Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-4j21.1

Gene Name Gene ID Reads Annotation
si:dkey-4j21.1 17 si:dkey-4j21.1, transcript variant X2










Genes with expression patterns similar to si:dkey-4j21.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-4j21.1 17 8 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 si:dkey-4j21.1, transcript variant X2
2. cnn1b ENSDARG00000102398 40 2.673 1.000 0.883 - - - 0.790 - - - calponin 1, basic, smooth muscle, b [Source:ZFIN;Acc:ZDB-GENE-091118-54]
3. si:ch211-10j20.7 si:ch211-10j20.7 8 2 1.000 1.000 - - - - - - -
4. BX548021.2 BX548021.2 4 2 1.000 1.000 - - - - - - -
5. lppr5b lppr5b 23 2 1.000 1.000 - - - - - - -
6. si:dkey-56m15.4 si:dkey-56m15.4 39 2 1.000 1.000 - - - - - - -
7. AC024175.21 AC024175.21 10 2 - 1.000 - - - 1.000 - - -
8. EPM2AIP1 EPM2AIP1 4 2 - 1.000 - - - - - - 1.000
9. RECK ENSDARG00000090039 15 2 - 1.000 - - - 1.000 - - - reversion-inducing-cysteine-rich protein with kazal motifs [Source:ZFIN;Acc:ZDB-GENE-070117-37]
10. grid2 ENSDARG00000055302, ENSDARG00000110593 1 2 - 1.000 - - - - - - 1.000 glutamate receptor, ionotropic, delta 2 [Source:ZFIN;Acc:ZDB-GENE-040913-1]
11. si:dkey-179k24.6 si:dkey-179k24.6 5 2 1.000 - - - - - - - 1.000
12. scn1a 8 2 - - - - - 1.000 - - 1.000 sodium channel, voltage-gated, type I, alpha, transcript variant X1
13. si:dkey-56i24.1 ENSDARG00000053345, ENSDARG00000078152 11 2 1.000 1.000 - - - - - - - si:dkey-56i24.1 [Source:ZFIN;Acc:ZDB-GENE-081105-8]
14. si:dkey-274m14.3 si:dkey-274m14.3 7 2 1.000 - - - - - - - 1.000
15. si:dkey-188i13.8 ENSDARG00000092725 1 2 - - - - - 1.000 - - 1.000 si:dkey-188i13.8 [Source:ZFIN;Acc:ZDB-GENE-090312-93]
16. slc18a2 ENSDARG00000015110, ENSDARG00000115207 6 2 - - - - - 1.000 - - 1.000 solute carrier family 18 (vesicular monoamine transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-080514-1]
17. C17H8orf74 C17H8orf74 4 2 - - 1.000 - - - - - 1.000
18. CT030048.2 CT030048.2 3 2 - 1.000 - - - - - - 1.000
19. rab14l ENSDARG00000035188 18 2 - 1.000 - - - 1.000 - - - RAB14, member RAS oncogene family, like [Source:ZFIN;Acc:ZDB-GENE-040426-1207]
20. CABZ01053592.1 ENSDARG00000117388 6 2 1.000 - - - - 1.000 - - -
21. ftr76 ENSDARG00000076093 1 2 - 1.000 - - - 1.000 - - - finTRIM family, member 76 [Source:ZFIN;Acc:ZDB-GENE-090508-15]
22. BX321870.1 ENSDARG00000098519 9 2 - - - - - 1.000 - - 1.000
23. CABZ01065506.1 CABZ01065506.1 204 2 1.000 1.000 - - - - - - -
24. PGBD4 ENSDARG00000079328 20 2 1.000 1.000 - - - - - - - piggyBac transposable element derived 4 [Source:ZFIN;Acc:ZDB-GENE-091204-417]
25. si:dkey-93m18.5 si:dkey-93m18.5 2 2 - - - - - 1.000 - - 1.000
26. CABZ01078944.1 CABZ01078944.1 9 1.987 1.000 - - - - - - 0.987 -
27. odf3l2 36 1.981 1.000 - - - - - - 0.981 - outer dense fiber of sperm tails 3-like 2
28. CR339041.2 ENSDARG00000051711 18 1.973 - - 0.991 - - - - 0.982 -
29. ZNF337_9 ZNF337_9 18 1.958 1.000 - 0.958 - - - - - -
30. esr2b ENSDARG00000034181 20 1.942 - - 0.942 - - 1.000 - - - estrogen receptor 2b [Source:ZFIN;Acc:ZDB-GENE-030116-1]
31. si:ch73-57f22.2 ENSDARG00000087453 28 1.918 1.000 - 0.918 - - - - - - si:ch73-57f22.2 [Source:ZFIN;Acc:ZDB-GENE-110411-58]
32. helt ENSDARG00000056400 482 1.896 1.000 0.896 - - - - - - - helt bHLH transcription factor [Source:ZFIN;Acc:ZDB-GENE-040824-6]
33. BTBD17 BTBD17 53 1.896 - 1.000 0.896 - - - - - -
34. si:dkeyp-67e1.8 si:dkeyp-67e1.8 6 1.892 - 1.000 - - 0.892 - - - -
35. PPFIA3 ENSDARG00000077053 310 1.879 0.879 1.000 - - - - - - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3 [Source:ZFIN;Acc:ZDB-GENE-100311-3]
36. TENM2 ENSDARG00000037122 48 1.878 0.878 1.000 - - - - - - - teneurin transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:29943]
37. kctd16a ENSDARG00000004648, ENSDARG00000114292, ENSDARG00000117199 80 1.874 0.874 1.000 - - - - - - - potassium channel tetramerization domain containing 16a [Source:ZFIN;Acc:ZDB-GENE-060117-1]
38. RPS11 ENSDARG00000053058 32 1.867 - 0.900 - - - - - 0.967 - ribosomal protein S11 [Source:ZFIN;Acc:ZDB-GENE-040426-2701]
39. BX530066.1 BX530066.1 42 1.863 0.863 - - - - 1.000 - - -
40. XKR7 ENSDARG00000026333 175 1.856 0.856 1.000 - - - - - - - XK, Kell blood group complex subunit-related family, member 7 [Source:ZFIN;Acc:ZDB-GENE-051113-336]
41. sprn2 ENSDARG00000057665, ENSDARG00000115640 69 1.854 0.854 1.000 - - - - - - - shadow of prion protein 2 [Source:ZFIN;Acc:ZDB-GENE-041221-1]
42. GADD45G GADD45G 382 1.813 0.813 1.000 - - - - - - -
43. zgc:162724 zgc:162724 9 1.802 0.802 - - - - - - - 1.000
44. tmem168b ENSDARG00000062168 17 1.797 - - - - - 1.000 - - 0.797 transmembrane protein 168b [Source:ZFIN;Acc:ZDB-GENE-090406-3]
45. zgc:194665 ENSDARG00000004577 136 1.783 0.783 1.000 - - - - - - - zgc:194665 [Source:ZFIN;Acc:ZDB-GENE-080722-38]
46. CABZ01032469.1 CABZ01032469.1 34 1.778 1.000 - - - - 0.778 - - -
47. gpr22 gpr22 115 1.766 0.766 1.000 - - - - - - -
48. fhl2b ENSDARG00000003991 32 1.764 - 0.883 - - - 0.881 - - - four and a half LIM domains 2b [Source:ZFIN;Acc:ZDB-GENE-041010-121]
49. itln1 ENSDARG00000007534 8 1.755 - - - 0.755 - 1.000 - - - intelectin 1 [Source:ZFIN;Acc:ZDB-GENE-060929-564]
50. scin ENSDARG00000010728, ENSDARG00000111092 437 1.752 0.752 1.000 - - - - - - - scinderin [Source:ZFIN;Acc:ZDB-GENE-060503-6]
51. kcng4 kcng4 37 1.742 1.000 - - - - 0.742 - - -
52. c3c c3c 174 1.742 - 1.000 - - - 0.742 - - -
53. BX682558.1 ENSDARG00000101975 30 1.738 0.738 - - - - 1.000 - - - si: dkey-225f5.4 [Source:NCBI gene;Acc:100000219]
54. si:dkey-11c5.14 si:dkey-11c5.14 15 1.735 - 1.000 0.735 - - - - - -
55. SGSM1_1 SGSM1_1 40 1.735 0.854 - - - - - - 0.881 -
56. CSMD1 CSMD1 15 1.731 1.000 0.731 - - - - - - -
57. FRMPD3 ENSDARG00000074865, ENSDARG00000109705 276 1.73 0.730 1.000 - - - - - - - FERM and PDZ domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-100316-9]
58. FAM185A ENSDARG00000019142 3 1.728 - - - 0.728 - - - - 1.000 family with sequence similarity 185, member A [Source:ZFIN;Acc:ZDB-GENE-131121-241]
59. CU855821.2 CU855821.2 21 1.728 - 1.000 - 0.728 - - - - -
60. si:dkey-114b16.5 si:dkey-114b16.5 5 1.72 - - - - 0.720 1.000 - - -
61. tmeff2b ENSDARG00000058699 82 1.719 - 1.000 0.719 - - - - - - transmembrane protein with EGF-like and two follistatin-like domains 2b [Source:ZFIN;Acc:ZDB-GENE-101001-4]
62. C6H1orf74 C6H1orf74 53 1.71 - - 0.710 - - 1.000 - - -
63. rtn4r ENSDARG00000090035 46 1.709 1.000 0.709 - - - - - - - reticulon 4 receptor [Source:ZFIN;Acc:ZDB-GENE-040310-1]
64. CU302326.3 CU302326.3 6 1.704 - 0.704 - - - 1.000 - - -
65. ptprc ENSDARG00000071437 104 1.704 1.000 0.704 - - - - - - - protein tyrosine phosphatase, receptor type, C [Source:ZFIN;Acc:ZDB-GENE-050208-585]
66. dio3a 19 1.691 0.850 - - - 0.841 - - - - deiodinase, iodothyronine, type IIIa
67. zgc:113162 ENSDARG00000052923 62 1.688 - 0.713 - - - - - 0.975 - zgc:113162 [Source:ZFIN;Acc:ZDB-GENE-050522-530]
68. dbpb ENSDARG00000057652, ENSDARG00000116703 71 1.68 - - - - - 0.742 - 0.938 - D site albumin promoter binding protein b [Source:ZFIN;Acc:ZDB-GENE-100922-6]
69. CABZ01029822.1 ENSDARG00000086931 1654 1.679 0.883 0.796 - - - - - - - uncharacterized LOC100004582 [Source:NCBI gene;Acc:100004582]
70. cnih3 ENSDARG00000014953 25 1.67 0.939 0.731 - - - - - - - cornichon family AMPA receptor auxiliary protein 3 [Source:ZFIN;Acc:ZDB-GENE-041001-180]
71. HIST1H4B HIST1H4B 21 1.648 - - 0.878 - 0.770 - - - -
72. zgc:158291 ENSDARG00000044375, ENSDARG00000111929 621 1.648 0.826 0.822 - - - - - - - zgc:158291 [Source:ZFIN;Acc:ZDB-GENE-061215-70]
73. kcnh7 ENSDARG00000062687 172 1.645 0.905 - 0.740 - - - - - - potassium channel, voltage gated eag related subfamily H, member 7 [Source:ZFIN;Acc:ZDB-GENE-120214-39]
74. xkr8.2 ENSDARG00000076820 51 1.596 0.854 - - - - 0.742 - - - XK, Kell blood group complex subunit-related family, member 8, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-110106-2]
75. si:ch211-190k17.31 si:ch211-190k17.31 29 1.58 - 0.818 - - - 0.762 - - -
76. kcnc4 ENSDARG00000061288, ENSDARG00000113894 95 1.577 0.807 - 0.770 - - - - - - potassium voltage-gated channel, Shaw-related subfamily, member 4 [Source:ZFIN;Acc:ZDB-GENE-060503-773]
77. upf3a ENSDARG00000069297, ENSDARG00000111067 196 1.506 0.752 0.754 - - - - - - - UPF3A, regulator of nonsense mediated mRNA decay [Source:ZFIN;Acc:ZDB-GENE-060721-2]
78. rasl11b ENSDARG00000015611 131 1.504 - 0.746 - - - - - 0.758 - RAS-like, family 11, member B [Source:ZFIN;Acc:ZDB-GENE-040426-793]
79. atp2b3b ENSDARG00000023445 1424 1.503 0.787 0.716 - - - - - - - ATPase plasma membrane Ca2+ transporting 3b [Source:ZFIN;Acc:ZDB-GENE-080409-2]
80. nipbla ENSDARG00000098272 26 1.473 - 0.711 - - - 0.762 - - - nipped-B homolog a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-060526-121]
81. itga3a ENSDARG00000037917 219 1.461 - - 0.709 - - - - 0.752 - integrin, alpha 3a [Source:ZFIN;Acc:ZDB-GENE-090805-3]
82. derl3 ENSDARG00000033871, ENSDARG00000114961 36 1.443 - - - 0.701 - 0.742 - - - derlin 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1324]
83. syngr3b ENSDARG00000025034 290 1.44 0.721 0.719 - - - - - - - synaptogyrin 3b [Source:ZFIN;Acc:ZDB-GENE-070822-6]
84. pgls ENSDARG00000021233 264 1.422 - 0.709 - - - 0.713 - - - 6-phosphogluconolactonase [Source:ZFIN;Acc:ZDB-GENE-040822-9]
85. si:ch211-215m21.29 si:ch211-215m21.29 5 1 - - - - - - - - 1.000
86. rhbdd3 ENSDARG00000079816 2 1 - - - - - - - - 1.000 rhomboid domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070705-39]
87. si:ch73-29c22.1 ENSDARG00000090948 5 1 1.000 - - - - - - - - si:ch73-29c22.1 [Source:ZFIN;Acc:ZDB-GENE-091204-309]
88. 5S_rRNA_13 5S_rRNA_13 0 1 - - - - - - - - 1.000
89. prdm11 ENSDARG00000074468 2 1 1.000 - - - - - - - - PR domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-061221-1]
90. npffr2.1 npffr2.1 60 1 1.000 - - - - - - - -
91. zgc:174697 zgc:174697 128 1 - 1.000 - - - - - - -
92. si:ch211-13k12.1 si:ch211-13k12.1 25 1 - - - - - - - - 1.000
93. tnnc1a ENSDARG00000011400 165 1 - - - - - 1.000 - - - troponin C type 1a (slow) [Source:ZFIN;Acc:ZDB-GENE-030523-1]
94. dharma ENSDARG00000040955 0 1 - 1.000 - - - - - - - dharma [Source:ZFIN;Acc:ZDB-GENE-990415-22]
95. mir301c 84 1 - 1.000 - - - - - - - microRNA 301c
96. si:dkey-49n23.3 ENSDARG00000095325 4 1 1.000 - - - - - - - - si:dkey-49n23.3 [Source:ZFIN;Acc:ZDB-GENE-050208-799]
97. BX323876.2 ENSDARG00000104577 62 1 - - - - - 1.000 - - -
98. CNBD1 ENSDARG00000091489 0 1 - - - - - - - - 1.000 cyclic nucleotide binding domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-130530-1022]
99. KCNB1 ENSDARG00000060095, ENSDARG00000112775 5 1 - - - - - - - - 1.000 potassium voltage-gated channel, Shab-related subfamily, member 1 [Source:ZFIN;Acc:ZDB-GENE-090831-3]
100. MAST1 MAST1 29 1 1.000 - - - - - - - -

There are 1484 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA