Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-93h22.6

Gene Name Gene ID Reads Annotation
si:dkey-93h22.6 si:dkey-93h22.6 7










Genes with expression patterns similar to si:dkey-93h22.6

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-93h22.6 si:dkey-93h22.6 7 7 1.000 1.000 1.000 1.000 1.000 - - 1.000 1.000
2. hcst ENSDARG00000092074 172 1.922 0.922 1.000 - - - - - - - hematopoietic cell signal transducer [Source:ZFIN;Acc:ZDB-GENE-061130-1]
3. ncf4 ENSDARG00000040812, ENSDARG00000110339 45 1.892 0.892 1.000 - - - - - - - neutrophil cytosolic factor 4 [Source:ZFIN;Acc:ZDB-GENE-041124-1]
4. sst2 ENSDARG00000014190 617 1.892 0.892 1.000 - - - - - - - somatostatin 2 [Source:ZFIN;Acc:ZDB-GENE-010219-2]
5. BX548000.1 ENSDARG00000099044 45 1.892 0.892 1.000 - - - - - - -
6. C11H1orf116 C11H1orf116 9 1.892 0.892 - - - 1.000 - - - -
7. st8sia1_1 ENSDARG00000098221 16 1.804 - 1.000 - - - - - 0.804 - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-051005-1]
8. zgc:173713 17 1.792 0.792 1.000 - - - - - - - zgc:173713, transcript variant X2
9. adrb1_1 ENSDARG00000007490, ENSDARG00000115574 9 1.791 - 1.000 - - 0.791 - - - - adrenoceptor beta 1 [Source:ZFIN;Acc:ZDB-GENE-081022-145]
10. NPPC_1 NPPC_1 11 1.775 - 0.881 0.894 - - - - - -
11. si:ch211-274k16.4 si:ch211-274k16.4 6 1.775 - - - - 0.830 - - - 0.945
12. ACTR3_1 ACTR3_1 2 1.747 - 1.000 0.747 - - - - - -
13. PHYH ENSDARG00000086740 15 1.747 - 1.000 0.747 - - - - - - phytanoyl-CoA 2-hydroxylase [Source:ZFIN;Acc:ZDB-GENE-050417-361]
14. lamb1a_1 ENSDARG00000101209 13 1.722 0.892 - - - 0.830 - - - - laminin, beta 1a [Source:ZFIN;Acc:ZDB-GENE-021226-1]
15. si:dkey-114c15.5 ENSDARG00000095150 70 1.704 1.000 0.704 - - - - - - - si:dkey-114c15.5 [Source:ZFIN;Acc:ZDB-GENE-060531-72]
16. pls1 ENSDARG00000039272 39 1.679 - - 0.747 - - - - - 0.932 plastin 1 (I isoform) [Source:ZFIN;Acc:ZDB-GENE-030131-6205]
17. fnbp1 fnbp1 5 1.674 0.892 - - 0.782 - - - - -
18. CABZ01071446.1 CABZ01071446.1 4 1.631 0.801 - - - 0.830 - - - -
19. syk ENSDARG00000008186 24 1.622 0.792 - - - 0.830 - - - - spleen tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-040702-3]
20. SLC22A14 SLC22A14 24 1.611 0.892 - - - - - - 0.719 -
21. crybb1l2 ENSDARG00000016793 723 1.61 0.892 - - - 0.718 - - - - crystallin, beta B1, like 2 [Source:ZFIN;Acc:ZDB-GENE-070822-18]
22. SPAG17 SPAG17 31 1.607 0.825 - - 0.782 - - - - -
23. csf2rb ENSDARG00000076586, ENSDARG00000112627, ENSDARG00000114668 9 1.574 0.792 - - 0.782 - - - - - colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage) [Source:ZFIN;Acc:ZDB-GENE-080115-1]
24. zgc:153921 ENSDARG00000020738, ENSDARG00000038405 34 1.542 - - - - - - - 0.783 0.759 zgc:153921 [Source:ZFIN;Acc:ZDB-GENE-060929-816]
25. CABZ01086801.1 CABZ01086801.1 41 1.542 - 0.704 - - - - - - 0.838
26. AL929220.1 ENSDARG00000103323 14 1.523 0.741 - - 0.782 - - - - -
27. uckl1a ENSDARG00000001686 21 1 - 1.000 - - - - - - - uridine-cytidine kinase 1-like 1a [Source:ZFIN;Acc:ZDB-GENE-040724-238]
28. cpeb1b ENSDARG00000008454 37 1 - 1.000 - - - - - - - cytoplasmic polyadenylation element binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-990927-1]
29. KCNAB2 KCNAB2 129 1 - 1.000 - - - - - - -
30. MCOLN2 ENSDARG00000098918 12 1 - - - - - - - - 1.000 mucolipin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-692]
31. KCNS3 KCNS3 82 1 - 1.000 - - - - - - -
32. casp6 ENSDARG00000093405, ENSDARG00000115863 11 1 - 1.000 - - - - - - - caspase 6, apoptosis-related cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-030825-4]
33. si:ch211-204c5.6 si:ch211-204c5.6 7 1 - 1.000 - - - - - - -
34. PLCXD1_3 PLCXD1_3 35 1 - 1.000 - - - - - - -
35. otpb ENSDARG00000058379 1143 1 - 1.000 - - - - - - - orthopedia homeobox b [Source:ZFIN;Acc:ZDB-GENE-990708-7]
36. USP43 USP43 14 1 - 1.000 - - - - - - -
37. RNF214_1 RNF214_1 5 1 - 1.000 - - - - - - -
38. AL935186.3 ENSDARG00000109223 19 1 - 1.000 - - - - - - -
39. C5H11orf53 C5H11orf53 3 1 - - - - - - - 1.000 -
40. rereb ENSDARG00000075670 136 1 - 1.000 - - - - - - - arginine-glutamic acid dipeptide (RE) repeats b [Source:ZFIN;Acc:ZDB-GENE-070212-3]
41. pvrl4 155 1 - 1.000 - - - - - - - poliovirus receptor-related 4
42. tbc1d9 ENSDARG00000043627, ENSDARG00000059900 3 1 - - - - - - - 1.000 - TBC1 domain family, member 9 (with GRAM domain) [Source:ZFIN;Acc:ZDB-GENE-060810-33]
43. si:ch211-150o23.4 si:ch211-150o23.4 7 1 - 1.000 - - - - - - -
44. porcn ENSDARG00000052558, ENSDARG00000111556 110 1 - 1.000 - - - - - - - porcupine O-acyltransferase [Source:ZFIN;Acc:ZDB-GENE-081105-87]
45. zgc:113691 ENSDARG00000038898 36 1 - 1.000 - - - - - - - zgc:113691 [Source:ZFIN;Acc:ZDB-GENE-050220-7]
46. NPAS3 ENSDARG00000109820 362 1 - 1.000 - - - - - - - neuronal PAS domain protein 3 [Source:HGNC Symbol;Acc:HGNC:19311]
47. nmbb ENSDARG00000077167, ENSDARG00000115224 45 1 - 1.000 - - - - - - - neuromedin Bb [Source:ZFIN;Acc:ZDB-GENE-081022-31]
48. U6_20 U6_20 0 1 - 1.000 - - - - - - -
49. si:ch211-207c6.4 si:ch211-207c6.4 7 1 - 1.000 - - - - - - -
50. si:dkey-200l5.4 ENSDARG00000095294 13 1 - 1.000 - - - - - - - si:dkey-200l5.4 [Source:ZFIN;Acc:ZDB-GENE-091204-393]
51. U6_32 U6_32 0 1 - 1.000 - - - - - - -
52. zgc:110434 21 1 - 1.000 - - - - - - - zgc:110434
53. abcc6a ENSDARG00000016750 10 1 - 1.000 - - - - - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 6a [Source:ZFIN;Acc:ZDB-GENE-050517-18]
54. CLSTN2 ENSDARG00000060637 41 1 - 1.000 - - - - - - - calsyntenin 2 [Source:ZFIN;Acc:ZDB-GENE-070911-2]
55. si:dkey-119g10.4 si:dkey-119g10.4 7 1 - 1.000 - - - - - - -
56. klf5b ENSDARG00000062106 7 1 - 1.000 - - - - - - - Kruppel-like factor 5b [Source:ZFIN;Acc:ZDB-GENE-080424-4]
57. AGAP3_1 AGAP3_1 18 1 - - - - - - - 1.000 -
58. kcnc2 ENSDARG00000057468 12 1 - 1.000 - - - - - - - potassium voltage-gated channel, Shaw-related subfamily, member 2 [Source:ZFIN;Acc:ZDB-GENE-070410-118]
59. si:dkey-228d14.8 si:dkey-228d14.8 3 1 - - - - - - - - 1.000
60. syt9b ENSDARG00000029239 31 1 - 1.000 - - - - - - - synaptotagmin IXb [Source:ZFIN;Acc:ZDB-GENE-040822-6]
61. tecrl2 tecrl2 11 1 - 1.000 - - - - - - -
62. RHBDF1 RHBDF1 131 1 1.000 - - - - - - - -
63. si:ch73-141f17.1 si:ch73-141f17.1 1 1 - 1.000 - - - - - - -
64. GTPBP6 ENSDARG00000061091 29 1 - 1.000 - - - - - - - GTP binding protein 6 (putative) [Source:ZFIN;Acc:ZDB-GENE-031118-62]
65. her3 ENSDARG00000076857 131 1 - 1.000 - - - - - - - hairy-related 3 [Source:ZFIN;Acc:ZDB-GENE-980526-204]
66. PEG3_37 PEG3_37 4 1 - 1.000 - - - - - - -
67. zgc:195195 zgc:195195 6 1 - 1.000 - - - - - - -
68. CLDN20 26 1 - 1.000 - - - - - - - claudin 20, transcript variant X2
69. CU633486.1 ENSDARG00000098008 3 1 - - - - 1.000 - - - -
70. zgc:153654 ENSDARG00000060322 9 1 - 1.000 - - - - - - - zgc:153654 [Source:ZFIN;Acc:ZDB-GENE-060929-1102]
71. si:ch73-166n24.2 si:ch73-166n24.2 1 1 - 1.000 - - - - - - -
72. tekt1 ENSDARG00000101331 27 1 - 1.000 - - - - - - - tektin 1 [Source:ZFIN;Acc:ZDB-GENE-041114-99]
73. zeb2b ENSDARG00000078416 23 1 - 1.000 - - - - - - - zinc finger E-box binding homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-080717-1]
74. ECM1_1 ECM1_1 4 1 - - - - - - - 1.000 -
75. TRIM35_5 TRIM35_5 1 1 - - - - - - - 1.000 -
76. tmem91 ENSDARG00000068456 81 1 - 1.000 - - - - - - - transmembrane protein 91 [Source:ZFIN;Acc:ZDB-GENE-060503-581]
77. FRMPD1 34 1 - 1.000 - - - - - - - FERM and PDZ domain containing 1, transcript variant X3
78. camk1db ENSDARG00000017446 47 1 - 1.000 - - - - - - - calcium/calmodulin-dependent protein kinase 1Db [Source:ZFIN;Acc:ZDB-GENE-070112-1872]
79. fam219ab ENSDARG00000013813 591 1 - 1.000 - - - - - - - family with sequence similarity 219, member Ab [Source:ZFIN;Acc:ZDB-GENE-050522-213]
80. SCAMP5 SCAMP5 19 1 - 1.000 - - - - - - -
81. cyp2j20 ENSDARG00000094057 44 1 - 1.000 - - - - - - - cytochrome P450, family 2, subfamily J, polypeptide 20 [Source:ZFIN;Acc:ZDB-GENE-041210-324]
82. si:ch73-103b2.1 ENSDARG00000095944, ENSDARG00000099867 40 1 - 1.000 - - - - - - - si:ch73-103b2.1 [Source:ZFIN;Acc:ZDB-GENE-110408-42]
83. FAM179B FAM179B 0 1 - - - - - - - 1.000 -
84. ccdc14 ENSDARG00000098734 3 1 - 1.000 - - - - - - - coiled-coil domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-120215-134]
85. si:dkey-122c11.4 si:dkey-122c11.4 13 1 - 1.000 - - - - - - -
86. RIMS1 RIMS1 9 1 - 1.000 - - - - - - -
87. EML4 7 1 - - - - - - - 1.000 - echinoderm microtubule associated protein like 4
88. ADORA3 ENSDARG00000059899 5 1 - - - - - - - 1.000 - adenosine A3 receptor [Source:HGNC Symbol;Acc:HGNC:268]
89. zgc:165604 ENSDARG00000021241, ENSDARG00000116203 15 1 - 1.000 - - - - - - - zgc:165604 [Source:ZFIN;Acc:ZDB-GENE-070615-34]
90. SRCIN1 SRCIN1 5 1 - 1.000 - - - - - - -
91. si:dkey-42i9.8 ENSDARG00000071541 17 1 - 1.000 - - - - - - - si:dkey-42i9.8 [Source:ZFIN;Acc:ZDB-GENE-050208-412]
92. si:dkey-97l20.5 si:dkey-97l20.5 33 1 - 1.000 - - - - - - -
93. si:ch211-218c6.9 si:ch211-218c6.9 40 1 - 1.000 - - - - - - -
94. hsd17b1 ENSDARG00000027469 11 1 - - - - - - - 1.000 - hydroxysteroid (17-beta) dehydrogenase 1 [Source:ZFIN;Acc:ZDB-GENE-040901-5]
95. CDH8 172 1 - 1.000 - - - - - - - cadherin 8
96. si:ch211-113a14.15_1 2 1 - 1.000 - - - - - - - si:ch211-113a14.15
97. BX511021.2 ENSDARG00000097646 5 1 - - - - - - - - 1.000
98. mir29b-1 0 1 - 1.000 - - - - - - - microRNA 29b-1
99. ptf1a ENSDARG00000014479 349 1 - 1.000 - - - - - - - pancreas associated transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030616-579]
100. cdh10 cdh10 38 1 - 1.000 - - - - - - -

There are 1015 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA