-GENE-090406-3]
14. si:dkey-25i10.5 si:dkey-25i10.5 18 1.779 - - 0.779 - - 1.000 - - -
15. si:dkey-32n7.4 ENSDARG00000002956 3 1.758 - - - - 0.758 1.000 - - - si:dkey-32n7.4 [Source:ZFIN;Acc:ZDB-GENE-110411-175]
16. cyp2n13 ENSDARG00000042953 10 1.753 - - 0.753 - - - - - 1.000 cytochrome P450, family 2, subfamily N, polypeptide 13 [Source:ZFIN;Acc:ZDB-GENE-041001-158]
17. SNORA81_1 SNORA81_1 8 1.72 - - - - 0.720 1.000 - - -
18. ccna1 ENSDARG00000043236 13 1.509 - - 0.767 - - 0.742 - - - cyclin A1 [Source:ZFIN;Acc:ZDB-GENE-040311-2]
19. apba2b ENSDARG00000060639 2 1 - - - - - 1.000 - - - amyloid beta (A4) precursor protein-binding, family A, member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5371]
20. ptk6b ENSDARG00000059956 44 1 - - - - 1.000 - - - - PTK6 protein tyrosine kinase 6b [Source:ZFIN;Acc:ZDB-GENE-060929-1150]
21. kcne4 ENSDARG00000068257 13 1 - - - - - 1.000 - - - potassium voltage-gated channel, Isk-related family, member 4 [Source:ZFIN;Acc:ZDB-GENE-050419-163]
22. si:dkey-228d14.8 si:dkey-228d14.8 3 1 - - 1.000 - - - - - -
23. mir142a 20 1 - - - - - 1.000 - - - microRNA 142a
24. or111-2 ENSDARG00000025658 2 1 - - - - - 1.000 - - - odorant receptor, family D, subfamily 111, member 2 [Source:ZFIN;Acc:ZDB-GENE-010308-19]
25. tmem232 ENSDARG00000067646 4 1 - - - - - 1.000 - - - transmembrane protein 232 [Source:ZFIN;Acc:ZDB-GENE-070705-434]
26. gria3b ENSDARG00000037498, ENSDARG00000111839 2 1 - - - - - - - - 1.000 glutamate receptor, ionotropic, AMPA 3b [Source:ZFIN;Acc:ZDB-GENE-030616-53]
27. si:ch1073-351l9.1 si:ch1073-351l9.1 1 1 - - - - - - - - 1.000
28. U6_12 U6_12 0 1 - - - - - 1.000 - - -
29. NPM2 NPM2 41 1 - - - - - - - - 1.000
30. c1ql3b_1 ENSDARG00000028521, ENSDARG00000036483 16 1 - - - - - 1.000 - - - complement component 1, q subcomponent-like 3b [Source:ZFIN;Acc:ZDB-GENE-040426-1836]
31. FETUB ENSDARG00000053973 4 1 - - 1.000 - - - - - - fetuin B [Source:ZFIN;Acc:ZDB-GENE-050208-4]
32. FJX1 ENSDARG00000035873 22 1 - - - - - - - - 1.000 four jointed box 1 [Source:ZFIN;Acc:ZDB-GENE-100422-10]
33. si:ch73-341k19.1 ENSDARG00000095946 5 1 - - - - - - - - 1.000 si:ch73-341k19.1 [Source:ZFIN;Acc:ZDB-GENE-110411-201]
34. BX682558.1 ENSDARG00000101975 30 1 - - - - - 1.000 - - - si: dkey-225f5.4 [Source:NCBI gene;Acc:100000219]
35. si:dkeyp-13d11.2 79 1 - - - - - 1.000 - - - si:dkeyp-13d11.2
36. si:ch211-198e13.3 5 1 - - - - - - - - 1.000 si:ch211-198e13.3, transcript variant X1
37. tnni1b ENSDARG00000052708 478 1 - - - - - 1.000 - - - troponin I type 1b (skeletal, slow) [Source:ZFIN;Acc:ZDB-GENE-041212-37]
38. CABZ01056274.1 CABZ01056274.1 3 1 - - - - - - - - 1.000
39. tusc3 ENSDARG00000078854 4 1 - - - - - - - - 1.000 tumor suppressor candidate 3 [Source:ZFIN;Acc:ZDB-GENE-050522-381]
40. mpp5b ENSDARG00000004721 0 1 - - - - - 1.000 - - - membrane protein, palmitoylated 5b (MAGUK p55 subfamily member 5) [Source:ZFIN;Acc:ZDB-GENE-060531-2]
41. grid2 ENSDARG00000055302, ENSDARG00000110593 1 1 - - - - - - - - 1.000 glutamate receptor, ionotropic, delta 2 [Source:ZFIN;Acc:ZDB-GENE-040913-1]
42. grin2cb ENSDARG00000077560 9 1 - - - - - - - - 1.000 glutamate receptor, ionotropic, N-methyl D-aspartate 2Cb [Source:ZFIN;Acc:ZDB-GENE-100308-2]
43. CALN1 ENSDARG00000088898 114 1 - - - - - 1.000 - - - calneuron 1 [Source:ZFIN;Acc:ZDB-GENE-130313-1]
44. ptger2a ENSDARG00000011434 6 1 - - - - - - - - 1.000 prostaglandin E receptor 2a (subtype EP2) [Source:ZFIN;Acc:ZDB-GENE-040426-1321]
45. si:dkey-285e18.3 si:dkey-285e18.3 10 1 - - - - - 1.000 - - -
46. zgc:165539 ENSDARG00000027639 20 1 - - - - - 1.000 - - - zgc:165539 [Source:ZFIN;Acc:ZDB-GENE-030131-5478]
47. CR356223.1 ENSDARG00000093865 1 1 - - - - - - - - 1.000
48. zgc:153499 ENSDARG00000070166 8 1 - - 1.000 - - - - - - zgc:153499 [Source:ZFIN;Acc:ZDB-GENE-060825-234]
49. PLA2G4C_1 PLA2G4C_1 2 1 - - - - - - - - 1.000
50. si:ch211-145h19.4 si:ch211-145h19.4 1 1 - - - - - - - - 1.000
51. si:ch73-177h5.2 ENSDARG00000020812 0 1 - - - - - - - - 1.000 si:ch73-177h5.2 [Source:ZFIN;Acc:ZDB-GENE-081104-247]
52. CYP27A1_2 CYP27A1_2 5 1 - - - - - - - - 1.000
53. agfg1a ENSDARG00000030020 6 1 - - - - - 1.000 - - - ArfGAP with FG repeats 1a [Source:ZFIN;Acc:ZDB-GENE-030131-5808]
54. rab14l ENSDARG00000035188 18 1 - - - - - 1.000 - - - RAB14, member RAS oncogene family, like [Source:ZFIN;Acc:ZDB-GENE-040426-1207]
55. si:ch211-160j14.4 si:ch211-160j14.4 0 1 - - 1.000 - - - - - -
56. HMGXB3 ENSDARG00000077823 2 1 - - - - - - - - 1.000 HMG box domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-111012-1]
57. esr2b ENSDARG00000034181 20 1 - - - - - 1.000 - - - estrogen receptor 2b [Source:ZFIN;Acc:ZDB-GENE-030116-1]
58. ubb ENSDARG00000093313, ENSDARG00000112953 4 1 - - - - - - - - 1.000 ubiquitin B [Source:ZFIN;Acc:ZDB-GENE-050411-10]
59. TTC29 ENSDARG00000058885, ENSDARG00000112776 1 1 - - - - - 1.000 - - - tetratricopeptide repeat domain 29 [Source:ZFIN;Acc:ZDB-GENE-100922-181]
60. CABZ01079981.1 CABZ01079981.1 8 1 - - - - - 1.000 - - -
61. GARNL3 GARNL3 1 1 - - - - - 1.000 - - -
62. ggcta ENSDARG00000076406 33 1 - - - - - 1.000 - - - gamma-glutamylcyclotransferase a [Source:ZFIN;Acc:ZDB-GENE-081104-129]
63. dnaaf3 ENSDARG00000092662 20 1 - - - - - 1.000 - - - dynein, axonemal, assembly factor 3 [Source:ZFIN;Acc:ZDB-GENE-091204-296]
64. CR318624.1 ENSDARG00000094618 5 1 - - - - - - - - 1.000
65. wu:fb37b09 wu:fb37b09 10685 1 - - - - - 1.000 - - -
66. si:dkey-76k16.5 ENSDARG00000075561 1 1 - - - - 1.000 - - - - si:dkey-76k16.5 [Source:ZFIN;Acc:ZDB-GENE-090313-330]
67. SBSPON ENSDARG00000110160 2 1 - - - - - 1.000 - - - somatomedin B and thrombospondin type 1 domain containing [Source:HGNC Symbol;Acc:HGNC:30362]
68. RGS9BP ENSDARG00000086756 65 1 - - 1.000 - - - - - - regulator of G protein signaling 9 binding protein [Source:HGNC Symbol;Acc:HGNC:30304]
69. si:dkey-199k11.5 si:dkey-199k11.5 4 1 - - - - - - - - 1.000
70. si:ch211-197g22.1 si:ch211-197g22.1 1 1 - - - - - - - - 1.000
71. GLRA2 ENSDARG00000075012, ENSDARG00000114839 0 1 - - - - - - - - 1.000 glycine receptor, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-090407-1]
72. bmp1b ENSDARG00000028053 25 1 - - - - - 1.000 - - - bone morphogenetic protein 1b [Source:ZFIN;Acc:ZDB-GENE-060818-2]
73. cacna1f cacna1f 1 1 - - - - - 1.000 - - -
74. si:dkey-24i24.3 ENSDARG00000088452 27 1 - - - - - 1.000 - - - si:dkey-24i24.3 [Source:ZFIN;Acc:ZDB-GENE-110411-103]
75. wisp2 ENSDARG00000077882 3 1 - - - - - - - - 1.000 WNT1 inducible signaling pathway protein 2 [Source:ZFIN;Acc:ZDB-GENE-060223-1]
76. CR376751.1 ENSDARG00000076901 1 1 - - - - 1.000 - - - -
77. si:ch211-254p10.3 si:ch211-254p10.3 5 1 - - - - - 1.000 - - -
78. zgc:123068 ENSDARG00000017489 15 1 - - - - - 1.000 - - - zgc:123068 [Source:ZFIN;Acc:ZDB-GENE-051030-98]
79. morc3b ENSDARG00000043271 8 1 - - 1.000 - - - - - - MORC family CW-type zinc finger 3b [Source:ZFIN;Acc:ZDB-GENE-040801-98]
80. si:ch211-234c11.2 ENSDARG00000093041, ENSDARG00000109255 1 1 - - 1.000 - - - - - - si:ch211-234c11.2 [Source:ZFIN;Acc:ZDB-GENE-110914-70]
81. si:dkey-149m13.2 si:dkey-149m13.2 1 1 - - - - - - - - 1.000
82. nceh1a ENSDARG00000020427 35 1 - - - - - 1.000 - - - neutral cholesterol ester hydrolase 1a [Source:ZFIN;Acc:ZDB-GENE-040711-2]
83. gba ENSDARG00000076058 1 1 - - - - - - - - 1.000 glucosidase, beta, acid [Source:ZFIN;Acc:ZDB-GENE-100922-270]
84. CABZ01079442.1 CABZ01079442.1 1 1 - - 1.000 - - - - - -
85. zgc:136254 ENSDARG00000068465 27 1 - - - - - 1.000 - - - zgc:136254 [Source:ZFIN;Acc:ZDB-GENE-060421-3062]
86. si:ch211-253d24.2 si:ch211-253d24.2 12 1 - - - - - 1.000 - - -
87. AC024175.21 AC024175.21 10 1 - - - - - 1.000 - - -
88. IMPG2_1 IMPG2_1 2 1 - - - - - 1.000 - - -
89. slc6a15 ENSDARG00000062821, ENSDARG00000109790, ENSDARG00000114469 5 1 - - - - 1.000 - - - - solute carrier family 6 (neutral amino acid transporter), member 15 [Source:ZFIN;Acc:ZDB-GENE-050420-93]
90. si:dkey-25o1.6 si:dkey-25o1.6 5 1 - - - - - - - - 1.000
91. RBM11 ENSDARG00000090202 15 1 - - - - - 1.000 - - - RNA binding motif protein 11 [Source:ZFIN;Acc:ZDB-GENE-091204-317]
92. aqp9b ENSDARG00000053480 16 1 - - - - - 1.000 - - - aquaporin 9b [Source:ZFIN;Acc:ZDB-GENE-070911-1]
93. BX530066.1 BX530066.1 42 1 - - - - - 1.000 - - -
94. si:ch211-233m11.1 ENSDARG00000074653 1 1 - - - - - - - - 1.000 si:ch211-233m11.1 [Source:ZFIN;Acc:ZDB-GENE-081028-16]
95. itln1 ENSDARG00000007534 8 1 - - - - - 1.000 - - - intelectin 1 [Source:ZFIN;Acc:ZDB-GENE-060929-564]
96. mybpc2a ENSDARG00000030157 11 1 - - - - - - - - 1.000 myosin binding protein C, fast type a [Source:ZFIN;Acc:ZDB-GENE-060901-1]
97. gata2b ENSDARG00000009094 16 1 - - - - - 1.000 - - - GATA binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-040718-440]
98. LOXL2 LOXL2 2 1 - - - - - 1.000 - - -
99. si:dkey-114b16.4 si:dkey-114b16.4 35 1 - - - - - 1.000 - - -
100. ACTN4_2 ACTN4_2 1 1 - - - - 1.000 - - - -

There are 480 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA