Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-56m15.4

Gene Name Gene ID Reads Annotation
si:dkey-56m15.4 si:dkey-56m15.4 39










Genes with expression patterns similar to si:dkey-56m15.4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-56m15.4 si:dkey-56m15.4 39 8 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 1.000
2. BX548021.2 BX548021.2 4 2 1.000 1.000 - - - - - - -
3. si:dkey-4j21.1 17 2 1.000 1.000 - - - - - - - si:dkey-4j21.1, transcript variant X2
4. si:ch211-10j20.7 si:ch211-10j20.7 8 2 1.000 1.000 - - - - - - -
5. si:dkey-191j3.2 ENSDARG00000101997 1 2 - 1.000 - - - - - 1.000 - si:dkey-191j3.2 [Source:ZFIN;Acc:ZDB-GENE-081103-55]
6. lppr5b lppr5b 23 2 1.000 1.000 - - - - - - -
7. si:dkey-56i24.1 ENSDARG00000053345, ENSDARG00000078152 11 2 1.000 1.000 - - - - - - - si:dkey-56i24.1 [Source:ZFIN;Acc:ZDB-GENE-081105-8]
8. PGBD4 ENSDARG00000079328 20 2 1.000 1.000 - - - - - - - piggyBac transposable element derived 4 [Source:ZFIN;Acc:ZDB-GENE-091204-417]
9. BX914198.1 BX914198.1 5 2 1.000 - - - - - - 1.000 -
10. CABZ01065506.1 CABZ01065506.1 204 2 1.000 1.000 - - - - - - -
11. NPBWR2 NPBWR2 132 1.935 1.000 - - - - - 0.935 - -
12. helt ENSDARG00000056400 482 1.896 1.000 0.896 - - - - - - - helt bHLH transcription factor [Source:ZFIN;Acc:ZDB-GENE-040824-6]
13. cnn1b ENSDARG00000102398 40 1.883 1.000 0.883 - - - - - - - calponin 1, basic, smooth muscle, b [Source:ZFIN;Acc:ZDB-GENE-091118-54]
14. PPFIA3 ENSDARG00000077053 310 1.879 0.879 1.000 - - - - - - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3 [Source:ZFIN;Acc:ZDB-GENE-100311-3]
15. TENM2 ENSDARG00000037122 48 1.878 0.878 1.000 - - - - - - - teneurin transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:29943]
16. kctd16a ENSDARG00000004648, ENSDARG00000114292, ENSDARG00000117199 80 1.874 0.874 1.000 - - - - - - - potassium channel tetramerization domain containing 16a [Source:ZFIN;Acc:ZDB-GENE-060117-1]
17. XKR7 ENSDARG00000026333 175 1.856 0.856 1.000 - - - - - - - XK, Kell blood group complex subunit-related family, member 7 [Source:ZFIN;Acc:ZDB-GENE-051113-336]
18. sprn2 ENSDARG00000057665, ENSDARG00000115640 69 1.854 0.854 1.000 - - - - - - - shadow of prion protein 2 [Source:ZFIN;Acc:ZDB-GENE-041221-1]
19. si:dkey-11c5.14 si:dkey-11c5.14 15 1.845 - 1.000 - 0.845 - - - - -
20. fubp3 ENSDARG00000086896 21 1.823 - - - - - - 0.976 0.847 - far upstream element (FUSE) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-041121-12]
21. GADD45G GADD45G 382 1.813 0.813 1.000 - - - - - - -
22. dio3a 19 1.793 0.850 - - - - - - 0.943 - deiodinase, iodothyronine, type IIIa
23. lpar6b ENSDARG00000069441 65 1.792 - 0.819 - - - - 0.973 - - lysophosphatidic acid receptor 6b [Source:ZFIN;Acc:ZDB-GENE-110408-67]
24. zgc:194665 ENSDARG00000004577 136 1.783 0.783 1.000 - - - - - - - zgc:194665 [Source:ZFIN;Acc:ZDB-GENE-080722-38]
25. p2rx4a ENSDARG00000044752, ENSDARG00000115637 9 1.772 - 1.000 - 0.772 - - - - - purinergic receptor P2X, ligand-gated ion channel, 4a [Source:ZFIN;Acc:ZDB-GENE-020806-2]
26. gpr22 gpr22 115 1.766 0.766 1.000 - - - - - - -
27. arl8 ENSDARG00000094709 6 1.766 - 1.000 - - - - - 0.766 - ADP-ribosylation factor-like 8 [Source:ZFIN;Acc:ZDB-GENE-030131-5762]
28. si:dkey-200l5.4 ENSDARG00000095294 13 1.764 1.000 - - 0.764 - - - - - si:dkey-200l5.4 [Source:ZFIN;Acc:ZDB-GENE-091204-393]
29. scin ENSDARG00000010728, ENSDARG00000111092 437 1.752 0.752 1.000 - - - - - - - scinderin [Source:ZFIN;Acc:ZDB-GENE-060503-6]
30. CSMD1 CSMD1 15 1.731 1.000 0.731 - - - - - - -
31. FRMPD3 ENSDARG00000074865, ENSDARG00000109705 276 1.73 0.730 1.000 - - - - - - - FERM and PDZ domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-100316-9]
32. AKIP1 ENSDARG00000069037, ENSDARG00000111207, ENSDARG00000115020 351 1.718 0.872 - - - - - 0.846 - - A kinase (PRKA) interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-030829-24]
33. rtn4r ENSDARG00000090035 46 1.709 1.000 0.709 - - - - - - - reticulon 4 receptor [Source:ZFIN;Acc:ZDB-GENE-040310-1]
34. ptprc ENSDARG00000071437 104 1.704 1.000 0.704 - - - - - - - protein tyrosine phosphatase, receptor type, C [Source:ZFIN;Acc:ZDB-GENE-050208-585]
35. CABZ01029822.1 ENSDARG00000086931 1654 1.679 0.883 0.796 - - - - - - - uncharacterized LOC100004582 [Source:NCBI gene;Acc:100004582]
36. cnih3 ENSDARG00000014953 25 1.67 0.939 0.731 - - - - - - - cornichon family AMPA receptor auxiliary protein 3 [Source:ZFIN;Acc:ZDB-GENE-041001-180]
37. alkbh6 ENSDARG00000077253 117 1.668 0.786 - - - - - 0.882 - - alkB homolog 6 [Source:ZFIN;Acc:ZDB-GENE-060407-1]
38. zgc:158291 ENSDARG00000044375, ENSDARG00000111929 621 1.648 0.826 0.822 - - - - - - - zgc:158291 [Source:ZFIN;Acc:ZDB-GENE-061215-70]
39. si:dkey-4c15.16 ENSDARG00000097261 154 1.643 - - - - - - 0.927 - 0.716 si:dkey-4c15.16 [Source:ZFIN;Acc:ZDB-GENE-050420-215]
40. pgls ENSDARG00000021233 264 1.619 - 0.709 - - - - 0.910 - - 6-phosphogluconolactonase [Source:ZFIN;Acc:ZDB-GENE-040822-9]
41. zswim7 ENSDARG00000067608 179 1.583 - 0.713 - - - - 0.870 - - zinc finger, SWIM-type containing 7 [Source:ZFIN;Acc:ZDB-GENE-030131-4255]
42. grnas ENSDARG00000091885 71 1.583 - 0.731 - - - - - 0.852 - granulin antisense [Source:ZFIN;Acc:ZDB-GENE-060104-1]
43. EIF4G3 EIF4G3 24 1.582 - 0.713 - - - - - 0.869 -
44. FAM69A FAM69A 28 1.535 - 0.713 - 0.822 - - - - -
45. cnr1 ENSDARG00000009020 33 1.506 0.802 - - 0.704 - - - - - cannabinoid receptor 1 [Source:ZFIN;Acc:ZDB-GENE-040312-3]
46. upf3a ENSDARG00000069297, ENSDARG00000111067 196 1.506 0.752 0.754 - - - - - - - UPF3A, regulator of nonsense mediated mRNA decay [Source:ZFIN;Acc:ZDB-GENE-060721-2]
47. atp2b3b ENSDARG00000023445 1424 1.503 0.787 0.716 - - - - - - - ATPase plasma membrane Ca2+ transporting 3b [Source:ZFIN;Acc:ZDB-GENE-080409-2]
48. syngr3b ENSDARG00000025034 290 1.44 0.721 0.719 - - - - - - - synaptogyrin 3b [Source:ZFIN;Acc:ZDB-GENE-070822-6]
49. pdp2 ENSDARG00000058571, ENSDARG00000115915 464 1.424 - 0.710 - - - - 0.714 - - putative pyruvate dehydrogenase phosphatase isoenzyme 2 [Source:ZFIN;Acc:ZDB-GENE-000921-2]
50. dsel dsel 96 1.424 - 0.711 - 0.713 - - - - -
51. vwf ENSDARG00000077231 5 1 - - - - - - - 1.000 - von Willebrand factor [Source:ZFIN;Acc:ZDB-GENE-070103-1]
52. CR762480.3 CR762480.3 3 1 - 1.000 - - - - - - -
53. ppm1f ENSDARG00000005786, ENSDARG00000109839 25 1 - 1.000 - - - - - - - protein phosphatase, Mg2+/Mn2+ dependent, 1F [Source:ZFIN;Acc:ZDB-GENE-051128-2]
54. CT030048.2 CT030048.2 3 1 - 1.000 - - - - - - -
55. MSRA ENSDARG00000029587 30 1 - 1.000 - - - - - - - methionine sulfoxide reductase A [Source:ZFIN;Acc:ZDB-GENE-041014-344]
56. CABZ01021433.1 ENSDARG00000105696 74 1 1.000 - - - - - - - - si:cabz01021433.2 [Source:NCBI gene;Acc:100333857]
57. CR556708.1 ENSDARG00000100565 6 1 - 1.000 - - - - - - - uncharacterized LOC110437832 [Source:NCBI gene;Acc:110437832]
58. si:ch73-91k6.8 si:ch73-91k6.8 37 1 - 1.000 - - - - - - -
59. si:dkey-274m14.3 si:dkey-274m14.3 7 1 1.000 - - - - - - - -
60. cthrc1b ENSDARG00000001971 44 1 - 1.000 - - - - - - - collagen triple helix repeat containing 1b [Source:ZFIN;Acc:ZDB-GENE-050420-46]
61. pappa2 ENSDARG00000076020 89 1 - 1.000 - - - - - - - pappalysin 2 [Source:ZFIN;Acc:ZDB-GENE-070912-525]
62. prdm11 ENSDARG00000074468 2 1 1.000 - - - - - - - - PR domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-061221-1]
63. SEMA6B SEMA6B 35 1 - 1.000 - - - - - - -
64. gnrh3 ENSDARG00000056214, ENSDARG00000112890 226 1 - 1.000 - - - - - - - gonadotropin-releasing hormone 3 [Source:ZFIN;Acc:ZDB-GENE-030724-4]
65. amn1 ENSDARG00000070478, ENSDARG00000111705 72 1 - 1.000 - - - - - - - antagonist of mitotic exit network 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060825-13]
66. CR352260.1 CR352260.1 11 1 - 1.000 - - - - - - -
67. CABZ01059406.1 ENSDARG00000088775 1 1 1.000 - - - - - - - -
68. rgs5b ENSDARG00000017860 55 1 - 1.000 - - - - - - - regulator of G protein signaling 5b [Source:ZFIN;Acc:ZDB-GENE-050417-359]
69. SNORA31 SNORA31 23 1 1.000 - - - - - - - -
70. gdf10a ENSDARG00000095378 12 1 - 1.000 - - - - - - - growth differentiation factor 10a [Source:ZFIN;Acc:ZDB-GENE-090312-17]
71. kcnip3a ENSDARG00000034229 63 1 - 1.000 - - - - - - - Kv channel interacting protein 3a, calsenilin [Source:ZFIN;Acc:ZDB-GENE-040426-1791]
72. SERINC3 SERINC3 21 1 - 1.000 - - - - - - -
73. dnah1 ENSDARG00000100115 17 1 - 1.000 - - - - - - - dynein, axonemal, heavy chain 1 [Source:ZFIN;Acc:ZDB-GENE-081015-3]
74. xkr8.1 ENSDARG00000004498 18 1 1.000 - - - - - - - - XK, Kell blood group complex subunit-related family, member 8, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-110106-1]
75. si:ch73-27e22.7 ENSDARG00000093345 2 1 - 1.000 - - - - - - - si:ch73-27e22.7 [Source:ZFIN;Acc:ZDB-GENE-070705-235]
76. star ENSDARG00000006137 149 1 - 1.000 - - - - - - - steroidogenic acute regulatory protein [Source:ZFIN;Acc:ZDB-GENE-001120-3]
77. SNORD57 SNORD57 2 1 - - - - - - - 1.000 -
78. si:dkey-31e10.5 ENSDARG00000070502 4 1 - 1.000 - - - - - - - si:dkey-31e10.5 [Source:ZFIN;Acc:ZDB-GENE-121214-76]
79. GPR22 GPR22 33 1 1.000 - - - - - - - -
80. BX321871.2 BX321871.2 1 1 - 1.000 - - - - - - -
81. PEG3_17 PEG3_17 15 1 - - - - - - - 1.000 -
82. olig3 ENSDARG00000074253 84 1 - 1.000 - - - - - - - oligodendrocyte transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-080903-1]
83. si:ch73-29c22.1 ENSDARG00000090948 5 1 1.000 - - - - - - - - si:ch73-29c22.1 [Source:ZFIN;Acc:ZDB-GENE-091204-309]
84. asic1b ENSDARG00000101866 61 1 1.000 - - - - - - - - acid-sensing (proton-gated) ion channel 1b [Source:ZFIN;Acc:ZDB-GENE-040513-1]
85. BX663520.1 ENSDARG00000097950 4 1 - - - - - - - 1.000 -
86. si:ch73-346o4.3 si:ch73-346o4.3 29 1 - 1.000 - - - - - - -
87. rbm10 ENSDARG00000077400 1 1 1.000 - - - - - - - - RNA binding motif protein 10 [Source:ZFIN;Acc:ZDB-GENE-100922-245]
88. WNK3 WNK3 36 1 - 1.000 - - - - - - -
89. soga3a ENSDARG00000063311, ENSDARG00000088571, ENSDARG00000097245 11 1 1.000 - - - - - - - - SOGA family member 3a [Source:ZFIN;Acc:ZDB-GENE-100921-84]
90. CABZ01021454.2 CABZ01021454.2 3 1 1.000 - - - - - - - -
91. BX323861.1 ENSDARG00000099765 37 1 1.000 - - - - - - - -
92. zdhhc18a ENSDARG00000069807 8 1 - 1.000 - - - - - - - zinc finger, DHHC-type containing 18a [Source:ZFIN;Acc:ZDB-GENE-060929-424]
93. ME1 ENSDARG00000053215 8 1 - 1.000 - - - - - - - malic enzyme 1, NADP(+)-dependent, cytosolic [Source:ZFIN;Acc:ZDB-GENE-061013-438]
94. aldh1a3 ENSDARG00000076933 95 1 - 1.000 - - - - - - - aldehyde dehydrogenase 1 family, member A3 [Source:ZFIN;Acc:ZDB-GENE-061128-2]
95. MAMDC4 MAMDC4 3 1 1.000 - - - - - - - -
96. nitr3a_1 ENSDARG00000110676 44 1 - 1.000 - - - - - - - novel immune-type receptor 3a [Source:NCBI gene;Acc:60649]
97. CR936967.1 CR936967.1 2 1 1.000 - - - - - - - -
98. SACS ENSDARG00000091042 15 1 - 1.000 - - - - - - - sacsin molecular chaperone [Source:ZFIN;Acc:ZDB-GENE-110411-146]
99. pcsk5a ENSDARG00000067537 44 1 - 1.000 - - - - - - - proprotein convertase subtilisin/kexin type 5a [Source:ZFIN;Acc:ZDB-GENE-060531-130]
100. CR376785.2 CR376785.2 175 1 - 1.000 - - - - - - -

There are 1500 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA