Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-77p23.1

Gene Name Gene ID Reads Annotation
si:dkey-77p23.1 si:dkey-77p23.1 4










Genes with expression patterns similar to si:dkey-77p23.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-77p23.1 si:dkey-77p23.1 4 5 - - 1.000 1.000 1.000 1.000 - - 1.000
2. CU183952.2 CU183952.2 6 2 - - - 1.000 - 1.000 - - -
3. si:dkey-2j6.2 si:dkey-2j6.2 5 1.944 - - - 1.000 0.944 - - - -
4. CUZD1_2 CUZD1_2 1 1.933 - - 0.933 1.000 - - - - -
5. SLC16A7 ENSDARG00000098258 4 1.897 - - - 1.000 0.897 - - - - solute carrier family 16 member 7 [Source:HGNC Symbol;Acc:HGNC:10928]
6. si:ch211-196n4.9 si:ch211-196n4.9 1 1.854 - - - 1.000 - - - - 0.854
7. CABZ01073069.1 CABZ01073069.1 5 1.854 - - - 1.000 - - - - 0.854
8. sorl1 ENSDARG00000013892 13 1.854 - - - 1.000 - - - - 0.854 sortilin-related receptor, L(DLR class) A repeats containing [Source:ZFIN;Acc:ZDB-GENE-050208-22]
9. zgc:173713 17 1.844 - - - 1.000 - 0.844 - - - zgc:173713, transcript variant X2
10. grm3 ENSDARG00000031712, ENSDARG00000110535 30 1.822 - - 0.868 - - 0.954 - - - glutamate receptor, metabotropic 3 [Source:ZFIN;Acc:ZDB-GENE-061009-13]
11. si:ch211-287c22.2 si:ch211-287c22.2 1 1.787 - - 0.933 - - - - - 0.854
12. cyp2k19 ENSDARG00000101861 129 1.787 - - 0.933 - - - - - 0.854 cytochrome P450, family 2, subfamily k, polypeptide 19 [Source:ZFIN;Acc:ZDB-GENE-091211-1]
13. isg15 ENSDARG00000086374 8 1.77 - - 0.770 - - 1.000 - - - ISG15 ubiquitin-like modifier [Source:ZFIN;Acc:ZDB-GENE-021211-1]
14. si:rp71-1c10.11 ENSDARG00000096721 39 1.756 - - 0.933 - 0.823 - - - - si:rp71-1c10.11 [Source:ZFIN;Acc:ZDB-GENE-130603-61]
15. ETS1 ENSDARG00000024431 6 1.751 - - - - 0.897 - - - 0.854 v-ets avian erythroblastosis virus E26 oncogene homolog 1 [Source:ZFIN;Acc:ZDB-GENE-021115-5]
16. si:dkey-4c23.3 ENSDARG00000092028, ENSDARG00000110418 4 1.717 - - - 1.000 0.717 - - - - si:dkey-4c23.3 [Source:ZFIN;Acc:ZDB-GENE-050208-668]
17. bcan ENSDARG00000099412 18 1.687 - - - - 0.843 0.844 - - - brevican [Source:ZFIN;Acc:ZDB-GENE-030131-6045]
18. or109-11 ENSDARG00000105708 3 1.674 - - 0.933 - 0.741 - - - - odorant receptor, family D, subfamily 109, member 11 [Source:ZFIN;Acc:ZDB-GENE-070806-74]
19. CR376787.3 CR376787.3 11 1.66 - - 0.856 - - - - - 0.804
20. prodha ENSDARG00000086746 10 1.65 - - - - 0.897 - - - 0.753 proline dehydrogenase (oxidase) 1a [Source:ZFIN;Acc:ZDB-GENE-041008-73]
21. si:ch211-64i20.3 ENSDARG00000089934, ENSDARG00000105063 42 1.597 - - - - - 0.844 - - 0.753 si:ch211-64i20.3 [Source:ZFIN;Acc:ZDB-GENE-110913-55]
22. si:ch211-132g1.6 ENSDARG00000093102 13 1.574 - - 0.837 - - 0.737 - - - si:ch211-132g1.6 [Source:ZFIN;Acc:ZDB-GENE-091204-469]
23. gpr186 ENSDARG00000094860 53 1.57 - - 0.828 - - 0.742 - - - G protein-coupled receptor 186 [Source:ZFIN;Acc:ZDB-GENE-060503-489]
24. si:dkey-165i8.5 si:dkey-165i8.5 21 1.522 - - - - 0.714 0.808 - - -
25. CABZ01070637.1 CABZ01070637.1 1 1 - - - - - 1.000 - - -
26. EFEMP1_1 EFEMP1_1 8 1 - - - - - 1.000 - - -
27. si:dkey-219e20.3 si:dkey-219e20.3 1 1 - - - - - 1.000 - - -
28. GSTK1_2 GSTK1_2 8 1 - - - - - 1.000 - - -
29. csrp1b ENSDARG00000030980 2 1 - - - 1.000 - - - - - cysteine and glycine-rich protein 1b [Source:ZFIN;Acc:ZDB-GENE-070112-252]
30. dio2 ENSDARG00000094857 17 1 - - - 1.000 - - - - - iodothyronine deiodinase 2 [Source:ZFIN;Acc:ZDB-GENE-030327-4]
31. clcn2 clcn2 13 1 - - - - - 1.000 - - -
32. BX548011.3 ENSDARG00000113526 2 1 - - - 1.000 - - - - -
33. BPHL ENSDARG00000102877 28 1 - - - - - 1.000 - - - biphenyl hydrolase like [Source:ZFIN;Acc:ZDB-GENE-170623-2]
34. CT583626.2 CT583626.2 53 1 - - - - - 1.000 - - -
35. si:ch211-161n3.5 ENSDARG00000095981 1 1 - - - - - 1.000 - - - si:ch211-161n3.5 [Source:ZFIN;Acc:ZDB-GENE-110913-81]
36. PSMD2 ENSDARG00000099653 97 1 - - - - - 1.000 - - - proteasome 26S subunit, non-ATPase 2 [Source:HGNC Symbol;Acc:HGNC:9559]
37. gng8 ENSDARG00000042970 117 1 - - - - - 1.000 - - - guanine nucleotide binding protein (G protein), gamma 8 [Source:ZFIN;Acc:ZDB-GENE-050522-312]
38. TMEM55B TMEM55B 76 1 - - - - - 1.000 - - -
39. cpn1 ENSDARG00000005185, ENSDARG00000096728 255 1 - - - 1.000 - - - - - carboxypeptidase N, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9116]
40. nprl2 ENSDARG00000059613, ENSDARG00000112631 160 1 - - - 1.000 - - - - - NPR2 like, GATOR1 complex subunit [Source:ZFIN;Acc:ZDB-GENE-060825-93]
41. si:ch211-10j20.1 si:ch211-10j20.1 24 1 - - - - - 1.000 - - -
42. or115-1 ENSDARG00000018521 1 1 - - - 1.000 - - - - - odorant receptor, family F, subfamily 115, member 1 [Source:ZFIN;Acc:ZDB-GENE-010309-2]
43. CHD6 ENSDARG00000017244 219 1 - - - - - 1.000 - - - chromodomain helicase DNA binding protein 6 [Source:ZFIN;Acc:ZDB-GENE-130530-559]
44. tmem86a ENSDARG00000044034 1 1 - - - - - 1.000 - - - transmembrane protein 86A [Source:ZFIN;Acc:ZDB-GENE-050320-81]
45. SNORD88 SNORD88 232 1 - - - - - 1.000 - - -
46. arl11l arl11l 31 1 - - - 1.000 - - - - -
47. snx24 ENSDARG00000053527 31 1 - - - - - 1.000 - - - sorting nexin 24 [Source:ZFIN;Acc:ZDB-GENE-050913-45]
48. chrm2a ENSDARG00000098612 5 1 - - - 1.000 - - - - - cholinergic receptor, muscarinic 2a [Source:ZFIN;Acc:ZDB-GENE-030314-1]
49. usp46 ENSDARG00000045343 65 1 - - - - - 1.000 - - - ubiquitin specific peptidase 46 [Source:ZFIN;Acc:ZDB-GENE-070705-213]
50. fabp10a ENSDARG00000038439 4 1 - - - - - 1.000 - - - fatty acid binding protein 10a, liver basic [Source:ZFIN;Acc:ZDB-GENE-020318-1]
51. GRIK1 GRIK1 1 1 - - - 1.000 - - - - -
52. PLCG2 ENSDARG00000068763 11 1 - - - 1.000 - - - - - phospholipase C, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9532]
53. nfixa ENSDARG00000043226 14 1 - - - 1.000 - - - - - nuclear factor I/Xa [Source:ZFIN;Acc:ZDB-GENE-080722-15]
54. glis1b ENSDARG00000027933 14 1 - - - 1.000 - - - - - GLIS family zinc finger 1b [Source:ZFIN;Acc:ZDB-GENE-081105-172]
55. cdh23 ENSDARG00000007561, ENSDARG00000094454 3 1 - - - 1.000 - - - - - cadherin-related 23 [Source:ZFIN;Acc:ZDB-GENE-040513-7]
56. VASH1 ENSDARG00000092716 33 1 - - - - - 1.000 - - - vasohibin 1 [Source:HGNC Symbol;Acc:HGNC:19964]
57. U5 U5 0 1 - - - 1.000 - - - - -
58. CCDC180 ENSDARG00000032372 21 1 - - - - - 1.000 - - - coiled-coil domain containing 180 [Source:ZFIN;Acc:ZDB-GENE-130530-582]
59. TMBIM1 TMBIM1 2 1 - - - - - 1.000 - - -
60. CSGALNACT1_1 CSGALNACT1_1 4 1 - - - 1.000 - - - - -
61. CENPA 63 1 - - - - - 1.000 - - - histone H3-like centromeric protein A
62. zak_1 ENSDARG00000006978, ENSDARG00000044615 7 1 - - - - - 1.000 - - - sterile alpha motif and leucine zipper containing kinase AZK [Source:ZFIN;Acc:ZDB-GENE-070912-386]
63. ftr09 ENSDARG00000095345 0 1 - - - 1.000 - - - - - finTRIM family, member 9 [Source:ZFIN;Acc:ZDB-GENE-070912-223]
64. gltpb ENSDARG00000077962 5 1 - - - 1.000 - - - - - glycolipid transfer protein b [Source:ZFIN;Acc:ZDB-GENE-091118-80]
65. AL954173.3 AL954173.3 1 1 - - - 1.000 - - - - -
66. si:ch211-274k16.9 ENSDARG00000095918 1 1 - - - - - 1.000 - - - si:ch211-274k16.9 [Source:ZFIN;Acc:ZDB-GENE-110408-30]
67. CT583625.1 ENSDARG00000093788 10 1 - - - 1.000 - - - - -
68. si:ch211-64i20.4 si:ch211-64i20.4 3 1 - - - 1.000 - - - - -
69. ttc6 ENSDARG00000104125 7 1 - - - 1.000 - - - - - tetratricopeptide repeat domain 6 [Source:ZFIN;Acc:ZDB-GENE-090429-2]
70. ccbe1 ENSDARG00000086158 0 1 - - - 1.000 - - - - - collagen and calcium binding EGF domains 1 [Source:ZFIN;Acc:ZDB-GENE-090506-7]
71. si:dkey-183p4.10 ENSDARG00000077907 5 1 - - - 1.000 - - - - - si:dkey-183p4.10 [Source:ZFIN;Acc:ZDB-GENE-081104-337]
72. CR388132.1 ENSDARG00000097728 61 1 - - - - - 1.000 - - -
73. lonrf1 ENSDARG00000075048 13 1 - - - - - 1.000 - - - LON peptidase N-terminal domain and ring finger 1 [Source:ZFIN;Acc:ZDB-GENE-101021-4]
74. calhm3 ENSDARG00000079602 4 1 - - - 1.000 - - - - - calcium homeostasis modulator 3 [Source:ZFIN;Acc:ZDB-GENE-081107-70]
75. CU571310.1 ENSDARG00000102580 53 1 - - - - - 1.000 - - - ras-related protein Rab-39A-like [Source:NCBI gene;Acc:100330257]
76. hapln4 ENSDARG00000018542 10 1 - - - - - 1.000 - - - hyaluronan and proteoglycan link protein 4 [Source:ZFIN;Acc:ZDB-GENE-060503-243]
77. nfixb ENSDARG00000061836 7 1 - - - 1.000 - - - - - nuclear factor I/Xb [Source:ZFIN;Acc:ZDB-GENE-060421-5000]
78. si:ch211-119d14.3 ENSDARG00000075332 12 1 - - - - - 1.000 - - - si:ch211-119d14.3 [Source:ZFIN;Acc:ZDB-GENE-081104-100]
79. ascl1b ENSDARG00000009702, ENSDARG00000101628 1 1 - - - 1.000 - - - - - achaete-scute family bHLH transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-980526-174]
80. CR533575.1 CR533575.1 0 1 - - - - - 1.000 - - -
81. PRKD2_1 PRKD2_1 1 1 - - - - - 1.000 - - -
82. ampd2 ampd2 6 1 - - - 1.000 - - - - -
83. si:dkey-272j9.4 si:dkey-272j9.4 2 1 - - - - - 1.000 - - -
84. twsg1b 7 1 - - - 1.000 - - - - - twisted gastrulation BMP signaling modulator 1b
85. si:dkey-22h13.2 ENSDARG00000112725 3 1 - - - 1.000 - - - - - si:dkey-22h13.2 [Source:ZFIN;Acc:ZDB-GENE-120703-42]
86. ntrk3a ENSDARG00000077228 12 1 - - - 1.000 - - - - - neurotrophic tyrosine kinase, receptor, type 3a [Source:ZFIN;Acc:ZDB-GENE-010126-3]
87. MAMDC4 MAMDC4 3 1 - - - 1.000 - - - - -
88. KBTBD13 ENSDARG00000076449 10 1 - - - - - 1.000 - - - kelch repeat and BTB (POZ) domain containing 13 [Source:ZFIN;Acc:ZDB-GENE-140106-122]
89. dnajc17 ENSDARG00000104959 70 1 - - - - - 1.000 - - - DnaJ (Hsp40) homolog, subfamily C, member 17 [Source:ZFIN;Acc:ZDB-GENE-040426-894]
90. cnr1 ENSDARG00000009020 33 1 - - - - - 1.000 - - - cannabinoid receptor 1 [Source:ZFIN;Acc:ZDB-GENE-040312-3]
91. tmem44 ENSDARG00000068193 8 1 - - - - - 1.000 - - - transmembrane protein 44 [Source:ZFIN;Acc:ZDB-GENE-060825-65]
92. si:dkey-265e15.5 ENSDARG00000103229 6 1 - - - 1.000 - - - - - si:dkey-265e15.5 [Source:ZFIN;Acc:ZDB-GENE-081104-6]
93. tmem64 ENSDARG00000061723, ENSDARG00000113304 62 1 - - - - - 1.000 - - - transmembrane protein 64 [Source:ZFIN;Acc:ZDB-GENE-060503-182]
94. gpr19 ENSDARG00000102226 17 1 - - - 1.000 - - - - - G protein-coupled receptor 19 [Source:ZFIN;Acc:ZDB-GENE-040426-1295]
95. si:dkey-49n23.3 ENSDARG00000095325 4 1 - - - 1.000 - - - - - si:dkey-49n23.3 [Source:ZFIN;Acc:ZDB-GENE-050208-799]
96. zgc:158260_1 ENSDARG00000101703 0 1 - - - - - 1.000 - - - zgc:158260 [Source:ZFIN;Acc:ZDB-GENE-061201-24]
97. si:ch211-62a1.1 si:ch211-62a1.1 6 1 - - - - - 1.000 - - -
98. ppp1r3db ENSDARG00000076248 32 1 - - - - - 1.000 - - - protein phosphatase 1, regulatory subunit 3Db [Source:ZFIN;Acc:ZDB-GENE-110201-1]
99. EGFLAM 0 1 - - - - - 1.000 - - - EGF like, fibronectin type III and laminin G domains, transcript variant X2
100. pcdh2aa3 0 1 - - - - - 1.000 - - - protocadherin 2 alpha a 3

There are 568 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA