Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-4c23.3

Gene Name Gene ID Reads Annotation
si:dkey-4c23.3 ENSDARG00000092028, ENSDARG00000110418 4 si:dkey-4c23.3 [Source:ZFIN;Acc:ZDB-GENE-050208-668]










Genes with expression patterns similar to si:dkey-4c23.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-4c23.3 ENSDARG00000092028, ENSDARG00000110418 4 5 - 1.000 - 1.000 1.000 1.000 - - 1.000 si:dkey-4c23.3 [Source:ZFIN;Acc:ZDB-GENE-050208-668]
2. ST3GAL1 ENSDARG00000079654 2 1.803 - - - - 0.803 - - - 1.000 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-060321-1]
3. si:ch211-259i2.2 si:ch211-259i2.2 45 1.803 - 1.000 - - 0.803 - - - -
4. SLC16A7 ENSDARG00000098258 4 1.803 - - - 1.000 0.803 - - - - solute carrier family 16 member 7 [Source:HGNC Symbol;Acc:HGNC:10928]
5. si:dkey-2j6.2 si:dkey-2j6.2 5 1.78 - - - 1.000 0.780 - - - -
6. prodha ENSDARG00000086746 10 1.762 - 0.959 - - 0.803 - - - - proline dehydrogenase (oxidase) 1a [Source:ZFIN;Acc:ZDB-GENE-041008-73]
7. BX537350.1 BX537350.1 8 1.744 - - - - - 0.744 - - 1.000
8. svopb ENSDARG00000014951 1 1.744 - 1.000 - - - 0.744 - - - SV2 related protein b [Source:ZFIN;Acc:ZDB-GENE-070705-359]
9. snai3 ENSDARG00000031243 31 1.744 - 1.000 - - - 0.744 - - - snail family zinc finger 3 [Source:ZFIN;Acc:ZDB-GENE-061013-757]
10. CABZ01086354.1 CABZ01086354.1 22 1.744 - 1.000 - - - 0.744 - - -
11. ENSDARG00000096199 ENSDARG00000096199 15 1.744 - 1.000 - - - 0.744 - - -
12. stoml3b ENSDARG00000057035 15 1.731 - - - - 0.803 - - - 0.928 stomatin (EPB72)-like 3b [Source:ZFIN;Acc:ZDB-GENE-050417-366]
13. si:dkey-77p23.1 si:dkey-77p23.1 4 1.717 - - - 1.000 0.717 - - - -
14. pabpn1l ENSDARG00000087996, ENSDARG00000113382 40 1.657 - 0.913 - - - 0.744 - - - poly(A) binding protein, nuclear 1-like (cytoplasmic) [Source:ZFIN;Acc:ZDB-GENE-080709-5]
15. gdf9 ENSDARG00000003229 4 1.641 - - - - - 0.744 - - 0.897 growth differentiation factor 9 [Source:ZFIN;Acc:ZDB-GENE-050221-7]
16. si:ch211-154o6.3_1 ENSDARG00000099846, ENSDARG00000112144 10 1.641 - - - - - 0.744 - - 0.897 si:ch211-154o6.3 [Source:ZFIN;Acc:ZDB-GENE-030131-1030]
17. rpgra ENSDARG00000056617 77 1.617 - 0.844 - - - 0.773 - - - retinitis pigmentosa GTPase regulator a [Source:ZFIN;Acc:ZDB-GENE-070912-423]
18. RAB38 122 1.591 - 0.847 - - - 0.744 - - - RAB38, member RAS oncogene family
19. brwd3 ENSDARG00000035540 92 1.585 - 0.841 - - - 0.744 - - - bromodomain and WD repeat domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-100921-43]
20. cers4a ENSDARG00000031387 19 1.582 - - - - - 0.744 - - 0.838 ceramide synthase 4a [Source:ZFIN;Acc:ZDB-GENE-020808-1]
21. HIPK1 HIPK1 8 1.572 - - - - - 0.744 - - 0.828
22. ldhbb ENSDARG00000071076 31 1.547 - 0.803 - - - 0.744 - - - lactate dehydrogenase Bb [Source:ZFIN;Acc:ZDB-GENE-040718-176]
23. si:dkey-58f10.14 ENSDARG00000095026 7 1.497 - - - - 0.753 0.744 - - - si:dkey-58f10.14 [Source:ZFIN;Acc:ZDB-GENE-060526-316]
24. ZNFX1 ENSDARG00000100280 118 1.456 - 0.712 - - - 0.744 - - - zinc finger, NFX1-type containing 1 [Source:ZFIN;Acc:ZDB-GENE-110804-2]
25. si:ch211-122l24.4_1 si:ch211-122l24.4_1 53 1.429 - 0.703 - - - 0.726 - - -
26. CR769782.1 CR769782.1 8 1 - - - 1.000 - - - - -
27. si:dkey-22h13.2 ENSDARG00000112725 3 1 - - - 1.000 - - - - - si:dkey-22h13.2 [Source:ZFIN;Acc:ZDB-GENE-120703-42]
28. or115-1 ENSDARG00000018521 1 1 - - - 1.000 - - - - - odorant receptor, family F, subfamily 115, member 1 [Source:ZFIN;Acc:ZDB-GENE-010309-2]
29. ampd2 ampd2 6 1 - - - 1.000 - - - - -
30. adarb1a ENSDARG00000041609 476 1 - 1.000 - - - - - - - adenosine deaminase, RNA-specific, B1a [Source:ZFIN;Acc:ZDB-GENE-000627-2]
31. si:ch211-235f12.2 ENSDARG00000092119 31 1 - 1.000 - - - - - - - si:ch211-235f12.2 [Source:ZFIN;Acc:ZDB-GENE-050419-113]
32. GRIK1 GRIK1 1 1 - - - 1.000 - - - - -
33. gpr19 ENSDARG00000102226 17 1 - - - 1.000 - - - - - G protein-coupled receptor 19 [Source:ZFIN;Acc:ZDB-GENE-040426-1295]
34. RNH1 ENSDARG00000086631 0 1 - - - 1.000 - - - - - ribonuclease/angiogenin inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4718]
35. ascl1b ENSDARG00000009702, ENSDARG00000101628 1 1 - - - 1.000 - - - - - achaete-scute family bHLH transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-980526-174]
36. tas1r3 ENSDARG00000006341 3 1 - 1.000 - - - - - - - taste receptor, type 1, member 3 [Source:ZFIN;Acc:ZDB-GENE-070917-3]
37. fam167aa ENSDARG00000067665, ENSDARG00000112798 13 1 - 1.000 - - - - - - - family with sequence similarity 167, member Aa [Source:ZFIN;Acc:ZDB-GENE-061013-209]
38. cog6 ENSDARG00000103149 39 1 - - - 1.000 - - - - - component of oligomeric golgi complex 6 [Source:ZFIN;Acc:ZDB-GENE-040426-909]
39. si:dkey-58f10.10 ENSDARG00000094284 4 1 - 1.000 - - - - - - - si:dkey-58f10.10 [Source:ZFIN;Acc:ZDB-GENE-060526-312]
40. HIST2H4B HIST2H4B 9 1 - - - - - - - - 1.000
41. brf2 ENSDARG00000002060 81 1 - 1.000 - - - - - - - BRF2, RNA polymerase III transcription initiation factor [Source:ZFIN;Acc:ZDB-GENE-040801-43]
42. SNORD65_1 SNORD65_1 25 1 - 1.000 - - - - - - -
43. BX572077.3 BX572077.3 20 1 - - - 1.000 - - - - -
44. Metazoa_SRP_25 Metazoa_SRP_25 13 1 - 1.000 - - - - - - -
45. BRSK2_2 BRSK2_2 3 1 - - - 1.000 - - - - -
46. socs7_1 ENSDARG00000077018, ENSDARG00000114903, ENSDARG00000115097 1 1 - - - - - - - - 1.000 suppressor of cytokine signaling 7 [Source:ZFIN;Acc:ZDB-GENE-080204-125]
47. zgc:172120 ENSDARG00000069199 278 1 - 1.000 - - - - - - - zgc:172120 [Source:ZFIN;Acc:ZDB-GENE-080204-46]
48. kcnt1 ENSDARG00000079484 45 1 - 1.000 - - - - - - - potassium channel, subfamily T, member 1 [Source:ZFIN;Acc:ZDB-GENE-091231-1]
49. si:ch211-262n1.5 12 1 - - - 1.000 - - - - - si:ch211-262n1.5
50. nfixb ENSDARG00000061836 7 1 - - - 1.000 - - - - - nuclear factor I/Xb [Source:ZFIN;Acc:ZDB-GENE-060421-5000]
51. AL929192.2 AL929192.2 0 1 - - - 1.000 - - - - -
52. si:dkey-199m13.1 si:dkey-199m13.1 3 1 - - - 1.000 - - - - -
53. ZNF337_11 ZNF337_11 11 1 - - - 1.000 - - - - -
54. 5S_rRNA_10 5S_rRNA_10 2 1 - - - - - - - - 1.000
55. GTF3A GTF3A 6 1 - - - - - - - - 1.000
56. aasdh ENSDARG00000022730 13 1 - 1.000 - - - - - - - aminoadipate-semialdehyde dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-041210-322]
57. fgf12a ENSDARG00000027957 143 1 - 1.000 - - - - - - - fibroblast growth factor 12a [Source:ZFIN;Acc:ZDB-GENE-050221-6]
58. mipol1 ENSDARG00000104845 6 1 - 1.000 - - - - - - - mirror-image polydactyly 1 [Source:ZFIN;Acc:ZDB-GENE-030131-41]
59. mctp1b ENSDARG00000060871 20 1 - 1.000 - - - - - - - multiple C2 domains, transmembrane 1b [Source:ZFIN;Acc:ZDB-GENE-090313-382]
60. si:ch211-191n13.1 si:ch211-191n13.1 1 1 - - - - - - - - 1.000
61. si:ch211-101n13.1 si:ch211-101n13.1 68 1 - 1.000 - - - - - - -
62. FAM163A_1 ENSDARG00000093021 6 1 - 1.000 - - - - - - - family with sequence similarity 163 member A [Source:HGNC Symbol;Acc:HGNC:28274]
63. diaph2 ENSDARG00000076060 26 1 - - - 1.000 - - - - - diaphanous-related formin 2 [Source:ZFIN;Acc:ZDB-GENE-090115-1]
64. si:dkey-148d16.5 ENSDARG00000096782 0 1 - - - 1.000 - - - - - si:dkey-148d16.5 [Source:ZFIN;Acc:ZDB-GENE-130603-77]
65. trim35-23 ENSDARG00000102368, ENSDARG00000113611 1 1 - - - - - - - - 1.000 tripartite motif containing 35-23 [Source:ZFIN;Acc:ZDB-GENE-060503-295]
66. si:dkey-22i16.9 ENSDARG00000095949 16 1 - 1.000 - - - - - - - si:dkey-22i16.9 [Source:ZFIN;Acc:ZDB-GENE-090313-261]
67. CU694952.2 CU694952.2 3 1 - - - 1.000 - - - - -
68. SPOP ENSDARG00000100519 52 1 - 1.000 - - - - - - - speckle-type POZ protein [Source:ZFIN;Acc:ZDB-GENE-040426-1378]
69. IMPG2 IMPG2 1 1 - - - 1.000 - - - - -
70. 5S_rRNA_15 5S_rRNA_15 9 1 - 1.000 - - - - - - -
71. CR854907.1 ENSDARG00000097386 1 1 - - - - - - - - 1.000
72. SH2D4B SH2D4B 4 1 - - - - 1.000 - - - -
73. si:ch211-161m3.4 ENSDARG00000103375 10 1 - 1.000 - - - - - - - si:ch211-161m3.4 [Source:ZFIN;Acc:ZDB-GENE-110914-169]
74. cd74b ENSDARG00000036628 8 1 - - - - - - - - 1.000 CD74 molecule, major histocompatibility complex, class II invariant chain b [Source:ZFIN;Acc:ZDB-GENE-990910-10]
75. BX548011.3 ENSDARG00000113526 2 1 - - - 1.000 - - - - -
76. POLR2E POLR2E 1 1 - - - - - - - - 1.000
77. ppp4r1 ENSDARG00000101316 1 1 - - - 1.000 - - - - - protein phosphatase 4, regulatory subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040426-753]
78. si:ch211-215m21.29 si:ch211-215m21.29 5 1 - 1.000 - - - - - - -
79. KLHDC3 ENSDARG00000102772 14 1 - 1.000 - - - - - - - kelch domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2426]
80. si:dkey-33k1.2 si:dkey-33k1.2 1 1 - - - - - - - - 1.000
81. nrp2a ENSDARG00000096546 2 1 - 1.000 - - - - - - - neuropilin 2a [Source:ZFIN;Acc:ZDB-GENE-040611-2]
82. EXT1_1 EXT1_1 3 1 - - - 1.000 - - - - -
83. si:dkey-3p4.4 si:dkey-3p4.4 2 1 - - - - - - - - 1.000
84. abcc13 ENSDARG00000062519 2 1 - 1.000 - - - - - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 13 [Source:ZFIN;Acc:ZDB-GENE-050517-26]
85. si:dkeyp-4f2.3 ENSDARG00000096011, ENSDARG00000104584 5 1 - 1.000 - - - - - - - si:dkeyp-4f2.3 [Source:ZFIN;Acc:ZDB-GENE-110914-117]
86. itga2b ENSDARG00000018687 0 1 - - - 1.000 - - - - - integrin, alpha 2b [Source:ZFIN;Acc:ZDB-GENE-051031-1]
87. si:dkey-14i17.2 si:dkey-14i17.2 10 1 - - - - - - - - 1.000
88. CMAS CMAS 10 1 - - - - - - - - 1.000
89. cacna1aa ENSDARG00000037905 4 1 - 1.000 - - - - - - - calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, a [Source:ZFIN;Acc:ZDB-GENE-040724-26]
90. slc5a9 ENSDARG00000005518 16 1 - - - - - - - - 1.000 solute carrier family 5 (sodium/sugar cotransporter), member 9 [Source:ZFIN;Acc:ZDB-GENE-080513-3]
91. si:ch211-163f10.4 si:ch211-163f10.4 1 1 - - - - - - - - 1.000
92. si:ch73-91k6.1 18 1 - 1.000 - - - - - - - si:ch73-91k6.1
93. CR848836.4 CR848836.4 4 1 - 1.000 - - - - - - -
94. nfixa ENSDARG00000043226 14 1 - - - 1.000 - - - - - nuclear factor I/Xa [Source:ZFIN;Acc:ZDB-GENE-080722-15]
95. ZCCHC6 2 1 - 1.000 - - - - - - - zinc finger, CCHC domain containing 6
96. si:dkey-270m17.3 si:dkey-270m17.3 1 1 - 1.000 - - - - - - -
97. nts ENSDARG00000057887 5 1 - - - 1.000 - - - - - neurotensin [Source:ZFIN;Acc:ZDB-GENE-091204-433]
98. SLC37A4 SLC37A4 10 1 - 1.000 - - - - - - -
99. GPC5 GPC5 11 1 - 1.000 - - - - - - -
100. PFKL PFKL 9 1 - - - - 1.000 - - - -

There are 764 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA