Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-5i3.5

Gene Name Gene ID Reads Annotation
si:dkey-5i3.5 ENSDARG00000058345, ENSDARG00000110584 60 si:dkey-5i3.5 [Source:ZFIN;Acc:ZDB-GENE-070424-162]










Genes with expression patterns similar to si:dkey-5i3.5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-5i3.5 ENSDARG00000058345, ENSDARG00000110584 60 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:dkey-5i3.5 [Source:ZFIN;Acc:ZDB-GENE-070424-162]
2. BX571811.1 ENSDARG00000105621 25 1.883 0.883 - - - - 1.000 - - -
3. agmat ENSDARG00000059700 9 1.883 0.883 - - - - 1.000 - - - agmatine ureohydrolase (agmatinase) [Source:ZFIN;Acc:ZDB-GENE-060929-696]
4. ATP9A ENSDARG00000115869 9 1.803 0.853 - - - - 0.950 - - - ATPase phospholipid transporting 9A (putative) [Source:HGNC Symbol;Acc:HGNC:13540]
5. ASAP1 ASAP1 47 1.762 0.815 - - - 0.947 - - - -
6. zgc:158254 ENSDARG00000071233 265 1.762 - - - - 0.898 - 0.864 - - zgc:158254 [Source:ZFIN;Acc:ZDB-GENE-070112-2222]
7. pglyrp2 ENSDARG00000062998 11 1.692 - - - - 0.960 0.732 - - - peptidoglycan recognition protein 2 [Source:ZFIN;Acc:ZDB-GENE-071227-1]
8. med18 ENSDARG00000041237 247 1.636 0.727 - - - 0.909 - - - - mediator of RNA polymerase II transcription, subunit 18 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1276]
9. khdrbs2 ENSDARG00000069469 160 1.633 0.826 - - - 0.807 - - - - KH domain containing, RNA binding, signal transduction associated 2 [Source:ZFIN;Acc:ZDB-GENE-061013-497]
10. ppm1nb ENSDARG00000057032 77 1.625 - - - - 0.923 - 0.702 - - protein phosphatase, Mg2+/Mn2+ dependent, 1Nb (putative) [Source:ZFIN;Acc:ZDB-GENE-071004-34]
11. smtna ENSDARG00000074652 6 1.547 0.815 - - - - 0.732 - - - smoothelin a [Source:ZFIN;Acc:ZDB-GENE-091204-245]
12. zgc:193790 ENSDARG00000102033 167 1.532 0.705 0.827 - - - - - - - zgc:193790 [Source:ZFIN;Acc:ZDB-GENE-080723-55]
13. nfe2 ENSDARG00000020606 224 1.509 - - - - 0.735 - 0.774 - - nuclear factor, erythroid 2 [Source:ZFIN;Acc:ZDB-GENE-030124-1]
14. FBXO38 ENSDARG00000006924 307 1.489 - 0.770 - - 0.719 - - - - F-box protein 38 [Source:ZFIN;Acc:ZDB-GENE-030131-2797]
15. abcc9 ENSDARG00000015985 20 1.483 0.781 - - - - - 0.702 - - ATP-binding cassette, sub-family C (CFTR/MRP), member 9 [Source:ZFIN;Acc:ZDB-GENE-050517-23]
16. CDK5R1 CDK5R1 562 1.451 - 0.739 - - 0.712 - - - -
17. map7d1a ENSDARG00000098802 118 1.433 - - - - 0.731 - 0.702 - - MAP7 domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-060503-22]
18. si:dkey-4c15.18 si:dkey-4c15.18 54 1 - - - - - 1.000 - - -
19. CABZ01087562.1 CABZ01087562.1 80 1 - - - - - 1.000 - - -
20. dnm2a ENSDARG00000069937 32 1 - - - - - 1.000 - - - dynamin 2a [Source:ZFIN;Acc:ZDB-GENE-050913-84]
21. mphosph6 ENSDARG00000093007 340 1 - - - - - 1.000 - - - M-phase phosphoprotein 6 [Source:ZFIN;Acc:ZDB-GENE-040801-137]
22. bcl11ba ENSDARG00000062510 169 1 - - - - - 1.000 - - - B cell CLL/lymphoma 11Ba [Source:ZFIN;Acc:ZDB-GENE-061207-62]
23. wnt2ba ENSDARG00000005050 11 1 - - - - - - 1.000 - - wingless-type MMTV integration site family, member 2Ba [Source:ZFIN;Acc:ZDB-GENE-030717-2]
24. abcc6a ENSDARG00000016750 10 1 - - - - - - 1.000 - - ATP-binding cassette, sub-family C (CFTR/MRP), member 6a [Source:ZFIN;Acc:ZDB-GENE-050517-18]
25. SNORA53 SNORA53 10 0.964 0.964 - - - - - - - -
26. akt3a_1 ENSDARG00000104810 12 0.964 0.964 - - - - - - - - v-akt murine thymoma viral oncogene homolog 3a [Source:ZFIN;Acc:ZDB-GENE-050419-180]
27. sema3e ENSDARG00000036571, ENSDARG00000116446 115 0.962 - - - - 0.962 - - - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E [Source:ZFIN;Acc:ZDB-GENE-030131-7864]
28. ogfrl1 ENSDARG00000061223 64 0.96 - - - - 0.960 - - - - opioid growth factor receptor-like 1 [Source:ZFIN;Acc:ZDB-GENE-061207-32]
29. KCNJ12 KCNJ12 17 0.96 - - - - 0.960 - - - -
30. CABZ01117977.1 CABZ01117977.1 9 0.96 - - - - 0.960 - - - -
31. GRAMD2_1 GRAMD2_1 12 0.96 - - - - 0.960 - - - -
32. CU184872.1 CU184872.1 15 0.96 - - - - 0.960 - - - -
33. lrrtm4l1 ENSDARG00000080015 9 0.96 - - - - 0.960 - - - - leucine rich repeat transmembrane neuronal 4 like 1 [Source:ZFIN;Acc:ZDB-GENE-080327-15]
34. abhd13 ENSDARG00000059209 43 0.959 - - - - 0.959 - - - - abhydrolase domain containing 13 [Source:ZFIN;Acc:ZDB-GENE-051120-54]
35. si:ch211-218c6.9 si:ch211-218c6.9 40 0.958 - - - - 0.958 - - - -
36. U3_5 U3_5 67 0.956 - - - - 0.956 - - - -
37. colm colm 36 0.956 - - - - 0.956 - - - -
38. tph1a ENSDARG00000029432, ENSDARG00000114918 24 0.955 - - - - 0.955 - - - - tryptophan hydroxylase 1 (tryptophan 5-monooxygenase) a [Source:ZFIN;Acc:ZDB-GENE-030317-1]
39. si:dkey-253a1.2 si:dkey-253a1.2 52 0.95 - - - - 0.950 - - - -
40. wu:fi34b01 38 0.949 - - - - 0.949 - - - - wu:fi34b01
41. si:dkey-7e14.3 ENSDARG00000086055 50 0.949 - - - - 0.949 - - - - si:dkey-7e14.3 [Source:ZFIN;Acc:ZDB-GENE-121214-362]
42. enpep ENSDARG00000057064 84 0.948 - 0.948 - - - - - - - glutamyl aminopeptidase [Source:ZFIN;Acc:ZDB-GENE-050309-218]
43. mlpha ENSDARG00000070991, ENSDARG00000112518, ENSDARG00000114121 198 0.947 - - - - 0.947 - - - - melanophilin a [Source:ZFIN;Acc:ZDB-GENE-050208-724]
44. slc5a12 ENSDARG00000005004 15 0.946 0.946 - - - - - - - - solute carrier family 5 (sodium/monocarboxylate cotransporter), member 12 [Source:ZFIN;Acc:ZDB-GENE-040426-1343]
45. CU694368.1 CU694368.1 56 0.944 - - - - 0.944 - - - -
46. si:ch211-102c2.4 ENSDARG00000079387 101 0.944 - - - - 0.944 - - - - si:ch211-102c2.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8862]
47. zbtb43 ENSDARG00000045983 343 0.942 - - - - - 0.942 - - - zinc finger and BTB domain containing 43 [Source:ZFIN;Acc:ZDB-GENE-060526-378]
48. gnai3 ENSDARG00000030644 29 0.942 - - - - - 0.942 - - - guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-070713-6]
49. herc3 ENSDARG00000075887 41 0.94 - - - - 0.940 - - - - HECT and RLD domain containing E3 ubiquitin protein ligase 3 [Source:ZFIN;Acc:ZDB-GENE-090313-139]
50. SLC16A3 ENSDARG00000045051 83 0.938 - - - - 0.938 - - - - solute carrier family 16 (monocarboxylate transporter), member 3 [Source:ZFIN;Acc:ZDB-GENE-030131-5487]
51. CR524823.3 CR524823.3 124 0.938 0.938 - - - - - - - -
52. ntpcr ENSDARG00000021853 104 0.937 0.937 - - - - - - - - nucleoside-triphosphatase, cancer-related [Source:ZFIN;Acc:ZDB-GENE-040801-200]
53. gadd45aa ENSDARG00000043581 114 0.934 - - - - 0.934 - - - - growth arrest and DNA-damage-inducible, alpha, a [Source:ZFIN;Acc:ZDB-GENE-040426-1501]
54. tubgcp4 ENSDARG00000005374 208 0.934 - - - - - 0.934 - - - tubulin, gamma complex associated protein 4 [Source:ZFIN;Acc:ZDB-GENE-081022-124]
55. CABZ01054962.1 CABZ01054962.1 91 0.933 - - - - 0.933 - - - -
56. tor3a ENSDARG00000079308 142 0.932 - - - - 0.932 - - - - torsin family 3, member A [Source:ZFIN;Acc:ZDB-GENE-081104-165]
57. si:dkey-189o20.1 si:dkey-189o20.1 47 0.931 - - - - 0.931 - - - -
58. slc9a3.1 ENSDARG00000058498 46 0.931 - - - - 0.931 - - - - solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-060503-545]
59. si:ch211-135f11.1 166 0.931 - - - - 0.931 - - - - si:ch211-135f11.1, transcript variant X3
60. si:ch73-127k6.1 si:ch73-127k6.1 114 0.93 0.930 - - - - - - - -
61. CU681846.1 CU681846.1 86 0.93 - - - - 0.930 - - - -
62. SETD9 ENSDARG00000074456 66 0.929 - - - - 0.929 - - - - SET domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-120727-15]
63. si:dkey-32e6.3 ENSDARG00000092934 133 0.927 - - - - 0.927 - - - - si:dkey-32e6.3 [Source:ZFIN;Acc:ZDB-GENE-081104-408]
64. zdhhc23b ENSDARG00000003899, ENSDARG00000116894 31 0.925 - - - - - - 0.925 - - zinc finger, DHHC-type containing 23b [Source:ZFIN;Acc:ZDB-GENE-040808-13]
65. CU424462.2 CU424462.2 73 0.921 - - - - - 0.921 - - -
66. fam5ca fam5ca 76 0.921 - - - - 0.921 - - - -
67. CD44 CD44 11 0.921 - - - - - 0.921 - - -
68. MFAP4_7 MFAP4_7 43 0.921 - - - - 0.921 - - - -
69. TNFRSF11B ENSDARG00000098377 98 0.921 - - - - - 0.921 - - - tumor necrosis factor receptor superfamily, member 11b [Source:ZFIN;Acc:ZDB-GENE-081104-76]
70. stx5al ENSDARG00000003175 21 0.921 - - - - - - 0.921 - - syntaxin 5A, like [Source:ZFIN;Acc:ZDB-GENE-030131-1825]
71. chrnb3a ENSDARG00000052764, ENSDARG00000112769 139 0.92 - - - - 0.920 - - - - cholinergic receptor, nicotinic, beta polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-040108-1]
72. sema7a ENSDARG00000078707 70 0.919 - 0.919 - - - - - - - semaphorin 7A [Source:ZFIN;Acc:ZDB-GENE-030131-3633]
73. si:dkey-20l4.2 si:dkey-20l4.2 110 0.919 - 0.919 - - - - - - -
74. gphnb ENSDARG00000100851 118 0.919 - - - - 0.919 - - - - gephyrin b [Source:ZFIN;Acc:ZDB-GENE-070705-4]
75. ZNF365 ENSDARG00000087985 28 0.919 - - - - - 0.919 - - - zinc finger protein 365 [Source:ZFIN;Acc:ZDB-GENE-131121-260]
76. tmeff2b ENSDARG00000058699 82 0.919 0.919 - - - - - - - - transmembrane protein with EGF-like and two follistatin-like domains 2b [Source:ZFIN;Acc:ZDB-GENE-101001-4]
77. PEG3_10 PEG3_10 45 0.918 - - - - 0.918 - - - -
78. MPP3_1 MPP3_1 88 0.914 - - - - 0.914 - - - -
79. slx4 ENSDARG00000061414, ENSDARG00000093798 44 0.913 - - - - 0.913 - - - - SLX4 structure-specific endonuclease subunit homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050208-359]
80. si:dkey-122c11.9 si:dkey-122c11.9 227 0.912 0.912 - - - - - - - -
81. gp1bb ENSDARG00000074441 116 0.91 - - - - - - 0.910 - - glycoprotein Ib platelet subunit beta [Source:ZFIN;Acc:ZDB-GENE-081104-406]
82. g6pca.1 ENSDARG00000031616 401 0.908 - - - - 0.908 - - - - glucose-6-phosphatase a, catalytic subunit, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-031001-4]
83. CYP27A1_2 CYP27A1_2 5 0.907 - - - - - 0.907 - - -
84. kitlgb ENSDARG00000058042, ENSDARG00000116557 63 0.907 0.907 - - - - - - - - kit ligand b [Source:ZFIN;Acc:ZDB-GENE-070424-2]
85. lrrc4.2 ENSDARG00000003020 235 0.905 - - - - 0.905 - - - - leucine rich repeat containing 4.2 [Source:ZFIN;Acc:ZDB-GENE-030131-7997]
86. ZNF337_7 ZNF337_7 198 0.904 - - - - 0.904 - - - -
87. SYTL1 ENSDARG00000070094 282 0.904 - - - - 0.904 - - - - synaptotagmin-like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-439]
88. aarsd1 ENSDARG00000015747 145 0.902 - - - - 0.902 - - - - alanyl-tRNA synthetase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040801-91]
89. haus3 ENSDARG00000061385, ENSDARG00000110959 343 0.9 - - - - - 0.900 - - - HAUS augmin-like complex, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-060929-592]
90. chst14 ENSDARG00000043011 345 0.899 - 0.899 - - - - - - - carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14 [Source:ZFIN;Acc:ZDB-GENE-040401-3]
91. SLC16A13 ENSDARG00000055342 183 0.898 - - - - 0.898 - - - - solute carrier family 16, member 13 (monocarboxylic acid transporter 13) [Source:ZFIN;Acc:ZDB-GENE-120907-2]
92. foxk1 ENSDARG00000037872 147 0.897 - - - - 0.897 - - - - forkhead box K1 [Source:ZFIN;Acc:ZDB-GENE-030131-6402]
93. ZNF337_5 ZNF337_5 48 0.897 - - - - - 0.897 - - -
94. mhc1zea ENSDARG00000001470 184 0.896 - - - - 0.896 - - - - major histocompatibility complex class I ZEA [Source:ZFIN;Acc:ZDB-GENE-070705-176]
95. GPSM3 GPSM3 257 0.894 0.894 - - - - - - - -
96. slc2a12 ENSDARG00000036865, ENSDARG00000113590 148 0.893 - - - - 0.893 - - - - solute carrier family 2 (facilitated glucose transporter), member 12 [Source:ZFIN;Acc:ZDB-GENE-040426-1513]
97. C1S_1 C1S_1 11 0.893 - 0.893 - - - - - - -
98. isl2b ENSDARG00000053499 132 0.893 - 0.893 - - - - - - - ISL LIM homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-990415-133]
99. TRIM14_9 TRIM14_9 5 0.893 - 0.893 - - - - - - -
100. morn2 ENSDARG00000071360 44 0.893 - 0.893 - - - - - - - MORN repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-060825-230]

There are 670 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA