Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-54i3.3_2

Gene Name Gene ID Reads Annotation
si:dkey-54i3.3_2 si:dkey-54i3.3_2 59










Genes with expression patterns similar to si:dkey-54i3.3_2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-54i3.3_2 si:dkey-54i3.3_2 59 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. st6galnac1.1 ENSDARG00000043814 95 1.836 - 1.000 - - - - 0.836 - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-041014-160]
3. slc12a2 ENSDARG00000104573 59 1.821 - 1.000 - - - - 0.821 - - solute carrier family 12 (sodium/potassium/chloride transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-040625-53]
4. ctskl ctskl 17 1.797 - 1.000 0.797 - - - - - -
5. il1rapl1b ENSDARG00000104853 52 1.793 0.793 1.000 - - - - - - - interleukin 1 receptor accessory protein-like 1b [Source:ZFIN;Acc:ZDB-GENE-090109-2]
6. USH1G USH1G 25 1.792 - 1.000 0.792 - - - - - -
7. si:ch73-338a16.3 ENSDARG00000101159 18 1.781 - 0.834 - - - - 0.947 - - si:ch73-338a16.3 [Source:ZFIN;Acc:ZDB-GENE-120215-227]
8. zgc:193690 34 1.775 - 1.000 0.775 - - - - - - zgc:193690
9. PEG3_22 PEG3_22 33 1.763 - - 0.826 - - - 0.937 - -
10. cpb1 ENSDARG00000045442, ENSDARG00000110762 22 1.754 - 1.000 - - - 0.754 - - - carboxypeptidase B1 (tissue) [Source:ZFIN;Acc:ZDB-GENE-030131-1132]
11. CABZ01112210.1 CABZ01112210.1 48 1.732 - 0.831 - - - - 0.901 - -
12. cabp2a ENSDARG00000052016 19 1.702 - 1.000 - - - 0.702 - - - calcium binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-050913-25]
13. si:ch211-286e11.3 si:ch211-286e11.3 20 1.694 - 0.747 - - - - 0.947 - -
14. ccdc113 ENSDARG00000006981 67 1.678 - - 0.853 - 0.825 - - - - coiled-coil domain containing 113 [Source:ZFIN;Acc:ZDB-GENE-041010-163]
15. atg9b ENSDARG00000055292 155 1.652 - - - - - 0.702 0.950 - - autophagy related 9B [Source:ZFIN;Acc:ZDB-GENE-091111-3]
16. zgc:172051 ENSDARG00000086569 12 1.649 - - - - - 0.702 0.947 - - zgc:172051 [Source:ZFIN;Acc:ZDB-GENE-080219-23]
17. si:ch1073-418f12.2 si:ch1073-418f12.2 15 1.643 - - - - - 0.702 0.941 - -
18. mvd mvd 105 1.64 - - - - - 0.901 0.739 - -
19. NARS2 ENSDARG00000098441 57 1.608 - 0.906 - - - 0.702 - - - asparaginyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-060929-596]
20. SLC15A5 ENSDARG00000089974 18 1.604 - 0.887 - - - - - - 0.717 solute carrier family 15 member 5 [Source:HGNC Symbol;Acc:HGNC:33455]
21. zgc:158464 ENSDARG00000100342 18 1.579 - 0.712 - - - - 0.867 - - zgc:158464 [Source:ZFIN;Acc:ZDB-GENE-070112-432]
22. ak7b ENSDARG00000017023 25 1.575 - 0.747 0.828 - - - - - - adenylate kinase 7b [Source:ZFIN;Acc:ZDB-GENE-050309-170]
23. C20H2orf70 C20H2orf70 8 1.572 - - 0.838 - - - - - 0.734
24. CDH24_1 CDH24_1 7 1.522 - - 0.820 - - 0.702 - - -
25. si:ch73-196i15.3 ENSDARG00000094281 1005 1.512 - 0.806 - - 0.706 - - - - si:ch73-196i15.3 [Source:ZFIN;Acc:ZDB-GENE-091116-4]
26. efemp2b_1 ENSDARG00000020811 77 1.493 - 0.721 - - - - - - 0.772 EGF containing fibulin extracellular matrix protein 2b [Source:ZFIN;Acc:ZDB-GENE-030219-125]
27. CABZ01039859.1 ENSDARG00000076361 540 1.485 - - 0.759 - - - 0.726 - - beta-1,4 N-acetylgalactosaminyltransferase 2-like [Source:NCBI gene;Acc:100333855]
28. CABZ01054965.1 ENSDARG00000090844 74 1.47 - 0.767 - - - 0.703 - - - interleukin-1 receptor type 1-like [Source:NCBI gene;Acc:799279]
29. pcdh1a6 ENSDARG00000097170 6 1.437 - - - - - - - 0.703 0.734 protocadherin 1 alpha 6 [Source:ZFIN;Acc:ZDB-GENE-050203-2]
30. CR450736.2 CR450736.2 5 1.432 - 0.729 - - - - - 0.703 -
31. si:dkeyp-51b9.3 ENSDARG00000092379 1374 1.427 - 0.721 - - - - 0.706 - - si:dkeyp-51b9.3 [Source:ZFIN;Acc:ZDB-GENE-081104-469]
32. xrra1 ENSDARG00000089578 18 1.424 - - 0.722 - - 0.702 - - - X-ray radiation resistance associated 1 [Source:ZFIN;Acc:ZDB-GENE-101216-2]
33. si:ch211-113a14.29 48 1.405 - - - - - 0.702 - 0.703 - si:ch211-113a14.29
34. si:dkeyp-82a1.2 ENSDARG00000094192 2 1 - 1.000 - - - - - - - si:dkeyp-82a1.2 [Source:ZFIN;Acc:ZDB-GENE-081104-475]
35. si:dkey-4i23.7 si:dkey-4i23.7 19 1 - 1.000 - - - - - - -
36. AL844567.1_1 AL844567.1_1 34 1 - 1.000 - - - - - - -
37. si:ch73-44m9.3 ENSDARG00000040640, ENSDARG00000100357 3 1 - 1.000 - - - - - - - si:ch73-44m9.3 [Source:ZFIN;Acc:ZDB-GENE-081104-290]
38. rnf217 ENSDARG00000060944 10 1 - 1.000 - - - - - - - ring finger protein 217 [Source:ZFIN;Acc:ZDB-GENE-060503-400]
39. fam213ab 1 1 - 1.000 - - - - - - - family with sequence similarity 213, member Ab
40. C24H8orf34 C24H8orf34 1 1 - 1.000 - - - - - - -
41. ankar ENSDARG00000000516 3 1 - 1.000 - - - - - - - ankyrin and armadillo repeat containing [Source:ZFIN;Acc:ZDB-GENE-030616-533]
42. prrt1 ENSDARG00000062208 368 1 - 1.000 - - - - - - - proline-rich transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-060503-686]
43. glra4b ENSDARG00000058103 0 1 - 1.000 - - - - - - - glycine receptor, alpha 4b [Source:ZFIN;Acc:ZDB-GENE-020402-2]
44. CU928220.1 CU928220.1 146 1 - 1.000 - - - - - - -
45. slc17a8 ENSDARG00000057728, ENSDARG00000109791 8 1 - 1.000 - - - - - - - solute carrier family 17 (vesicular glutamate transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-060503-416]
46. CABZ01038708.1 CABZ01038708.1 28 1 - 1.000 - - - - - - -
47. si:ch211-120c15.3 ENSDARG00000101807 19 1 - 1.000 - - - - - - - si:ch211-120c15.3 [Source:ZFIN;Acc:ZDB-GENE-110913-99]
48. PPP2R5B ENSDARG00000054931 213 1 - 1.000 - - - - - - - protein phosphatase 2, regulatory subunit B', beta [Source:ZFIN;Acc:ZDB-GENE-101208-1]
49. CU207301.2 ENSDARG00000097677 2 1 - 1.000 - - - - - - -
50. EDN3 14 1 - 1.000 - - - - - - - endothelin 3
51. KLF10 1 1 - 1.000 - - - - - - - Kruppel-like factor 10
52. lgals3bpa ENSDARG00000037805 2 1 - 1.000 - - - - - - - lectin, galactoside-binding, soluble, 3 binding protein a [Source:ZFIN;Acc:ZDB-GENE-060331-57]
53. si:dkey-6a5.10 si:dkey-6a5.10 17 1 - 1.000 - - - - - - -
54. zgc:175280 ENSDARG00000099111 71 1 - 1.000 - - - - - - - zgc:175280 [Source:ZFIN;Acc:ZDB-GENE-080219-39]
55. si:dkey-70b24.7 si:dkey-70b24.7 5 1 - 1.000 - - - - - - -
56. si:dkey-169l5.3 si:dkey-169l5.3 239 1 - 1.000 - - - - - - -
57. chrnb1l ENSDARG00000022532, ENSDARG00000113943, ENSDARG00000116196 3 1 - 1.000 - - - - - - - cholinergic receptor, nicotinic, beta 1 (muscle) like [Source:ZFIN;Acc:ZDB-GENE-060811-1]
58. slc43a3a ENSDARG00000059682 27 1 - 1.000 - - - - - - - solute carrier family 43, member 3a [Source:ZFIN;Acc:ZDB-GENE-110208-8]
59. NLRC5 ENSDARG00000024631 11 1 - 1.000 - - - - - - - NLR family, CARD domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-080429-2]
60. FP085391.2 FP085391.2 85 1 - 1.000 - - - - - - -
61. kcnn1a ENSDARG00000091306 95 1 - 1.000 - - - - - - - potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1a [Source:ZFIN;Acc:ZDB-GENE-070912-703]
62. CABZ01112331.1 CABZ01112331.1 9 1 - 1.000 - - - - - - -
63. mst1rb ENSDARG00000004871, ENSDARG00000116535 1 1 - 1.000 - - - - - - - macrophage stimulating 1 receptor b [Source:ZFIN;Acc:ZDB-GENE-071218-3]
64. heyl ENSDARG00000055798, ENSDARG00000112770 76 1 - 1.000 - - - - - - - hes-related family bHLH transcription factor with YRPW motif-like [Source:ZFIN;Acc:ZDB-GENE-030131-7074]
65. lrrn3 lrrn3 137 1 - 1.000 - - - - - - -
66. clcn1a ENSDARG00000062084 120 1 - 1.000 - - - - - - - chloride channel, voltage-sensitive 1a [Source:ZFIN;Acc:ZDB-GENE-060503-333]
67. C2CD4A ENSDARG00000061416 61 1 - 1.000 - - - - - - - C2 calcium dependent domain containing 4A [Source:ZFIN;Acc:ZDB-GENE-030131-5712]
68. eno4 ENSDARG00000070598 78 1 - 1.000 - - - - - - - enolase 4 [Source:ZFIN;Acc:ZDB-GENE-061013-677]
69. FP325123.1_1 ENSDARG00000105359 38 1 - 1.000 - - - - - - - Histone H3.2 [Source:UniProtKB/Swiss-Prot;Acc:Q4QRF4]
70. trim35-27 ENSDARG00000035009 62 1 - 1.000 - - - - - - - tripartite motif containing 35-27 [Source:ZFIN;Acc:ZDB-GENE-030131-6185]
71. EVA1B EVA1B 22 1 - 1.000 - - - - - - -
72. DYNC1H1 ENSDARG00000014717 11 1 - 1.000 - - - - - - - dynein, cytoplasmic 1, heavy chain 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7050]
73. CU693369.1 CU693369.1 2 1 - 1.000 - - - - - - -
74. zgc:173837 ENSDARG00000076949 24 1 - 1.000 - - - - - - - zgc:173837 [Source:ZFIN;Acc:ZDB-GENE-080213-12]
75. CR854963.2 ENSDARG00000114235 82 1 - 1.000 - - - - - - -
76. vax2 ENSDARG00000058702 175 1 - 1.000 - - - - - - - ventral anterior homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-030904-8]
77. U11 U11 11 1 - 1.000 - - - - - - -
78. CU467646.1 ENSDARG00000075090 27 1 - 1.000 - - - - - - - mucin-5AC-like [Source:NCBI gene;Acc:110439410]
79. si:ch73-289h5.1 si:ch73-289h5.1 2 1 - 1.000 - - - - - - -
80. si:dkey-220k22.3 ENSDARG00000094693 166 1 - 1.000 - - - - - - - si:dkey-220k22.3 [Source:ZFIN;Acc:ZDB-GENE-060526-257]
81. slc1a3b ENSDARG00000043148 431 1 - 1.000 - - - - - - - solute carrier family 1 (glial high affinity glutamate transporter), member 3b [Source:ZFIN;Acc:ZDB-GENE-090708-3]
82. mpz ENSDARG00000038609 1740 1 - 1.000 - - - - - - - myelin protein zero [Source:ZFIN;Acc:ZDB-GENE-010724-4]
83. slc18b1 ENSDARG00000044047 7 1 - 1.000 - - - - - - - solute carrier family 18, subfamily B, member 1 [Source:ZFIN;Acc:ZDB-GENE-050417-386]
84. si:dkey-11f14.2 si:dkey-11f14.2 2 1 - 1.000 - - - - - - -
85. gata1b ENSDARG00000059130 151 1 - 1.000 - - - - - - - GATA binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-081104-43]
86. mir30b 4 1 - 1.000 - - - - - - - microRNA 30b
87. si:dkey-113d16.9 si:dkey-113d16.9 345 1 - 1.000 - - - - - - -
88. si:ch211-195i24.1 si:ch211-195i24.1 10 1 - 1.000 - - - - - - -
89. TNFRSF14_1 TNFRSF14_1 165 1 - 1.000 - - - - - - -
90. taok3b ENSDARG00000094052 36 1 - 1.000 - - - - - - - TAO kinase 3b [Source:ZFIN;Acc:ZDB-GENE-060526-59]
91. st8sia1 ENSDARG00000098221 34 1 - 1.000 - - - - - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-051005-1]
92. im:7151068 im:7151068 2 1 - 1.000 - - - - - - -
93. ROCK2_1 ROCK2_1 47 1 - 1.000 - - - - - - -
94. CU694319.1 CU694319.1 72 1 - 1.000 - - - - - - -
95. cspg5b ENSDARG00000099793 67 1 - 1.000 - - - - - - - chondroitin sulfate proteoglycan 5b [Source:ZFIN;Acc:ZDB-GENE-060503-368]
96. C25H12orf29 C25H12orf29 31 1 - 1.000 - - - - - - -
97. ptger4a ENSDARG00000059236 13 1 - 1.000 - - - - - - - prostaglandin E receptor 4 (subtype EP4) a [Source:ZFIN;Acc:ZDB-GENE-060222-1]
98. si:dkeyp-35e5.9 ENSDARG00000103527 24 1 - 1.000 - - - - - - - si:dkeyp-35e5.9 [Source:ZFIN;Acc:ZDB-GENE-110913-107]
99. CR848836.6 CR848836.6 93 1 - 1.000 - - - - - - -
100. snx1b ENSDARG00000103529 4 1 - 1.000 - - - - - - - sorting nexin 1b [Source:ZFIN;Acc:ZDB-GENE-050913-82]

There are 928 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA