Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-4m13.3

Gene Name Gene ID Reads Annotation
si:dkey-4m13.3 6 si:dkey-4m13.3










Genes with expression patterns similar to si:dkey-4m13.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-4m13.3 6 6 1.000 - 1.000 1.000 1.000 - - 1.000 1.000 si:dkey-4m13.3
2. ccdc157 ENSDARG00000056279 31 2 1.000 - - - - - - 1.000 - coiled-coil domain containing 157 [Source:ZFIN;Acc:ZDB-GENE-030616-155]
3. si:dkey-156m18.1 si:dkey-156m18.1 13 1.948 1.000 - - - - - - - 0.948
4. APCDD1 ENSDARG00000098203 10 1.943 1.000 - 0.943 - - - - - - APC down-regulated 1 [Source:HGNC Symbol;Acc:HGNC:15718]
5. shox2 ENSDARG00000075713 104 1.843 1.000 - - 0.843 - - - - - short stature homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1457]
6. crygn2 ENSDARG00000030411 2551 1.843 0.913 - - 0.930 - - - - - crystallin, gamma N2 [Source:ZFIN;Acc:ZDB-GENE-040801-16]
7. si:ch211-120c15.3 ENSDARG00000101807 19 1.82 0.916 - - 0.904 - - - - - si:ch211-120c15.3 [Source:ZFIN;Acc:ZDB-GENE-110913-99]
8. EPHB1 ENSDARG00000076757 20 1.797 1.000 - - - - - - - 0.797 EPH receptor B1 [Source:ZFIN;Acc:ZDB-GENE-070912-219]
9. slco1c1 ENSDARG00000016749 30 1.789 0.838 - - - - - - 0.951 - solute carrier organic anion transporter family, member 1C1 [Source:ZFIN;Acc:ZDB-GENE-041210-50]
10. btbd3a ENSDARG00000005544 595 1.746 1.000 - - 0.746 - - - - - BTB (POZ) domain containing 3a [Source:ZFIN;Acc:ZDB-GENE-090312-7]
11. ftr11 ENSDARG00000038646 6 1.697 - - 0.718 - - - - - 0.979 finTRIM family, member 11 [Source:ZFIN;Acc:ZDB-GENE-070912-195]
12. celf3b ENSDARG00000006983 171 1.693 0.765 - - 0.928 - - - - - cugbp, Elav-like family member 3b [Source:ZFIN;Acc:ZDB-GENE-110408-50]
13. cx28.8 ENSDARG00000071042 62 1.673 - - - - 0.778 - - - 0.895 connexin 28.8 [Source:ZFIN;Acc:ZDB-GENE-050616-1]
14. spo11 ENSDARG00000013837 7 1.667 - - 0.885 0.782 - - - - - SPO11 meiotic protein covalently bound to DSB [Source:ZFIN;Acc:ZDB-GENE-040426-1900]
15. npb ENSDARG00000078828 230 1.599 0.740 - - 0.859 - - - - - neuropeptide B [Source:ZFIN;Acc:ZDB-GENE-040107-40]
16. clock clock 32 1.594 0.701 - 0.893 - - - - - -
17. si:ch211-212n6.18 si:ch211-212n6.18 233 1.582 - - 0.764 0.818 - - - - -
18. PGBD4_4 PGBD4_4 15 1.579 0.871 - - - 0.708 - - - -
19. lrrtm1 ENSDARG00000052713 1041 1.466 0.761 - 0.705 - - - - - - leucine rich repeat transmembrane neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-050506-80]
20. TMCC1_1 TMCC1_1 1 1 - - - 1.000 - - - - -
21. si:dkey-72l14.7 si:dkey-72l14.7 3 1 1.000 - - - - - - - -
22. ciz1a ENSDARG00000089781 20 1 1.000 - - - - - - - - cdkn1a interacting zinc finger protein 1a [Source:ZFIN;Acc:ZDB-GENE-100922-222]
23. si:ch211-14a17.10 ENSDARG00000076534 12 1 - - - - - - - 1.000 - si:ch211-14a17.10 [Source:ZFIN;Acc:ZDB-GENE-030616-581]
24. cdx1a ENSDARG00000114554 28 1 - - - 1.000 - - - - - caudal type homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-050510-1]
25. opn5 ENSDARG00000070110 18 1 1.000 - - - - - - - - opsin 5 [Source:ZFIN;Acc:ZDB-GENE-041001-179]
26. hsf4 ENSDARG00000013251 5 1 - - - - - - - 1.000 - heat shock transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-050306-18]
27. FP017295.1 ENSDARG00000091185 22 1 1.000 - - - - - - - -
28. msxa msxa 263 1 1.000 - - - - - - - -
29. BX119910.3 BX119910.3 7 1 1.000 - - - - - - - -
30. BX470254.1_1 ENSDARG00000097402 50 1 1.000 - - - - - - - -
31. si:ch211-81g2.1 si:ch211-81g2.1 5 1 - - - 1.000 - - - - -
32. si:dkey-51d8.6 ENSDARG00000090769 17 1 1.000 - - - - - - - - si:dkey-51d8.6 [Source:ZFIN;Acc:ZDB-GENE-110914-115]
33. trpm1a ENSDARG00000011259, ENSDARG00000111200, ENSDARG00000112747 48 1 1.000 - - - - - - - - transient receptor potential cation channel, subfamily M, member 1a [Source:ZFIN;Acc:ZDB-GENE-070112-1372]
34. si:ch73-155e10.1 si:ch73-155e10.1 13 1 1.000 - - - - - - - -
35. CABZ01066717.2 CABZ01066717.2 10 1 1.000 - - - - - - - -
36. SLC16A7 ENSDARG00000098258 4 1 1.000 - - - - - - - - solute carrier family 16 member 7 [Source:HGNC Symbol;Acc:HGNC:10928]
37. ptf1a ENSDARG00000014479 349 1 1.000 - - - - - - - - pancreas associated transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030616-579]
38. cyp2aa2 ENSDARG00000104811 77 1 1.000 - - - - - - - - y cytochrome P450, family 2, subfamily AA, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-061027-232]
39. ftr42 4 1 1.000 - - - - - - - - finTRIM family, member 42
40. pcdh2ab7 7 1 1.000 - - - - - - - - protocadherin 2 alpha b 7
41. KLHL35 ENSDARG00000063577 77 1 1.000 - - - - - - - - kelch-like family member 35 [Source:ZFIN;Acc:ZDB-GENE-091118-66]
42. ftr14l ENSDARG00000078254 2 1 1.000 - - - - - - - - finTRIM family, member 14-like [Source:ZFIN;Acc:ZDB-GENE-090312-123]
43. me1 ENSDARG00000053215 107 1 1.000 - - - - - - - - malic enzyme 1, NADP(+)-dependent, cytosolic [Source:ZFIN;Acc:ZDB-GENE-061013-438]
44. tlr4bb ENSDARG00000022048, ENSDARG00000110914 2 1 - - - 1.000 - - - - - toll-like receptor 4b, duplicate b [Source:ZFIN;Acc:ZDB-GENE-040219-9]
45. ebf1b ENSDARG00000069196 64 1 1.000 - - - - - - - - early B cell factor 1b [Source:ZFIN;Acc:ZDB-GENE-090814-2]
46. si:dkey-34e4.1 ENSDARG00000022085 5 1 1.000 - - - - - - - - si:dkey-34e4.1 [Source:ZFIN;Acc:ZDB-GENE-070705-456]
47. si:ch211-171h4.7 ENSDARG00000088408 168 1 1.000 - - - - - - - - si:ch211-171h4.7 [Source:ZFIN;Acc:ZDB-GENE-120215-25]
48. rgs11 ENSDARG00000037646 24 1 1.000 - - - - - - - - regulator of G protein signaling 11 [Source:ZFIN;Acc:ZDB-GENE-080220-46]
49. tecrl2 tecrl2 11 1 1.000 - - - - - - - -
50. scd ENSDARG00000033662 146 1 1.000 - - - - - - - - stearoyl-CoA desaturase (delta-9-desaturase) [Source:ZFIN;Acc:ZDB-GENE-031106-3]
51. CU672227.1 ENSDARG00000105807 15 1 1.000 - - - - - - - -
52. si:dkey-9i23.6 ENSDARG00000094678 58 1 1.000 - - - - - - - - si:dkey-9i23.6 [Source:ZFIN;Acc:ZDB-GENE-090313-365]
53. BX901974.1 ENSDARG00000067592 2 1 - - - 1.000 - - - - -
54. ARFGAP1 ENSDARG00000101616 2952 1 - - - - 1.000 - - - - ADP-ribosylation factor GTPase activating protein 1 [Source:ZFIN;Acc:ZDB-GENE-041114-130]
55. nmrk1 ENSDARG00000037913 18 1 1.000 - - - - - - - - nicotinamide riboside kinase 1 [Source:ZFIN;Acc:ZDB-GENE-050320-8]
56. CABZ01118678.1 ENSDARG00000091359 2 1 1.000 - - - - - - - - calmodulin-regulated spectrin-associated protein 3-like [Source:NCBI gene;Acc:100007608]
57. edil3 edil3 24 1 1.000 - - - - - - - -
58. zgc:110191 zgc:110191 359 1 1.000 - - - - - - - -
59. fbxo43 ENSDARG00000104186 40 1 1.000 - - - - - - - - F-box protein 43 [Source:ZFIN;Acc:ZDB-GENE-040426-1645]
60. CIR1 ENSDARG00000099733 66 1 1.000 - - - - - - - - corepressor interacting with RBPJ, 1 [Source:HGNC Symbol;Acc:HGNC:24217]
61. CRYGM4 ENSDARG00000008219 1 1 - - - 1.000 - - - - - crystallin, gamma M4 [Source:ZFIN;Acc:ZDB-GENE-120312-2]
62. GRM8_1 GRM8_1 85 1 1.000 - - - - - - - -
63. zdhhc23b ENSDARG00000003899, ENSDARG00000116894 31 1 1.000 - - - - - - - - zinc finger, DHHC-type containing 23b [Source:ZFIN;Acc:ZDB-GENE-040808-13]
64. si:ch211-274p24.4 ENSDARG00000087088 36 1 1.000 - - - - - - - - si:ch211-274p24.4 [Source:ZFIN;Acc:ZDB-GENE-091204-337]
65. rgs16 ENSDARG00000040177, ENSDARG00000110238 12 1 - - - - 1.000 - - - - regulator of G protein signaling 16 [Source:ZFIN;Acc:ZDB-GENE-050417-393]
66. setmar ENSDARG00000074836 29 1 1.000 - - - - - - - - SET domain and mariner transposase fusion gene [Source:ZFIN;Acc:ZDB-GENE-080204-61]
67. ARSI_1 ARSI_1 38 1 1.000 - - - - - - - -
68. scn1a_2 1 1 1.000 - - - - - - - - sodium channel, voltage-gated, type I, alpha, transcript variant X1
69. bcl11aa ENSDARG00000061352 61 1 1.000 - - - - - - - - B cell CLL/lymphoma 11Aa [Source:ZFIN;Acc:ZDB-GENE-060421-4643]
70. ADAMTS15_1 ADAMTS15_1 11 1 1.000 - - - - - - - -
71. ppef1 ENSDARG00000020191 1 1 - - - - - - - 1.000 - protein phosphatase, EF-hand calcium binding domain 1 [Source:ZFIN;Acc:ZDB-GENE-080303-27]
72. rfc4 ENSDARG00000042458 2 1 - - - 1.000 - - - - - replication factor C (activator 1) 4 [Source:ZFIN;Acc:ZDB-GENE-040824-3]
73. BX000999.2 BX000999.2 2353 1 1.000 - - - - - - - -
74. si:dkeyp-87e3.3 si:dkeyp-87e3.3 68 1 1.000 - - - - - - - -
75. HIST1H2BA ENSDARG00000116654 10 1 1.000 - - - - - - - - histone cluster 1 H2B family member a [Source:HGNC Symbol;Acc:HGNC:18730]
76. nyx ENSDARG00000061791 2 1 - - - 1.000 - - - - - nyctalopin [Source:ZFIN;Acc:ZDB-GENE-061026-3]
77. c6ast4 ENSDARG00000052578 6 1 1.000 - - - - - - - - six-cysteine containing astacin protease 4 [Source:ZFIN;Acc:ZDB-GENE-050626-100]
78. si:ch211-63o20.7 ENSDARG00000042000 93 1 1.000 - - - - - - - - si:ch211-63o20.7 [Source:ZFIN;Acc:ZDB-GENE-041001-194]
79. cog1 ENSDARG00000105131 35 1 1.000 - - - - - - - - component of oligomeric golgi complex 1 [Source:ZFIN;Acc:ZDB-GENE-050302-128]
80. FHDC1 ENSDARG00000074812 2 1 1.000 - - - - - - - - FH2 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040826-4]
81. GPR22_1 GPR22_1 28 1 1.000 - - - - - - - -
82. si:ch211-15j1.1 ENSDARG00000093177 1 1 1.000 - - - - - - - - si:ch211-15j1.1 [Source:ZFIN;Acc:ZDB-GENE-081031-25]
83. cdcp1a ENSDARG00000058943 70 1 1.000 - - - - - - - - CUB domain containing protein 1a [Source:ZFIN;Acc:ZDB-GENE-050327-55]
84. si:dkey-29p23.3 si:dkey-29p23.3 3 1 1.000 - - - - - - - -
85. CU367845.1_1 CU367845.1_1 43 1 - - - 1.000 - - - - -
86. si:ch211-152l15.4 si:ch211-152l15.4 13 1 1.000 - - - - - - - -
87. CD44 CD44 11 1 1.000 - - - - - - - -
88. gabrb2 ENSDARG00000079586 33 1 1.000 - - - - - - - - gamma-aminobutyric acid (GABA) A receptor, beta 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8196]
89. C18H15orf61 C18H15orf61 104 1 1.000 - - - - - - - -
90. paqr7a ENSDARG00000100462 15 1 1.000 - - - - - - - - progestin and adipoQ receptor family member VII, a [Source:ZFIN;Acc:ZDB-GENE-070705-346]
91. si:dkey-254e13.13 si:dkey-254e13.13 6 1 - - - 1.000 - - - - -
92. si:ch211-132b12.7 ENSDARG00000068374 30 1 1.000 - - - - - - - - si:ch211-132b12.7 [Source:ZFIN;Acc:ZDB-GENE-050419-250]
93. si:dkey-148e22.3 si:dkey-148e22.3 4 1 1.000 - - - - - - - -
94. si:ch211-128b10.5 si:ch211-128b10.5 3 1 - - - 1.000 - - - - -
95. ca15b ENSDARG00000040510 5 1 - - - - - - - 1.000 - carbonic anhydrase XVb [Source:ZFIN;Acc:ZDB-GENE-040426-2222]
96. si:dkey-60a16.4 si:dkey-60a16.4 14 1 1.000 - - - - - - - -
97. si:ch73-103b2.1 ENSDARG00000095944, ENSDARG00000099867 40 1 1.000 - - - - - - - - si:ch73-103b2.1 [Source:ZFIN;Acc:ZDB-GENE-110408-42]
98. si:dkey-247m21.3 ENSDARG00000001906 1 1 1.000 - - - - - - - - si:dkey-247m21.3 [Source:ZFIN;Acc:ZDB-GENE-091204-249]
99. lrrc4bb ENSDARG00000014792 47 1 1.000 - - - - - - - - leucine rich repeat containing 4Bb [Source:ZFIN;Acc:ZDB-GENE-091116-44]
100. SNORA38 SNORA38 574 1 1.000 - - - - - - - -

There are 724 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA