Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:dkey-4m13.3

Gene Name Gene ID Reads Annotation
si:dkey-4m13.3 6 si:dkey-4m13.3










Genes with expression patterns similar to si:dkey-4m13.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-4m13.3 6 6 1.000 - 1.000 1.000 1.000 - - 1.000 1.000 si:dkey-4m13.3
2. ccdc157 ENSDARG00000056279 31 2 1.000 - - - - - - 1.000 - coiled-coil domain containing 157 [Source:ZFIN;Acc:ZDB-GENE-030616-155]
3. si:dkey-156m18.1 si:dkey-156m18.1 13 1.948 1.000 - - - - - - - 0.948
4. APCDD1 ENSDARG00000098203 10 1.943 1.000 - 0.943 - - - - - - APC down-regulated 1 [Source:HGNC Symbol;Acc:HGNC:15718]
5. crygn2 ENSDARG00000030411 2551 1.843 0.913 - - 0.930 - - - - - crystallin, gamma N2 [Source:ZFIN;Acc:ZDB-GENE-040801-16]
6. shox2 ENSDARG00000075713 104 1.843 1.000 - - 0.843 - - - - - short stature homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1457]
7. si:ch211-120c15.3 ENSDARG00000101807 19 1.82 0.916 - - 0.904 - - - - - si:ch211-120c15.3 [Source:ZFIN;Acc:ZDB-GENE-110913-99]
8. EPHB1 ENSDARG00000076757 20 1.797 1.000 - - - - - - - 0.797 EPH receptor B1 [Source:ZFIN;Acc:ZDB-GENE-070912-219]
9. slco1c1 ENSDARG00000016749 30 1.789 0.838 - - - - - - 0.951 - solute carrier organic anion transporter family, member 1C1 [Source:ZFIN;Acc:ZDB-GENE-041210-50]
10. btbd3a ENSDARG00000005544 595 1.746 1.000 - - 0.746 - - - - - BTB (POZ) domain containing 3a [Source:ZFIN;Acc:ZDB-GENE-090312-7]
11. ftr11 ENSDARG00000038646 6 1.697 - - 0.718 - - - - - 0.979 finTRIM family, member 11 [Source:ZFIN;Acc:ZDB-GENE-070912-195]
12. celf3b ENSDARG00000006983 171 1.693 0.765 - - 0.928 - - - - - cugbp, Elav-like family member 3b [Source:ZFIN;Acc:ZDB-GENE-110408-50]
13. cx28.8 ENSDARG00000071042 62 1.673 - - - - 0.778 - - - 0.895 connexin 28.8 [Source:ZFIN;Acc:ZDB-GENE-050616-1]
14. spo11 ENSDARG00000013837 7 1.667 - - 0.885 0.782 - - - - - SPO11 meiotic protein covalently bound to DSB [Source:ZFIN;Acc:ZDB-GENE-040426-1900]
15. npb ENSDARG00000078828 230 1.599 0.740 - - 0.859 - - - - - neuropeptide B [Source:ZFIN;Acc:ZDB-GENE-040107-40]
16. clock clock 32 1.594 0.701 - 0.893 - - - - - -
17. si:ch211-212n6.18 si:ch211-212n6.18 233 1.582 - - 0.764 0.818 - - - - -
18. PGBD4_4 PGBD4_4 15 1.579 0.871 - - - 0.708 - - - -
19. lrrtm1 ENSDARG00000052713 1041 1.466 0.761 - 0.705 - - - - - - leucine rich repeat transmembrane neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-050506-80]
20. CT737190.1 ENSDARG00000091514 1 1 - - - 1.000 - - - - - si:dkey-286h2.5 [Source:NCBI gene;Acc:100536662]
21. si:ch211-276k2.2 4 1 - - - 1.000 - - - - - si:ch211-276k2.2
22. mpp4a ENSDARG00000058222 2 1 - - - - - - - 1.000 - membrane protein, palmitoylated 4a (MAGUK p55 subfamily member 4) [Source:ZFIN;Acc:ZDB-GENE-070912-523]
23. XAF1 ENSDARG00000068939 12 1 - - - - - - - 1.000 - XIAP associated factor 1 [Source:ZFIN;Acc:ZDB-GENE-060929-840]
24. CECR6 25 1 1.000 - - - - - - - - cat eye syndrome chromosome region, candidate 6
25. si:ch211-199i18.8 si:ch211-199i18.8 4 1 - - - - - - - 1.000 -
26. KLHDC8A ENSDARG00000061000 13 1 - - - - - - - 1.000 - kelch domain containing 8A [Source:ZFIN;Acc:ZDB-GENE-120810-3]
27. depdc1b 1 1 1.000 - - - - - - - - DEP domain containing 1B
28. ms4a17a.1 ENSDARG00000043798 7 1 - - - 1.000 - - - - - membrane-spanning 4-domains, subfamily A, member 17A.1 [Source:ZFIN;Acc:ZDB-GENE-050417-307]
29. oprm1 ENSDARG00000039434 22 1 1.000 - - - - - - - - opioid receptor, mu 1 [Source:ZFIN;Acc:ZDB-GENE-010125-1]
30. SERINC4 ENSDARG00000044815 45 1 1.000 - - - - - - - - serine incorporator 4 [Source:ZFIN;Acc:ZDB-GENE-121031-1]
31. PEBP4 ENSDARG00000107065 4 1 - - - - - - - - 1.000 phosphatidylethanolamine binding protein 4 [Source:HGNC Symbol;Acc:HGNC:28319]
32. CABZ01044346.1 CABZ01044346.1 12 1 1.000 - - - - - - - -
33. si:dkey-240n22.6 ENSDARG00000089296, ENSDARG00000106998 3 1 1.000 - - - - - - - - si:dkey-240n22.6 [Source:ZFIN;Acc:ZDB-GENE-070705-411]
34. znf106b ENSDARG00000091947 108 1 1.000 - - - - - - - - zinc finger protein 106b [Source:ZFIN;Acc:ZDB-GENE-091118-24]
35. pak1_1 ENSDARG00000103959 28 1 1.000 - - - - - - - - p21 protein (Cdc42/Rac)-activated kinase 1 [Source:ZFIN;Acc:ZDB-GENE-030826-29]
36. NMUR1 NMUR1 30 1 1.000 - - - - - - - -
37. slc5a2 ENSDARG00000100919 47 1 1.000 - - - - - - - - solute carrier family 5 (sodium/glucose cotransporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2498]
38. itga8 ENSDARG00000078717 215 1 1.000 - - - - - - - - integrin, alpha 8 [Source:ZFIN;Acc:ZDB-GENE-080220-48]
39. map3k8 ENSDARG00000061710 76 1 1.000 - - - - - - - - mitogen-activated protein kinase kinase kinase 8 [Source:ZFIN;Acc:ZDB-GENE-100316-8]
40. c6ast1 ENSDARG00000069216 8 1 1.000 - - - - - - - - six-cysteine containing astacin protease 1 [Source:ZFIN;Acc:ZDB-GENE-070621-1]
41. si:ch1073-296i8.2 ENSDARG00000093773 36 1 1.000 - - - - - - - - si:ch1073-296i8.2 [Source:ZFIN;Acc:ZDB-GENE-110411-9]
42. p2rx3a ENSDARG00000010477, ENSDARG00000115270 6 1 1.000 - - - - - - - - purinergic receptor P2X, ligand-gated ion channel, 3a [Source:ZFIN;Acc:ZDB-GENE-000427-3]
43. rgs8 ENSDARG00000070037, ENSDARG00000111478 37 1 1.000 - - - - - - - - regulator of G protein signaling 8 [Source:ZFIN;Acc:ZDB-GENE-040718-264]
44. gabbr1a ENSDARG00000018967 2 1 - - - - - - - 1.000 - gamma-aminobutyric acid (GABA) B receptor, 1a [Source:ZFIN;Acc:ZDB-GENE-030904-5]
45. CABZ01064968.2 CABZ01064968.2 20 1 1.000 - - - - - - - -
46. CR848784.2 ENSDARG00000111157 16 1 1.000 - - - - - - - -
47. figf 48 1 1.000 - - - - - - - - c-fos induced growth factor, transcript variant X2
48. CR450785.2 ENSDARG00000111875 1 1 1.000 - - - - - - - -
49. si:dkey-178e17.2 1 1 1.000 - - - - - - - - si:dkey-178e17.2, transcript variant X2
50. CABZ01081748.1 ENSDARG00000102139 31 1 1.000 - - - - - - - - gastrula zinc finger protein XlCGF8.2DB-like [Source:NCBI gene;Acc:100007471]
51. appa ENSDARG00000104279 4 1 - - - - - - - 1.000 - amyloid beta (A4) precursor protein a [Source:ZFIN;Acc:ZDB-GENE-000616-13]
52. BEGAIN_1 BEGAIN_1 7 1 - - - - - - - 1.000 -
53. cradd ENSDARG00000028192 153 1 1.000 - - - - - - - - CASP2 and RIPK1 domain containing adaptor with death domain [Source:ZFIN;Acc:ZDB-GENE-041010-168]
54. irbp 2 1 - - - 1.000 - - - - - interphotoreceptor retinoid-binding protein, transcript variant X2
55. fut10 ENSDARG00000100322 22 1 1.000 - - - - - - - - fucosyltransferase 10 [Source:ZFIN;Acc:ZDB-GENE-081022-183]
56. PLCH2 PLCH2 3 1 - - - 1.000 - - - - -
57. si:ch211-210m1.3 si:ch211-210m1.3 2 1 - - - 1.000 - - - - -
58. AL935181.2 AL935181.2 9 1 1.000 - - - - - - - -
59. trmt2b ENSDARG00000033967 127 1 1.000 - - - - - - - - tRNA methyltransferase 2 homolog B [Source:ZFIN;Acc:ZDB-GENE-050809-101]
60. C2CD4C_1 C2CD4C_1 24 1 - - 1.000 - - - - - -
61. pdgfb pdgfb 5 1 - - - - - - - 1.000 -
62. FP085391.2 FP085391.2 85 1 1.000 - - - - - - - -
63. si:dkey-179k24.3 si:dkey-179k24.3 3 1 1.000 - - - - - - - -
64. gna15.3 ENSDARG00000056654, ENSDARG00000092948 9 1 - - - - - - - - 1.000 guanine nucleotide binding protein (G protein), alpha 15 (Gq class), tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-050208-700]
65. gucy2f ENSDARG00000025504 6 1 - - - 1.000 - - - - - guanylate cyclase 2F, retinal [Source:ZFIN;Acc:ZDB-GENE-011128-7]
66. htra1b ENSDARG00000014907 146 1 1.000 - - - - - - - - HtrA serine peptidase 1b [Source:ZFIN;Acc:ZDB-GENE-080219-7]
67. CR318593.1_1 CR318593.1_1 8 1 1.000 - - - - - - - -
68. ptchd4 ENSDARG00000008249 17 1 1.000 - - - - - - - - patched domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-041001-178]
69. MPPED1 ENSDARG00000088181 117 1 1.000 - - - - - - - - metallophosphoesterase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-111104-1]
70. RPS11 ENSDARG00000053058 32 1 1.000 - - - - - - - - ribosomal protein S11 [Source:ZFIN;Acc:ZDB-GENE-040426-2701]
71. si:dkey-217f16.3 si:dkey-217f16.3 1 1 1.000 - - - - - - - -
72. drd2l ENSDARG00000014858 1 1 1.000 - - - - - - - - dopamine receptor D2 like [Source:ZFIN;Acc:ZDB-GENE-030910-1]
73. si:ch73-269m14.3 ENSDARG00000096305 28 1 1.000 - - - - - - - - si:ch73-269m14.3 [Source:ZFIN;Acc:ZDB-GENE-120215-13]
74. si:dkey-208k4.1 si:dkey-208k4.1 15 1 1.000 - - - - - - - -
75. ralgapa1 ENSDARG00000076889 36 1 1.000 - - - - - - - - Ral GTPase activating protein, alpha subunit 1 (catalytic) [Source:ZFIN;Acc:ZDB-GENE-080806-1]
76. tacr3a ENSDARG00000075112 1 1 - - - 1.000 - - - - - tachykinin receptor 3a [Source:ZFIN;Acc:ZDB-GENE-090312-106]
77. treh ENSDARG00000077911 9 1 - - - - - - - 1.000 - trehalase (brush-border membrane glycoprotein) [Source:ZFIN;Acc:ZDB-GENE-070912-84]
78. bckdhb ENSDARG00000014676 17 1 1.000 - - - - - - - - branched chain keto acid dehydrogenase E1, beta polypeptide [Source:ZFIN;Acc:ZDB-GENE-030124-2]
79. CNGB1 CNGB1 40 1 1.000 - - - - - - - -
80. pdzrn3a ENSDARG00000073757 1 1 - - - - - - - 1.000 - PDZ domain containing RING finger 3a [Source:ZFIN;Acc:ZDB-GENE-090313-307]
81. CABZ01070007.1 CABZ01070007.1 5 1 1.000 - - - - - - - -
82. si:dkey-193n17.9 ENSDARG00000094791 2 1 - - - - - - - 1.000 - si:dkey-193n17.9 [Source:ZFIN;Acc:ZDB-GENE-070912-421]
83. si:dkey-122c11.4 si:dkey-122c11.4 13 1 1.000 - - - - - - - -
84. dand5 ENSDARG00000036471 8 1 1.000 - - - - - - - - DAN domain family, member 5 [Source:ZFIN;Acc:ZDB-GENE-040421-2]
85. aqp8a.2 ENSDARG00000071592, ENSDARG00000113224 7 1 - - - 1.000 - - - - - aquaporin 8a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1802]
86. FGFBP3 FGFBP3 993 1 1.000 - - - - - - - -
87. ldlr ldlr 35 1 - - - - 1.000 - - - -
88. rab3da ENSDARG00000018107 28 1 1.000 - - - - - - - - RAB3D, member RAS oncogene family, a [Source:ZFIN;Acc:ZDB-GENE-080722-14]
89. MLLT4 MLLT4 67 1 1.000 - - - - - - - -
90. sult4a1 ENSDARG00000101967 205 1 1.000 - - - - - - - - sulfotransferase family 4A, member 1 [Source:ZFIN;Acc:ZDB-GENE-060421-2705]
91. CU694319.1 CU694319.1 72 1 1.000 - - - - - - - -
92. CR936540.2 CR936540.2 4 1 1.000 - - - - - - - -
93. si:ch211-224l10.5 si:ch211-224l10.5 1 1 - - - 1.000 - - - - -
94. elfn2 elfn2 1 1 1.000 - - - - - - - -
95. cntn5 ENSDARG00000021584 30 1 1.000 - - - - - - - - contactin 5 [Source:ZFIN;Acc:ZDB-GENE-030131-5640]
96. atxn1b ENSDARG00000060862 345 1 1.000 - - - - - - - - ataxin 1b [Source:ZFIN;Acc:ZDB-GENE-061218-2]
97. zgc:110789 ENSDARG00000052497, ENSDARG00000111073 171 1 1.000 - - - - - - - - zgc:110789 [Source:ZFIN;Acc:ZDB-GENE-050306-38]
98. CR318624.1 ENSDARG00000094618 5 1 - - - 1.000 - - - - -
99. ca4b ENSDARG00000042293 5 1 1.000 - - - - - - - - carbonic anhydrase IV b [Source:ZFIN;Acc:ZDB-GENE-080815-5]
100. myl2b ENSDARG00000053424 226 1 1.000 - - - - - - - - myosin, light chain 2b, regulatory, cardiac, slow [Source:ZFIN;Acc:ZDB-GENE-060331-137]

There are 724 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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