Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-67c22.2

Gene Name Gene ID Reads Annotation
si:dkey-67c22.2 ENSDARG00000055389 6410 si:dkey-67c22.2 [Source:ZFIN;Acc:ZDB-GENE-030131-5845]










Genes with expression patterns similar to si:dkey-67c22.2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-67c22.2 ENSDARG00000055389 6410 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:dkey-67c22.2 [Source:ZFIN;Acc:ZDB-GENE-030131-5845]
2. smarca4 smarca4 9726 3.807 0.720 - - 0.717 0.706 - 0.724 - 0.940
3. ylpm1 ENSDARG00000043680 7676 2.53 - - - 0.707 - - 0.844 - 0.979 YLP motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2196]
4. eppk1 ENSDARG00000096359 4315 2.488 - 0.849 0.704 - - - - - 0.935 epiplakin 1 [Source:ZFIN;Acc:ZDB-GENE-030416-1]
5. tardbpl ENSDARG00000004452, ENSDARG00000116205 12160 2.446 - - - - - 0.701 0.759 - 0.986 TAR DNA binding protein, like [Source:ZFIN;Acc:ZDB-GENE-031030-1]
6. hirip3 ENSDARG00000027749, ENSDARG00000115688 5875 2.437 - - - - - 0.744 0.713 - 0.980 HIRA interacting protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-5753]
7. llgl1 ENSDARG00000009693 4205 2.359 - 0.869 - - 0.730 - 0.760 - - lethal giant larvae homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-060825-69]
8. Mar-05 Mar-05 2391 2.286 - - - - - 0.816 0.701 0.769 -
9. snrpf ENSDARG00000105037 10241 2.285 - - - 0.736 - 0.755 0.794 - - small nuclear ribonucleoprotein polypeptide F [Source:ZFIN;Acc:ZDB-GENE-040930-9]
10. si:ch211-51e12.7 ENSDARG00000045914 9598 2.267 0.710 - - 0.751 - 0.806 - - - si:ch211-51e12.7 [Source:ZFIN;Acc:ZDB-GENE-030131-8279]
11. znf865 ENSDARG00000036698 15532 2.258 - - - 0.714 - 0.710 0.834 - - zinc finger protein 865 [Source:ZFIN;Acc:ZDB-GENE-060503-896]
12. prp19 prp19 4804 2.241 - - - 0.738 0.733 0.770 - - -
13. myef2 ENSDARG00000059398 6050 2.221 - - - 0.719 - 0.743 0.759 - - myelin expression factor 2 [Source:ZFIN;Acc:ZDB-GENE-051120-114]
14. plk1 ENSDARG00000058471, ENSDARG00000111745 7020 2.21 - - - - 0.721 0.722 0.767 - - polo-like kinase 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-021115-7]
15. fam105bb fam105bb 1253 1.842 - 0.850 - - - - - - 0.992
16. efnb3b ENSDARG00000042277 5823 1.84 - - - - - - 0.844 - 0.996 ephrin-B3b [Source:ZFIN;Acc:ZDB-GENE-010618-3]
17. meaf6 ENSDARG00000101216 6865 1.801 - - - - - - 0.805 - 0.996 MYST/Esa1-associated factor 6 [Source:ZFIN;Acc:ZDB-GENE-040808-12]
18. adnp2b ENSDARG00000028431 4683 1.788 - - - - - - 0.809 - 0.979 ADNP homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5930]
19. snapin ENSDARG00000062382 1531 1.769 - - - - - - 0.774 - 0.995 SNAP-associated protein [Source:ZFIN;Acc:ZDB-GENE-060503-343]
20. cdc25 cdc25 3913 1.764 - - - - 0.767 - - - 0.997
21. idh3g ENSDARG00000023648 4877 1.757 - 0.771 - - - - - - 0.986 isocitrate dehydrogenase 3 (NAD+) gamma [Source:ZFIN;Acc:ZDB-GENE-050417-435]
22. pigk ENSDARG00000024479 1386 1.724 - - - - - - 0.729 - 0.995 phosphatidylinositol glycan anchor biosynthesis, class K [Source:ZFIN;Acc:ZDB-GENE-040625-162]
23. rpa3 ENSDARG00000002613 2923 1.721 - 0.937 - - - - 0.784 - - replication protein A3 [Source:ZFIN;Acc:ZDB-GENE-040426-977]
24. fam50a ENSDARG00000024895 3020 1.72 - - - - - - 0.724 - 0.996 family with sequence similarity 50, member A [Source:ZFIN;Acc:ZDB-GENE-050417-110]
25. si:ch211-262h13.3 ENSDARG00000070898 2094 1.707 - - - - - 0.711 - - 0.996 si:ch211-262h13.3 [Source:ZFIN;Acc:ZDB-GENE-050208-532]
26. ankrd28b ENSDARG00000009023 960 1.671 - 0.891 - - - - 0.780 - - ankyrin repeat domain 28b [Source:ZFIN;Acc:ZDB-GENE-070622-4]
27. LIG1 ENSDARG00000060041, ENSDARG00000110159, ENSDARG00000113788 8110 1.659 - - - 0.848 - - 0.811 - - ligase I, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-110404-2]
28. tspan2 tspan2 948 1.658 - 0.895 - - - - 0.763 - -
29. rbm15b ENSDARG00000078966, ENSDARG00000112832 1888 1.654 - 0.899 - - - - 0.755 - - RNA binding motif protein 15B [Source:ZFIN;Acc:ZDB-GENE-080204-91]
30. mcm7 ENSDARG00000101180 12417 1.652 - - - 0.737 - - 0.915 - - minichromosome maintenance complex component 7 [Source:ZFIN;Acc:ZDB-GENE-020419-27]
31. tmem35 ENSDARG00000052567 5685 1.651 - - 0.936 0.715 - - - - - transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
32. si:ch211-71n6.4 ENSDARG00000102234 2499 1.646 - 0.866 - - - 0.780 - - - si:ch211-71n6.4 [Source:ZFIN;Acc:ZDB-GENE-091204-213]
33. usp12a ENSDARG00000078109 490 1.639 - 0.903 - - - 0.736 - - - ubiquitin specific peptidase 12a [Source:ZFIN;Acc:ZDB-GENE-060228-3]
34. gga3 ENSDARG00000103667 675 1.634 - 0.883 - - - 0.751 - - - ggolgi-associated, gamma adaptin ear containing, ARF binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-041111-218]
35. zswim5 ENSDARG00000055900 4243 1.631 - 0.799 - - - 0.832 - - - zinc finger, SWIM-type containing 5 [Source:ZFIN;Acc:ZDB-GENE-030925-30]
36. hnrnpa1 hnrnpa1 1302 1.631 - 0.875 - - - - 0.756 - -
37. unga ENSDARG00000042527 1169 1.629 - - - 0.718 - - 0.911 - - uracil DNA glycosylase a [Source:ZFIN;Acc:ZDB-GENE-040426-900]
38. rnf2 ENSDARG00000010381 3427 1.627 - - - - - 0.795 0.832 - - ring finger protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5243]
39. hug 4100 1.625 - - - - - 0.818 0.807 - - HuG, transcript variant X2
40. dr1 ENSDARG00000105098, ENSDARG00000113528 5263 1.624 - 0.869 - - - - 0.755 - - down-regulator of transcription 1 [Source:ZFIN;Acc:ZDB-GENE-061013-797]
41. map7d1b ENSDARG00000104701 1655 1.623 - 0.919 - - - 0.704 - - - MAP7 domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-080215-23]
42. taf3 ENSDARG00000045513 1819 1.619 - - - - - 0.798 0.821 - - TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated facto [Source:ZFIN;Acc:ZDB-GENE-030131-6406]
43. acbd3 ENSDARG00000042623 2643 1.616 - 0.853 - - - 0.763 - - - acyl-Coenzyme A binding domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1930]
44. cdk6 ENSDARG00000070228 1778 1.61 - - - - - 0.861 0.749 - - cyclin-dependent kinase 6 [Source:ZFIN;Acc:ZDB-GENE-060503-786]
45. polr2a ENSDARG00000099966 5706 1.61 - - - - 0.719 0.891 - - - polymerase (RNA) II (DNA directed) polypeptide A [Source:ZFIN;Acc:ZDB-GENE-041008-78]
46. ZC3H4 ENSDARG00000078355 1888 1.607 - - - - - 0.900 0.707 - - zinc finger CCCH-type containing 4 [Source:ZFIN;Acc:ZDB-GENE-100330-1]
47. si:dkey-240e12.6 ENSDARG00000110137 674 1.605 - 0.883 0.722 - - - - - - si:dkey-240e12.6 [Source:ZFIN;Acc:ZDB-GENE-050208-367]
48. smarce1 ENSDARG00000016871 9628 1.604 - - - - - 0.785 0.819 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-967]
49. cdc42ep4a ENSDARG00000101457, ENSDARG00000114480 1226 1.602 - 0.893 - - - - - 0.709 - CDC42 effector protein (Rho GTPase binding) 4a [Source:ZFIN;Acc:ZDB-GENE-040704-22]
50. SERBP1 SERBP1 9276 1.601 - - - - - 0.841 0.760 - -
51. pcnx 689 1.601 - 0.865 - - - - 0.736 - - pecanex homolog (Drosophila), transcript variant X5
52. kif5ba ENSDARG00000074131, ENSDARG00000103394 5232 1.599 - 0.822 0.777 - - - - - - kinesin family member 5B, a [Source:ZFIN;Acc:ZDB-GENE-070629-2]
53. yaf2 ENSDARG00000015966 1905 1.596 - 0.852 - - - 0.744 - - - YY1 associated factor 2 [Source:ZFIN;Acc:ZDB-GENE-041210-115]
54. sas sas 1783 1.592 - 0.890 - - - 0.702 - - -
55. srsf2b ENSDARG00000103893 1437 1.591 - 0.800 - - - 0.791 - - - serine/arginine-rich splicing factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-2420]
56. dctd ENSDARG00000036990 2168 1.573 - 0.817 - - - - 0.756 - - dCMP deaminase [Source:ZFIN;Acc:ZDB-GENE-050417-116]
57. AIFM2 ENSDARG00000077549 1419 1.571 - 0.851 - - - 0.720 - - - apoptosis-inducing factor, mitochondrion-associated, 2 [Source:ZFIN;Acc:ZDB-GENE-050506-76]
58. arglu1a ENSDARG00000019223 8716 1.569 - - - - - 0.775 0.794 - - arginine and glutamate rich 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2914]
59. hnrnpub ENSDARG00000004735 16496 1.568 - - - 0.804 - - 0.764 - - heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
60. tbcb ENSDARG00000068404, ENSDARG00000109716 5098 1.566 - - - - - 0.711 0.855 - - tubulin folding cofactor B [Source:ZFIN;Acc:ZDB-GENE-030131-9296]
61. pspc1 ENSDARG00000006621 966 1.559 - 0.713 - - - - 0.846 - - paraspeckle component 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9530]
62. mllt10 ENSDARG00000045401 7557 1.558 - - - - - 0.813 0.745 - - MLLT10, histone lysine methyltransferase DOT1L cofactor [Source:ZFIN;Acc:ZDB-GENE-041114-176]
63. rnls ENSDARG00000012453 338 1.558 - 0.836 - - - - 0.722 - - renalase, FAD-dependent amine oxidase [Source:ZFIN;Acc:ZDB-GENE-040718-351]
64. foxn4 ENSDARG00000010591 2332 1.557 - 0.850 - 0.707 - - - - - forkhead box N4 [Source:ZFIN;Acc:ZDB-GENE-990415-277]
65. rimkla ENSDARG00000016830, ENSDARG00000112193 4111 1.556 - - - - - 0.735 0.821 - - ribosomal modification protein rimK-like family member A [Source:ZFIN;Acc:ZDB-GENE-040912-20]
66. sfpq ENSDARG00000011564, ENSDARG00000115611 15626 1.555 - - - 0.784 - - 0.771 - - splicing factor proline/glutamine-rich [Source:ZFIN;Acc:ZDB-GENE-040426-2452]
67. uhrf1 ENSDARG00000103409 3282 1.555 - 0.759 - - - 0.796 - - - ubiquitin-like with PHD and ring finger domains 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2039]
68. PLEKHH3 ENSDARG00000070174 2117 1.553 - - 0.722 - - 0.831 - - - pleckstrin homology, MyTH4 and FERM domain containing H3 [Source:HGNC Symbol;Acc:HGNC:26105]
69. GIT1 ENSDARG00000039489 1157 1.553 - - - - - 0.794 - 0.759 - G protein-coupled receptor kinase interacting ArfGAP 1 [Source:ZFIN;Acc:ZDB-GENE-100408-5]
70. sh3bgrl3 ENSDARG00000098075 3071 1.55 - 0.775 - - - 0.775 - - - SH3 domain binding glutamate-rich protein like 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1059]
71. smc1al ENSDARG00000058203 8838 1.549 - - - - - 0.807 0.742 - - structural maintenance of chromosomes 1A, like [Source:ZFIN;Acc:ZDB-GENE-040426-57]
72. hnrnpl2 ENSDARG00000059303, ENSDARG00000114431 6633 1.549 - - - - - 0.777 0.772 - - heterogeneous nuclear ribonucleoprotein L2 [Source:ZFIN;Acc:ZDB-GENE-040426-2707]
73. kdm6bb ENSDARG00000056929 4807 1.547 - - - - - 0.792 0.755 - - lysine (K)-specific demethylase 6B, b [Source:ZFIN;Acc:ZDB-GENE-040724-166]
74. rnps1 ENSDARG00000116743 9994 1.546 - - - - 0.715 - 0.831 - - RNA binding protein S1, serine-rich domain [Source:NCBI gene;Acc:327020]
75. cltcb ENSDARG00000090716 5544 1.546 - - - - - 0.713 0.833 - - clathrin, heavy chain b (Hc) [Source:ZFIN;Acc:ZDB-GENE-050227-12]
76. pdzd11 ENSDARG00000053194, ENSDARG00000116591 1858 1.546 0.722 - - - - - 0.824 - - PDZ domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-040426-2544]
77. tmem165 ENSDARG00000034600 1174 1.545 - 0.842 - - - 0.703 - - - transmembrane protein 165 [Source:ZFIN;Acc:ZDB-GENE-030131-3222]
78. spred2a ENSDARG00000052435 1624 1.543 - 0.764 - - - 0.779 - - - sprouty-related, EVH1 domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-110830-2]
79. psmd11b ENSDARG00000005134 4242 1.541 - 0.831 - - - - 0.710 - - proteasome 26S subunit, non-ATPase 11b [Source:ZFIN;Acc:ZDB-GENE-030131-984]
80. BX539313.1 ENSDARG00000097396 1277 1.539 - 0.779 - - - - 0.760 - -
81. syncripl ENSDARG00000026723 3889 1.539 - 0.825 - - - - 0.714 - - synaptotagmin binding, cytoplasmic RNA interacting protein, like [Source:ZFIN;Acc:ZDB-GENE-030131-3104]
82. sulf2l sulf2l 4980 1.532 - - - - 0.714 - 0.818 - -
83. mta2 ENSDARG00000013031 2932 1.525 - - - 0.781 - - 0.744 - - metastasis associated 1 family, member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4803]
84. api5 ENSDARG00000033597 6655 1.524 0.791 - - - - 0.733 - - - apoptosis inhibitor 5 [Source:ZFIN;Acc:ZDB-GENE-030131-395]
85. polr2l ENSDARG00000058349, ENSDARG00000113402 3300 1.518 - - - - - 0.727 - 0.791 - polymerase (RNA) II (DNA directed) polypeptide L [Source:ZFIN;Acc:ZDB-GENE-050522-181]
86. ccdc85ca ENSDARG00000005232 3218 1.517 - 0.770 - - - 0.747 - - - coiled-coil domain containing 85C, a [Source:ZFIN;Acc:ZDB-GENE-060825-198]
87. rybpa ENSDARG00000037773 904 1.514 - - - - - - 0.813 0.701 - RING1 and YY1 binding protein a [Source:ZFIN;Acc:ZDB-GENE-030424-3]
88. rbms3 ENSDARG00000044574 2514 1.513 - - - - - 0.787 0.726 - - RNA binding motif, single stranded interacting protein [Source:ZFIN;Acc:ZDB-GENE-060929-244]
89. prcc ENSDARG00000063252 2065 1.512 - 0.725 - - - - 0.787 - - proline rich mitotic checkpoint control factor [Source:ZFIN;Acc:ZDB-GENE-070717-1]
90. clta ENSDARG00000045618, ENSDARG00000115484 11767 1.509 - - - - - 0.710 0.799 - - clathrin, light chain A [Source:ZFIN;Acc:ZDB-GENE-040426-1986]
91. COX20 ENSDARG00000099997 1451 1.507 - 0.774 - - - - 0.733 - - cytochrome c oxidase assembly factor COX20 [Source:ZFIN;Acc:ZDB-GENE-040718-467]
92. ncaph ENSDARG00000061468, ENSDARG00000113773 1401 1.504 - - - 0.753 - - 0.751 - - non-SMC condensin I complex, subunit H [Source:ZFIN;Acc:ZDB-GENE-070112-652]
93. ddx19 ENSDARG00000005699 4602 1.503 - - - - - 0.755 0.748 - - DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 19 (DBP5 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-020419-30]
94. yth2 yth2 3716 1.503 - - 0.729 - 0.774 - - - -
95. top1l ENSDARG00000070545 40529 1.501 - - - 0.795 - - 0.706 - - DNA topoisomerase I, like [Source:ZFIN;Acc:ZDB-GENE-060616-217]
96. cbx1b ENSDARG00000054442 1206 1.5 - - - - - 0.770 0.730 - - chromobox homolog 1b (HP1 beta homolog Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040625-68]
97. peli1b ENSDARG00000044083, ENSDARG00000112797 3801 1.5 0.767 - - - - - 0.733 - - pellino E3 ubiquitin protein ligase 1b [Source:ZFIN;Acc:ZDB-GENE-061027-372]
98. tmpoa ENSDARG00000007315 3638 1.5 - - - - - 0.754 0.746 - - thymopoietin a [Source:ZFIN;Acc:ZDB-GENE-030131-6003]
99. magi1b ENSDARG00000003169 2056 1.5 - - - - - 0.734 0.766 - - membrane associated guanylate kinase, WW and PDZ domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5110]
100. ctbp2 ctbp2 3255 1.499 - - - - - 0.741 0.758 - -

There are 1440 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA