Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-56e3.3

Gene Name Gene ID Reads Annotation
si:dkey-56e3.3 ENSDARG00000075194 491 si:dkey-56e3.3 [Source:ZFIN;Acc:ZDB-GENE-050411-91]










Genes with expression patterns similar to si:dkey-56e3.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-56e3.3 ENSDARG00000075194 491 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:dkey-56e3.3 [Source:ZFIN;Acc:ZDB-GENE-050411-91]
2. dmbx1b ENSDARG00000002510 351 2.438 - 0.761 - 0.787 - - 0.890 - - diencephalon/mesencephalon homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-050417-97]
3. PARP12 PARP12 77 1.774 - - - 0.885 - - 0.889 - -
4. si:ch73-387e10.3 si:ch73-387e10.3 517 1.72 - - - 0.836 - - 0.884 - -
5. ngf ngf 278 1.716 - 0.906 - - - - 0.810 - -
6. HTRA4 ENSDARG00000005943 77 1.696 - 0.807 - 0.889 - - - - - HtrA serine peptidase 4 [Source:ZFIN;Acc:ZDB-GENE-131120-192]
7. DIP2C DIP2C 222 1.678 - - - 0.872 - - 0.806 - -
8. sorbs2a ENSDARG00000003046 242 1.676 - 0.791 - 0.885 - - - - - sorbin and SH3 domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-070308-2]
9. ercc3 ENSDARG00000002402 340 1.672 - 0.817 - 0.855 - - - - - excision repair cross-complementation group 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3043]
10. CPLX1 CPLX1 386 1.661 - 0.896 - - - - 0.765 - -
11. pde4cb ENSDARG00000002411 63 1.653 - 0.744 - - - - 0.909 - - phosphodiesterase 4C, cAMP-specific b [Source:ZFIN;Acc:ZDB-GENE-030131-4075]
12. ftr24 ENSDARG00000008396, ENSDARG00000112253 1652 1.65 0.815 - - - - - 0.835 - - finTRIM family, member 24 [Source:ZFIN;Acc:ZDB-GENE-050731-2]
13. rexo1 ENSDARG00000026986 770 1.65 0.770 - - 0.880 - - - - - REX1, RNA exonuclease 1 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-1650]
14. ch25hl1.1 ENSDARG00000039381, ENSDARG00000109469, ENSDARG00000113169 838 1.641 - 0.807 - 0.834 - - - - - cholesterol 25-hydroxylase like 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8617]
15. tpm4b ENSDARG00000019128 450 1.631 0.841 0.790 - - - - - - - tropomyosin 4b [Source:ZFIN;Acc:ZDB-GENE-030131-2964]
16. DTX3 DTX3 303 1.625 - - - 0.873 - 0.752 - - -
17. CDKN1C CDKN1C 667 1.61 - 0.735 - 0.875 - - - - -
18. crcp ENSDARG00000069373 730 1.606 - - - - - 0.734 0.872 - - calcitonin gene-related peptide-receptor component protein [Source:ZFIN;Acc:ZDB-GENE-060825-150]
19. si:ch211-10a23.2 ENSDARG00000060656 471 1.596 - 0.775 - 0.821 - - - - - si:ch211-10a23.2 [Source:ZFIN;Acc:ZDB-GENE-090313-9]
20. spns2 ENSDARG00000061017, ENSDARG00000114768 301 1.595 - - - 0.883 - - 0.712 - - spinster homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-5843]
21. lbx2 ENSDARG00000025131 1388 1.592 0.849 - - 0.743 - - - - - ladybird homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-001206-2]
22. znhit2 ENSDARG00000030805 197 1.59 - 0.710 - 0.880 - - - - - zinc finger, HIT-type containing 2 [Source:ZFIN;Acc:ZDB-GENE-061103-46]
23. si:dkeyp-117b11.2 ENSDARG00000076419 143 1.589 0.778 - - - - - 0.811 - - si:dkeyp-117b11.2 [Source:ZFIN;Acc:ZDB-GENE-081104-454]
24. si:ch73-299h12.6 ENSDARG00000101319 373 1.581 0.746 - - - - - 0.835 - - si:ch73-299h12.6 [Source:ZFIN;Acc:ZDB-GENE-081031-44]
25. gtf2a2 ENSDARG00000053685, ENSDARG00000109493, ENSDARG00000113094 515 1.578 - - - 0.817 - 0.761 - - - general transcription factor IIA, 2 [Source:ZFIN;Acc:ZDB-GENE-050522-513]
26. vps39 ENSDARG00000074471 684 1.573 - - - 0.786 - - 0.787 - - vacuolar protein sorting 39 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-080530-2]
27. snai1a ENSDARG00000056995 1427 1.562 - - - 0.720 - - 0.842 - - snail family zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-990415-255]
28. sirt6 ENSDARG00000102963 766 1.544 0.782 - - - - - 0.762 - - sirtuin 6 [Source:ZFIN;Acc:ZDB-GENE-031007-2]
29. adamts9 ENSDARG00000077778 419 1.543 - 0.799 - - - - 0.744 - - ADAM metallopeptidase with thrombospondin type 1 motif, 9 [Source:ZFIN;Acc:ZDB-GENE-070814-6]
30. tmem57a 861 1.54 - - - - - 0.742 0.798 - - transmembrane protein 57a
31. gna13b ENSDARG00000037924 1963 1.54 - 0.716 - 0.824 - - - - - guanine nucleotide binding protein (G protein), alpha 13b [Source:ZFIN;Acc:ZDB-GENE-030131-8277]
32. FP236334.1 FP236334.1 345 1.535 0.733 - - - - - 0.802 - -
33. ephb3a ENSDARG00000031548 1872 1.535 - 0.755 - 0.780 - - - - - eph receptor B3a [Source:ZFIN;Acc:ZDB-GENE-990415-60]
34. creb1b ENSDARG00000093420 524 1.531 0.718 - - 0.813 - - - - - cAMP responsive element binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-050417-355]
35. nr6a1b ENSDARG00000014480 575 1.53 - - - 0.757 - - 0.773 - - nuclear receptor subfamily 6, group A, member 1b [Source:ZFIN;Acc:ZDB-GENE-040724-202]
36. RSF1 RSF1 1242 1.522 - - - - - 0.715 0.807 - -
37. kifap3a ENSDARG00000008639 721 1.521 0.766 - - 0.755 - - - - - kinesin-associated protein 3a [Source:ZFIN;Acc:ZDB-GENE-040912-74]
38. trove2 ENSDARG00000089225 430 1.515 - 0.785 - - - 0.730 - - - TROVE domain family, member 2 [Source:ZFIN;Acc:ZDB-GENE-051113-300]
39. dhx9 ENSDARG00000079725 1241 1.509 - - - 0.790 - 0.719 - - - DEAH (Asp-Glu-Ala-His) box helicase 9 [Source:ZFIN;Acc:ZDB-GENE-070912-171]
40. ttc14 ENSDARG00000013845 1192 1.508 - - - 0.791 - - 0.717 - - tetratricopeptide repeat domain 14 [Source:ZFIN;Acc:ZDB-GENE-050327-26]
41. CCDC80 ENSDARG00000000002 413 1.493 - - - - - 0.709 0.784 - - coiled-coil domain containing 80 [Source:ZFIN;Acc:ZDB-GENE-030616-56]
42. gnpnat1 ENSDARG00000039892 709 1.487 - - - 0.758 - - 0.729 - - glucosamine-phosphate N-acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-050522-450]
43. zgc:193742 ENSDARG00000092387, ENSDARG00000115140, ENSDARG00000116906 653 1.471 - - - - - 0.706 0.765 - - zgc:193742 [Source:ZFIN;Acc:ZDB-GENE-081022-37]
44. vps36 ENSDARG00000057021 636 1.462 - 0.708 - - - - 0.754 - - vacuolar protein sorting 36 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-7753]
45. larp7 ENSDARG00000017315 1194 1.456 - - - 0.750 - 0.706 - - - La ribonucleoprotein domain family, member 7 [Source:ZFIN;Acc:ZDB-GENE-030131-6896]
46. CABIN1 ENSDARG00000079326 905 1.433 - - - 0.720 - 0.713 - - - calcineurin binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1735]
47. si:dkey-240e12.6 ENSDARG00000110137 674 1.424 0.706 - - 0.718 - - - - - si:dkey-240e12.6 [Source:ZFIN;Acc:ZDB-GENE-050208-367]
48. rab6ba ENSDARG00000034522 495 1.419 - 0.716 - - - - 0.703 - - RAB6B, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-050809-136]
49. utp3 ENSDARG00000056720 922 0.959 - - - - - - 0.959 - - UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040912-163]
50. bcl7ba ENSDARG00000111877 3696 0.958 - - - - - - 0.958 - - BCL tumor suppressor 7Ba [Source:ZFIN;Acc:ZDB-GENE-040426-2193]
51. dhx57 ENSDARG00000057660 390 0.938 - - - - - - 0.938 - - DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57 [Source:ZFIN;Acc:ZDB-GENE-030131-4078]
52. cdca5 ENSDARG00000044437 2041 0.937 - - - - - - 0.937 - - cell division cycle associated 5 [Source:ZFIN;Acc:ZDB-GENE-030131-235]
53. slc17a9b ENSDARG00000011049 231 0.937 - - - - - - 0.937 - - solute carrier family 17 (vesicular nucleotide transporter), member 9b [Source:ZFIN;Acc:ZDB-GENE-040718-380]
54. wnt7bb ENSDARG00000071107 1158 0.937 - - - - - - 0.937 - - wingless-type MMTV integration site family, member 7Bb [Source:ZFIN;Acc:ZDB-GENE-081006-1]
55. dpy19l1l ENSDARG00000069995 584 0.933 - - - - - - 0.933 - - dpy-19-like 1, like (H. sapiens) [Source:ZFIN;Acc:ZDB-GENE-030521-11]
56. CT956064.4 CT956064.4 541 0.932 - - - - - - 0.932 - -
57. tlr5b ENSDARG00000052322 86 0.929 - - - - - - 0.929 - - toll-like receptor 5b [Source:ZFIN;Acc:ZDB-GENE-040219-15]
58. lsm1 ENSDARG00000043177 767 0.929 - - - - - - 0.929 - - LSM1, U6 small nuclear RNA associated [Source:ZFIN;Acc:ZDB-GENE-040801-68]
59. chst13 chst13 669 0.927 - - - - - - 0.927 - -
60. ssbp3a ENSDARG00000058237 87 0.923 - - - - - - 0.923 - - single stranded DNA binding protein 3a [Source:ZFIN;Acc:ZDB-GENE-070705-484]
61. CABZ01102038.1 ENSDARG00000116210 132 0.923 - - - - - - 0.923 - - growth arrest-specific 7b [Source:NCBI gene;Acc:100333627]
62. SDK2 SDK2 145 0.922 - - - - - - 0.922 - -
63. NARS2 ENSDARG00000098441 57 0.922 - - - - - - 0.922 - - asparaginyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-060929-596]
64. kcnk13a ENSDARG00000008212 136 0.92 - - - - - - 0.920 - - potassium channel, subfamily K, member 13a [Source:ZFIN;Acc:ZDB-GENE-080219-46]
65. tango6 ENSDARG00000034001 203 0.92 - - - - - - 0.920 - - transport and golgi organization 6 homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050419-237]
66. tnfaip3 ENSDARG00000027777 1066 0.919 - - - - - - 0.919 - - tumor necrosis factor, alpha-induced protein 3 [Source:ZFIN;Acc:ZDB-GENE-100212-2]
67. opa1 ENSDARG00000070801 57 0.918 - 0.918 - - - - - - - optic atrophy 1 (autosomal dominant) [Source:ZFIN;Acc:ZDB-GENE-041114-7]
68. tnip1 ENSDARG00000015653 94 0.917 - - - - - - 0.917 - - TNFAIP3 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-070112-1502]
69. zbtb44 ENSDARG00000061110, ENSDARG00000116194 1106 0.916 - - - 0.916 - - - - - zinc finger and BTB domain containing 44 [Source:ZFIN;Acc:ZDB-GENE-060526-201]
70. MPZL2 MPZL2 31 0.916 - - - - - - 0.916 - -
71. abcb9 ENSDARG00000056200, ENSDARG00000109326 63 0.916 - - - - - - 0.916 - - ATP-binding cassette, sub-family B (MDR/TAP), member 9 [Source:ZFIN;Acc:ZDB-GENE-050517-12]
72. lhx2b ENSDARG00000031222 517 0.916 - - - - - - 0.916 - - LIM homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-051220-1]
73. map1lc3c ENSDARG00000100528 31 0.915 - - - - - - 0.915 - - microtubule-associated protein 1 light chain 3 gamma [Source:ZFIN;Acc:ZDB-GENE-040426-1080]
74. atp1a1a.2 ENSDARG00000007739 121 0.915 - - - - - - 0.915 - - ATPase Na+/K+ transporting subunit alpha 1a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-001212-2]
75. BX548000.1 ENSDARG00000099044 45 0.915 - - - - - - 0.915 - -
76. spata2 ENSDARG00000063250 501 0.915 - - - - - - 0.915 - - spermatogenesis associated 2 [Source:ZFIN;Acc:ZDB-GENE-070822-5]
77. spi1a ENSDARG00000067797 113 0.915 - - - - - - 0.915 - - Spi-1 proto-oncogene a [Source:ZFIN;Acc:ZDB-GENE-060825-351]
78. zfyve26 ENSDARG00000040131 87 0.915 - - - - - - 0.915 - - zinc finger, FYVE domain containing 26 [Source:ZFIN;Acc:ZDB-GENE-030131-3286]
79. zgc:101788 zgc:101788 9 0.915 - - - - - - 0.915 - -
80. epd ENSDARG00000103498, ENSDARG00000117020 84 0.915 - - - - - - 0.915 - - ependymin [Source:ZFIN;Acc:ZDB-GENE-980526-111]
81. plcd1a ENSDARG00000059123 46 0.915 - - - - - - 0.915 - - phospholipase C, delta 1a [Source:ZFIN;Acc:ZDB-GENE-071004-78]
82. LRRC10B 94 0.915 - - - - - - 0.915 - - leucine rich repeat containing 10B
83. bicc1b ENSDARG00000070497 406 0.914 - - - - - - 0.914 - - BicC family RNA binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-080522-3]
84. si:dkey-6f10.3 ENSDARG00000093660 116 0.913 - - - - - - 0.913 - - si:dkey-6f10.3 [Source:ZFIN;Acc:ZDB-GENE-041210-339]
85. gb:bc139653 gb:bc139653 239 0.913 - - - - - - 0.913 - -
86. znf366 ENSDARG00000040116 168 0.912 - - - - - - 0.912 - - zinc finger protein 366 [Source:ZFIN;Acc:ZDB-GENE-110408-46]
87. NPM2 NPM2 41 0.912 - - - - - - 0.912 - -
88. rnmtl1a 112 0.911 - - - - - - 0.911 - - RNA methyltransferase like 1a
89. wnt7aa ENSDARG00000044827 645 0.909 - - - - - - 0.909 - - wingless-type MMTV integration site family, member 7Aa [Source:ZFIN;Acc:ZDB-GENE-051129-1]
90. trpc5a ENSDARG00000070504 5 0.909 - - - - - - 0.909 - - transient receptor potential cation channel, subfamily C, member 5a [Source:ZFIN;Acc:ZDB-GENE-040812-1]
91. si:ch211-286b5.9 ENSDARG00000086166 27 0.909 - - - - - - 0.909 - - si:ch211-286b5.9 [Source:ZFIN;Acc:ZDB-GENE-121214-63]
92. FBXO4 ENSDARG00000074170 54 0.909 - - - - - - 0.909 - - F-box protein 4 [Source:ZFIN;Acc:ZDB-GENE-081104-415]
93. f7i ENSDARG00000075827 4 0.909 - - - - - - 0.909 - - coagulation factor VIIi [Source:ZFIN;Acc:ZDB-GENE-021206-10]
94. CU467646.1 ENSDARG00000075090 27 0.909 - - - - - - 0.909 - - mucin-5AC-like [Source:NCBI gene;Acc:110439410]
95. CLDN10_1 CLDN10_1 71 0.909 - - - - - - 0.909 - -
96. si:ch73-70k4.1 ENSDARG00000075915 69 0.909 - - - - - - 0.909 - - si:ch73-70k4.1 [Source:ZFIN;Acc:ZDB-GENE-030131-3788]
97. si:dkeyp-46h3.3 ENSDARG00000092887 11 0.909 - - - - - - 0.909 - - si:dkeyp-46h3.3 [Source:ZFIN;Acc:ZDB-GENE-060503-748]
98. hist2h3c_1 ENSDARG00000094154 45 0.909 - - - - - - 0.909 - - histone cluster 2, H3c [Source:ZFIN;Acc:ZDB-GENE-070424-8]
99. slco1c1 ENSDARG00000016749 30 0.909 - - - - - - 0.909 - - solute carrier organic anion transporter family, member 1C1 [Source:ZFIN;Acc:ZDB-GENE-041210-50]
100. rln1 ENSDARG00000103762 8 0.909 - - - - - - 0.909 - - relaxin 1 [Source:ZFIN;Acc:ZDB-GENE-120215-201]

There are 1339 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA