Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-6n3.3

Gene Name Gene ID Reads Annotation
si:dkey-6n3.3 si:dkey-6n3.3 9










Genes with expression patterns similar to si:dkey-6n3.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-6n3.3 si:dkey-6n3.3 9 7 - 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000
2. si:ch211-204c5.6 si:ch211-204c5.6 7 2 - 1.000 - - 1.000 - - - -
3. GMEB2 ENSDARG00000093240 6 2 - 1.000 - - 1.000 - - - - glucocorticoid modulatory element binding protein 2 [Source:HGNC Symbol;Acc:HGNC:4371]
4. si:dkeyp-27e10.6 si:dkeyp-27e10.6 36 2 - 1.000 - - - 1.000 - - -
5. si:ch211-13k12.1 si:ch211-13k12.1 25 2 - 1.000 - - - - - - 1.000
6. si:dkey-98f17.5 ENSDARG00000068863, ENSDARG00000116489 7 2 - - - - 1.000 - - - 1.000 si:dkey-98f17.5 [Source:ZFIN;Acc:ZDB-GENE-060526-354]
7. ttc6 ENSDARG00000104125 7 2 - 1.000 - - - - - - 1.000 tetratricopeptide repeat domain 6 [Source:ZFIN;Acc:ZDB-GENE-090429-2]
8. si:dkey-274m14.3 si:dkey-274m14.3 7 2 - - - - - 1.000 - - 1.000
9. RNF214_1 RNF214_1 5 1.982 - 1.000 - - 0.982 - - - -
10. si:ch211-207c6.4 si:ch211-207c6.4 7 1.938 - 1.000 - - - 0.938 - - -
11. CR318624.1 ENSDARG00000094618 5 1.909 - - - 0.909 - - - - 1.000
12. slc5a5 ENSDARG00000005392 6 1.909 - - - 0.909 - - - - 1.000 solute carrier family 5 (sodium/iodide cotransporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-060503-585]
13. CU855711.1 ENSDARG00000088643 6 1.892 - - - - - 1.000 0.892 - - legumain-like [Source:NCBI gene;Acc:108191752]
14. si:ch211-234c11.3_1 ENSDARG00000093615 10 1.892 - - - - - - 0.892 - 1.000 si:ch211-234c11.3 [Source:ZFIN;Acc:ZDB-GENE-110914-93]
15. tbx5b ENSDARG00000092060 37 1.892 - 1.000 - - - - 0.892 - - T-box 5b [Source:ZFIN;Acc:ZDB-GENE-060601-2]
16. CR387932.1 ENSDARG00000097344 2 1.892 - 1.000 - - - - 0.892 - -
17. cyp2n13 ENSDARG00000042953 10 1.892 - - - - - - 0.892 - 1.000 cytochrome P450, family 2, subfamily N, polypeptide 13 [Source:ZFIN;Acc:ZDB-GENE-041001-158]
18. si:dkey-150h13.1 si:dkey-150h13.1 1 1.892 - - - - - - 0.892 - 1.000
19. CYP27A1_2 CYP27A1_2 5 1.892 - - - - - - 0.892 - 1.000
20. BX537305.1 ENSDARG00000113834 10 1.892 - 1.000 - - - - 0.892 - -
21. def6b ENSDARG00000044524 99 1.88 - 1.000 - 0.880 - - - - - differentially expressed in FDCP 6b homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-110408-59]
22. ddx26b 79 1.856 - 1.000 - - - 0.856 - - - DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B, transcript variant X1
23. si:dkeyp-46h3.3 ENSDARG00000092887 11 1.854 - 1.000 - - - 0.854 - - - si:dkeyp-46h3.3 [Source:ZFIN;Acc:ZDB-GENE-060503-748]
24. CABZ01041769.1 CABZ01041769.1 17 1.854 - 1.000 - - - 0.854 - - -
25. slc15a1b ENSDARG00000044528 6 1.832 - - - - - - 0.832 - 1.000 solute carrier family 15 (oligopeptide transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4661]
26. si:ch73-141f17.1 si:ch73-141f17.1 1 1.828 - 1.000 - - - - - 0.828 -
27. si:dkey-199k11.5 si:dkey-199k11.5 4 1.828 - - - - - - - 0.828 1.000
28. si:ch211-122l24.4 si:ch211-122l24.4 41 1.82 - 1.000 - - - 0.820 - - -
29. CABZ01081747.2 CABZ01081747.2 9 1.815 - - - - - - 0.815 - 1.000
30. CR391967.1 CR391967.1 135 1.807 - 1.000 - - - - - - 0.807
31. BX901974.1 ENSDARG00000067592 2 1.801 - - - 0.909 - - 0.892 - -
32. si:ch211-215m21.17 si:ch211-215m21.17 14 1.791 - 1.000 - - 0.791 - - - -
33. IYD IYD 8 1.785 - - - - - 0.893 0.892 - -
34. si:dkey-176f19.7 ENSDARG00000103348 10 1.777 - - - - - 0.777 - - 1.000 si:dkey-176f19.7 [Source:ZFIN;Acc:ZDB-GENE-110913-130]
35. CABZ01075242.1 ENSDARG00000114227 9 1.768 - 1.000 - - - 0.768 - - -
36. si:dkey-122c11.4 si:dkey-122c11.4 13 1.761 - 1.000 - - - - - - 0.761
37. crygm2d1 ENSDARG00000087324 258 1.738 - - - 0.738 - 1.000 - - - crystallin, gamma M2d1 [Source:ZFIN;Acc:ZDB-GENE-050522-395]
38. MEI1 MEI1 2 1.728 - - - - 0.728 - - - 1.000
39. gja3 ENSDARG00000021889, ENSDARG00000116798 49 1.715 - - - - - 1.000 - - 0.715 gap junction protein, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-031217-3]
40. ZDHHC12 ZDHHC12 29 1.712 - - - 0.882 0.830 - - - -
41. CU928217.1 CU928217.1 12 1.712 - 1.000 - - - 0.712 - - -
42. b3gat3 ENSDARG00000001939 58 1.708 - 0.816 - - - - 0.892 - - beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I) [Source:ZFIN;Acc:ZDB-GENE-020419-3]
43. grk7b ENSDARG00000055534 17 1.707 - - - - - 0.815 0.892 - - G protein-coupled receptor kinase 7b [Source:ZFIN;Acc:ZDB-GENE-030904-3]
44. irf1b ENSDARG00000043249 30 1.682 - 0.960 - - - - 0.722 - - interferon regulatory factor 1b [Source:ZFIN;Acc:ZDB-GENE-041114-13]
45. pax6l pax6l 54 1.661 - - - 0.804 - - - - 0.857
46. cldn15a ENSDARG00000112049 264 1.658 - 0.773 - - - - 0.885 - - claudin 15a [Source:ZFIN;Acc:ZDB-GENE-040426-1305]
47. mlycd ENSDARG00000104732, ENSDARG00000117073 5 1.65 - - - - - - 0.909 0.741 - malonyl-CoA decarboxylase [Source:ZFIN;Acc:ZDB-GENE-070410-120]
48. insb ENSDARG00000034610, ENSDARG00000112105 60 1.63 - - - - - 0.823 0.807 - - preproinsulin b [Source:ZFIN;Acc:ZDB-GENE-040113-2]
49. pkhd1l1 ENSDARG00000091116 23 1.629 - - - - 0.737 - 0.892 - - polycystic kidney and hepatic disease 1 (autosomal recessive)-like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-475]
50. polr1b ENSDARG00000077469, ENSDARG00000115880 313 1.614 - - - - - 0.821 0.793 - - RNA polymerase I subunit B [Source:ZFIN;Acc:ZDB-GENE-040426-1598]
51. ZC3H12A ENSDARG00000005271 5 1.611 - - - - - 0.719 0.892 - - zinc finger CCCH-type containing 12A [Source:ZFIN;Acc:ZDB-GENE-110411-6]
52. SNORA38 SNORA38 574 1.61 - 0.861 - - - 0.749 - - -
53. slc6a2 ENSDARG00000016141 49 1.604 - - - 0.712 - - 0.892 - - solute carrier family 6 (neurotransmitter transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-110408-4]
54. CU207245.1 ENSDARG00000102559 15 1.54 - - - 0.713 - - - 0.827 -
55. asb16 ENSDARG00000056468, ENSDARG00000110292 126 1.532 - 0.710 - - 0.822 - - - - ankyrin repeat and SOCS box containing 16 [Source:ZFIN;Acc:ZDB-GENE-031031-3]
56. leng1 ENSDARG00000037633 351 1.496 - 0.777 - - - - 0.719 - - leukocyte receptor cluster (LRC) member 1 [Source:ZFIN;Acc:ZDB-GENE-040912-159]
57. FP085391.2 FP085391.2 85 1.481 - - - - - 0.727 0.754 - -
58. alkbh1 ENSDARG00000071164 140 1.457 - - - - - 0.734 0.723 - - alkB homolog 1, histone H2A dioxygenase [Source:ZFIN;Acc:ZDB-GENE-050522-196]
59. ddhd2 ENSDARG00000076765 29 1.447 - - - - 0.721 0.726 - - - DDHD domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-080519-4]
60. lingo1b ENSDARG00000035899 86 1 - 1.000 - - - - - - - leucine rich repeat and Ig domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-040912-136]
61. si:ch211-286b5.9 ENSDARG00000086166 27 1 - 1.000 - - - - - - - si:ch211-286b5.9 [Source:ZFIN;Acc:ZDB-GENE-121214-63]
62. si:dkeyp-51f11.3 si:dkeyp-51f11.3 0 1 - - - - - - - - 1.000
63. fxyd6 ENSDARG00000100971 51 1 - - - - - 1.000 - - - FXYD domain containing ion transport regulator 6 [Source:ZFIN;Acc:ZDB-GENE-030131-5919]
64. BX548000.1 ENSDARG00000099044 45 1 - 1.000 - - - - - - -
65. PDE6H 3 1 - - - - - - - - 1.000 phosphodiesterase 6H, cGMP-specific, cone, gamma, transcript variant 2
66. slc47a2 2 1 - - - - - - - - 1.000 solute carrier family 47 (multidrug and toxin extrusion), member 2
67. CDR2_1 CDR2_1 8 1 - - - - - - - - 1.000
68. ptf1a ENSDARG00000014479 349 1 - 1.000 - - - - - - - pancreas associated transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030616-579]
69. mir29b-1 0 1 - 1.000 - - - - - - - microRNA 29b-1
70. fbxw9 ENSDARG00000058020 28 1 - - - - - 1.000 - - - F-box and WD repeat domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-091204-198]
71. CDK18 ENSDARG00000012204 5 1 - - - - - - - - 1.000 cyclin dependent kinase 18 [Source:HGNC Symbol;Acc:HGNC:8751]
72. cdh10 cdh10 38 1 - 1.000 - - - - - - -
73. zgc:165604 ENSDARG00000021241, ENSDARG00000116203 15 1 - 1.000 - - - - - - - zgc:165604 [Source:ZFIN;Acc:ZDB-GENE-070615-34]
74. SRCIN1 SRCIN1 5 1 - 1.000 - - - - - - -
75. si:dkey-97l20.5 si:dkey-97l20.5 33 1 - 1.000 - - - - - - -
76. si:dkey-42i9.8 ENSDARG00000071541 17 1 - 1.000 - - - - - - - si:dkey-42i9.8 [Source:ZFIN;Acc:ZDB-GENE-050208-412]
77. si:dkey-34f9.2 si:dkey-34f9.2 0 1 - - - - - - - - 1.000
78. si:ch211-218c6.9 si:ch211-218c6.9 40 1 - 1.000 - - - - - - -
79. si:ch211-113a14.15_1 2 1 - 1.000 - - - - - - - si:ch211-113a14.15
80. CDH8 172 1 - 1.000 - - - - - - - cadherin 8
81. BX324215.2 BX324215.2 2 1 - - - - - 1.000 - - -
82. CT583679.2 CT583679.2 10 1 - 1.000 - - - - - - -
83. CR356223.1 ENSDARG00000093865 1 1 - - - - - - - - 1.000
84. BX119910.4 BX119910.4 0 1 - - - - - - - - 1.000
85. si:ch211-198e13.3 5 1 - - - - - - - - 1.000 si:ch211-198e13.3, transcript variant X1
86. polr2b ENSDARG00000098783 90 1 - - - - - 1.000 - - - polymerase (RNA) II (DNA directed) polypeptide B [Source:ZFIN;Acc:ZDB-GENE-041008-1]
87. rims3 ENSDARG00000062305 202 1 - 1.000 - - - - - - - regulating synaptic membrane exocytosis 3 [Source:ZFIN;Acc:ZDB-GENE-060503-788]
88. zgc:92161 ENSDARG00000101749 27 1 - - - - - - - - 1.000 zgc:92161 [Source:ZFIN;Acc:ZDB-GENE-040912-22]
89. si:ch211-113a14.19_1 ENSDARG00000109926, ENSDARG00000111536, ENSDARG00000113481, ENSDARG00000113707, ENSDARG00000115875 15 1 - - - - - - - - 1.000 si:ch211-113a14.19 [Source:ZFIN;Acc:ZDB-GENE-121214-198]
90. si:dkey-82i20.3 si:dkey-82i20.3 6 1 - - - - - - - - 1.000
91. hhat ENSDARG00000074428 8 1 - - - - - - - - 1.000 hedgehog acyltransferase [Source:ZFIN;Acc:ZDB-GENE-051118-1]
92. CU570987.1 CU570987.1 7 1 - 1.000 - - - - - - -
93. foxq1a ENSDARG00000030896 121 1 - 1.000 - - - - - - - forkhead box Q1a [Source:ZFIN;Acc:ZDB-GENE-070424-74]
94. rbfox3l rbfox3l 34 1 - 1.000 - - - - - - -
95. si:dkey-19f21.8 si:dkey-19f21.8 12 1 - 1.000 - - - - - - -
96. si:ch211-244h4.1 si:ch211-244h4.1 1 1 - - - - - 1.000 - - -
97. CU179703.1 CU179703.1 5 1 - 1.000 - - - - - - -
98. CABZ01084273.1 CABZ01084273.1 16 1 - 1.000 - - - - - - -
99. si:dkey-179k24.6 si:dkey-179k24.6 5 1 - - - - - - - - 1.000
100. camk1db ENSDARG00000017446 47 1 - 1.000 - - - - - - - calcium/calmodulin-dependent protein kinase 1Db [Source:ZFIN;Acc:ZDB-GENE-070112-1872]

There are 1441 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA