Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:dkey-4c23.3

Gene Name Gene ID Reads Annotation
si:dkey-4c23.3 ENSDARG00000092028, ENSDARG00000110418 4 si:dkey-4c23.3 [Source:ZFIN;Acc:ZDB-GENE-050208-668]










Genes with expression patterns similar to si:dkey-4c23.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:dkey-4c23.3 ENSDARG00000092028, ENSDARG00000110418 4 5 - 1.000 - 1.000 1.000 1.000 - - 1.000 si:dkey-4c23.3 [Source:ZFIN;Acc:ZDB-GENE-050208-668]
2. si:ch211-259i2.2 si:ch211-259i2.2 45 1.803 - 1.000 - - 0.803 - - - -
3. ST3GAL1 ENSDARG00000079654 2 1.803 - - - - 0.803 - - - 1.000 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-060321-1]
4. SLC16A7 ENSDARG00000098258 4 1.803 - - - 1.000 0.803 - - - - solute carrier family 16 member 7 [Source:HGNC Symbol;Acc:HGNC:10928]
5. si:dkey-2j6.2 si:dkey-2j6.2 5 1.78 - - - 1.000 0.780 - - - -
6. prodha ENSDARG00000086746 10 1.762 - 0.959 - - 0.803 - - - - proline dehydrogenase (oxidase) 1a [Source:ZFIN;Acc:ZDB-GENE-041008-73]
7. BX537350.1 BX537350.1 8 1.744 - - - - - 0.744 - - 1.000
8. snai3 ENSDARG00000031243 31 1.744 - 1.000 - - - 0.744 - - - snail family zinc finger 3 [Source:ZFIN;Acc:ZDB-GENE-061013-757]
9. CABZ01086354.1 CABZ01086354.1 22 1.744 - 1.000 - - - 0.744 - - -
10. ENSDARG00000096199 ENSDARG00000096199 15 1.744 - 1.000 - - - 0.744 - - -
11. svopb ENSDARG00000014951 1 1.744 - 1.000 - - - 0.744 - - - SV2 related protein b [Source:ZFIN;Acc:ZDB-GENE-070705-359]
12. stoml3b ENSDARG00000057035 15 1.731 - - - - 0.803 - - - 0.928 stomatin (EPB72)-like 3b [Source:ZFIN;Acc:ZDB-GENE-050417-366]
13. si:dkey-77p23.1 si:dkey-77p23.1 4 1.717 - - - 1.000 0.717 - - - -
14. pabpn1l ENSDARG00000087996, ENSDARG00000113382 40 1.657 - 0.913 - - - 0.744 - - - poly(A) binding protein, nuclear 1-like (cytoplasmic) [Source:ZFIN;Acc:ZDB-GENE-080709-5]
15. gdf9 ENSDARG00000003229 4 1.641 - - - - - 0.744 - - 0.897 growth differentiation factor 9 [Source:ZFIN;Acc:ZDB-GENE-050221-7]
16. si:ch211-154o6.3_1 ENSDARG00000099846, ENSDARG00000112144 10 1.641 - - - - - 0.744 - - 0.897 si:ch211-154o6.3 [Source:ZFIN;Acc:ZDB-GENE-030131-1030]
17. rpgra ENSDARG00000056617 77 1.617 - 0.844 - - - 0.773 - - - retinitis pigmentosa GTPase regulator a [Source:ZFIN;Acc:ZDB-GENE-070912-423]
18. RAB38 122 1.591 - 0.847 - - - 0.744 - - - RAB38, member RAS oncogene family
19. brwd3 ENSDARG00000035540 92 1.585 - 0.841 - - - 0.744 - - - bromodomain and WD repeat domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-100921-43]
20. cers4a ENSDARG00000031387 19 1.582 - - - - - 0.744 - - 0.838 ceramide synthase 4a [Source:ZFIN;Acc:ZDB-GENE-020808-1]
21. HIPK1 HIPK1 8 1.572 - - - - - 0.744 - - 0.828
22. ldhbb ENSDARG00000071076 31 1.547 - 0.803 - - - 0.744 - - - lactate dehydrogenase Bb [Source:ZFIN;Acc:ZDB-GENE-040718-176]
23. si:dkey-58f10.14 ENSDARG00000095026 7 1.497 - - - - 0.753 0.744 - - - si:dkey-58f10.14 [Source:ZFIN;Acc:ZDB-GENE-060526-316]
24. ZNFX1 ENSDARG00000100280 118 1.456 - 0.712 - - - 0.744 - - - zinc finger, NFX1-type containing 1 [Source:ZFIN;Acc:ZDB-GENE-110804-2]
25. si:ch211-122l24.4_1 si:ch211-122l24.4_1 53 1.429 - 0.703 - - - 0.726 - - -
26. mipol1 ENSDARG00000104845 6 1 - 1.000 - - - - - - - mirror-image polydactyly 1 [Source:ZFIN;Acc:ZDB-GENE-030131-41]
27. si:ch211-128b10.4 si:ch211-128b10.4 3 1 - - - - - - - - 1.000
28. ZCCHC6 2 1 - 1.000 - - - - - - - zinc finger, CCHC domain containing 6
29. abcg2b ENSDARG00000079361, ENSDARG00000110043 11 1 - 1.000 - - - - - - - ATP-binding cassette, sub-family G (WHITE), member 2b [Source:ZFIN;Acc:ZDB-GENE-050517-36]
30. arl11l arl11l 31 1 - - - 1.000 - - - - -
31. si:ch211-117l17.4 ENSDARG00000103534 24 1 - - - - - - - - 1.000 si:ch211-117l17.4 [Source:ZFIN;Acc:ZDB-GENE-110913-102]
32. si:dkeyp-53e4.1 ENSDARG00000094558 22 1 - 1.000 - - - - - - - si:dkeyp-53e4.1 [Source:ZFIN;Acc:ZDB-GENE-110913-59]
33. opn1sw2 ENSDARG00000017274, ENSDARG00000115330 37 1 - 1.000 - - - - - - - opsin 1 (cone pigments), short-wave-sensitive 2 [Source:ZFIN;Acc:ZDB-GENE-990604-40]
34. sorl1 ENSDARG00000013892 13 1 - - - 1.000 - - - - - sortilin-related receptor, L(DLR class) A repeats containing [Source:ZFIN;Acc:ZDB-GENE-050208-22]
35. nprl2 ENSDARG00000059613, ENSDARG00000112631 160 1 - - - 1.000 - - - - - NPR2 like, GATOR1 complex subunit [Source:ZFIN;Acc:ZDB-GENE-060825-93]
36. GRIK1 GRIK1 1 1 - - - 1.000 - - - - -
37. si:ch211-207c6.14 si:ch211-207c6.14 19 1 - - - - - - - - 1.000
38. ttc6 ENSDARG00000104125 7 1 - - - 1.000 - - - - - tetratricopeptide repeat domain 6 [Source:ZFIN;Acc:ZDB-GENE-090429-2]
39. aasdh ENSDARG00000022730 13 1 - 1.000 - - - - - - - aminoadipate-semialdehyde dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-041210-322]
40. ANXA9 ANXA9 74 1 - 1.000 - - - - - - -
41. atf1 ENSDARG00000044301, ENSDARG00000109865 2 1 - - - - - - - - 1.000 activating transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4334]
42. MAMDC4 MAMDC4 3 1 - - - 1.000 - - - - -
43. glis1b ENSDARG00000027933 14 1 - - - 1.000 - - - - - GLIS family zinc finger 1b [Source:ZFIN;Acc:ZDB-GENE-081105-172]
44. chrm2a ENSDARG00000098612 5 1 - - - 1.000 - - - - - cholinergic receptor, muscarinic 2a [Source:ZFIN;Acc:ZDB-GENE-030314-1]
45. ppp2r3a ENSDARG00000077722 7 1 - - - - - - - - 1.000 protein phosphatase 2, regulatory subunit B'', alpha [Source:ZFIN;Acc:ZDB-GENE-070912-646]
46. EP400 ENSDARG00000100965 45 1 - - - 1.000 - - - - - E1A binding protein p400 [Source:ZFIN;Acc:ZDB-GENE-081104-186]
47. zp3b ENSDARG00000039828 15 1 - 1.000 - - - - - - - zona pellucida glycoprotein 3b [Source:ZFIN;Acc:ZDB-GENE-031124-2]
48. tas1r3 ENSDARG00000006341 3 1 - 1.000 - - - - - - - taste receptor, type 1, member 3 [Source:ZFIN;Acc:ZDB-GENE-070917-3]
49. si:dkey-23o4.6 ENSDARG00000034577, ENSDARG00000113997 1 1 - - - 1.000 - - - - - si:dkey-23o4.6 [Source:ZFIN;Acc:ZDB-GENE-100922-3]
50. BRSK2_2 BRSK2_2 3 1 - - - 1.000 - - - - -
51. ENSDARG00000087581 ENSDARG00000087581 2 1 - - - - - - - - 1.000
52. trim35-38 trim35-38 3 1 - 1.000 - - - - - - -
53. spi1b ENSDARG00000000767 88 1 - 1.000 - - - - - - - Spi-1 proto-oncogene b [Source:ZFIN;Acc:ZDB-GENE-980526-164]
54. ryr2b ENSDARG00000003706 6 1 - 1.000 - - - - - - - ryanodine receptor 2b (cardiac) [Source:ZFIN;Acc:ZDB-GENE-061226-3]
55. blnk ENSDARG00000042722 56 1 - 1.000 - - - - - - - B cell linker [Source:ZFIN;Acc:ZDB-GENE-040702-4]
56. si:dkey-58f10.10 ENSDARG00000094284 4 1 - 1.000 - - - - - - - si:dkey-58f10.10 [Source:ZFIN;Acc:ZDB-GENE-060526-312]
57. si:ch211-163f10.4 si:ch211-163f10.4 1 1 - - - - - - - - 1.000
58. si:dkey-22h13.2 ENSDARG00000112725 3 1 - - - 1.000 - - - - - si:dkey-22h13.2 [Source:ZFIN;Acc:ZDB-GENE-120703-42]
59. SNORD65_1 SNORD65_1 25 1 - 1.000 - - - - - - -
60. si:dkey-179k24.2 ENSDARG00000112369 2 1 - - - 1.000 - - - - - si:dkey-179k24.2 [Source:ZFIN;Acc:ZDB-GENE-110914-40]
61. LINS LINS 42 1 - 1.000 - - - - - - -
62. ntrk3a ENSDARG00000077228 12 1 - - - 1.000 - - - - - neurotrophic tyrosine kinase, receptor, type 3a [Source:ZFIN;Acc:ZDB-GENE-010126-3]
63. fgf21 ENSDARG00000100846 19 1 - 1.000 - - - - - - - fibroblast growth factor 21 [Source:ZFIN;Acc:ZDB-GENE-060623-2]
64. CR382327.4 CR382327.4 143 1 - 1.000 - - - - - - -
65. brf2 ENSDARG00000002060 81 1 - 1.000 - - - - - - - BRF2, RNA polymerase III transcription initiation factor [Source:ZFIN;Acc:ZDB-GENE-040801-43]
66. neurod2 ENSDARG00000016854 6 1 - - - 1.000 - - - - - neurogenic differentiation 2 [Source:ZFIN;Acc:ZDB-GENE-010608-3]
67. CUZD1_2 CUZD1_2 1 1 - - - 1.000 - - - - -
68. si:ch211-262n1.5 12 1 - - - 1.000 - - - - - si:ch211-262n1.5
69. ascl1b ENSDARG00000009702, ENSDARG00000101628 1 1 - - - 1.000 - - - - - achaete-scute family bHLH transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-980526-174]
70. CU463316.1 CU463316.1 1 1 - 1.000 - - - - - - -
71. SNORD35_1 SNORD35_1 0 1 - - - 1.000 - - - - -
72. si:ch211-22d5.2 ENSDARG00000079031 3 1 - - - - - - - - 1.000 si:ch211-22d5.2 [Source:ZFIN;Acc:ZDB-GENE-091204-283]
73. lmod2a ENSDARG00000045634, ENSDARG00000112060, ENSDARG00000113325 2 1 - - - - - - - - 1.000 leiomodin 2 (cardiac) a [Source:ZFIN;Acc:ZDB-GENE-040912-41]
74. npffl ENSDARG00000045016 34 1 - 1.000 - - - - - - - neuropeptide FF-amide peptide precursor like [Source:ZFIN;Acc:ZDB-GENE-030806-1]
75. si:dkey-25o1.2 si:dkey-25o1.2 86 1 - - - 1.000 - - - - -
76. usp53b ENSDARG00000076499 16 1 - - - 1.000 - - - - - ubiquitin specific peptidase 53b [Source:ZFIN;Acc:ZDB-GENE-090312-168]
77. zgc:194418 ENSDARG00000111790 1 1 - - - - - - - - 1.000 zgc:194418 [Source:ZFIN;Acc:ZDB-GENE-080723-5]
78. PHF1 ENSDARG00000057439 1 1 - 1.000 - - - - - - - PHD finger protein 1 [Source:ZFIN;Acc:ZDB-GENE-100922-277]
79. dnaaf2 ENSDARG00000103132 24 1 - 1.000 - - - - - - - dynein, axonemal, assembly factor 2 [Source:ZFIN;Acc:ZDB-GENE-050809-128]
80. C1S ENSDARG00000100599 20 1 - 1.000 - - - - - - - complement component 1, s subcomponent [Source:ZFIN;Acc:ZDB-GENE-030131-1232]
81. kcnt1 ENSDARG00000079484 45 1 - 1.000 - - - - - - - potassium channel, subfamily T, member 1 [Source:ZFIN;Acc:ZDB-GENE-091231-1]
82. si:ch73-299h12.1_1 ENSDARG00000102321 8 1 - - - 1.000 - - - - - si:ch73-299h12.1 [Source:ZFIN;Acc:ZDB-GENE-081031-84]
83. ca10b ENSDARG00000009568 8 1 - - - 1.000 - - - - - carbonic anhydrase Xb [Source:ZFIN;Acc:ZDB-GENE-080815-2]
84. si:dkey-199m13.1 si:dkey-199m13.1 3 1 - - - 1.000 - - - - -
85. si:ch211-161m3.4 ENSDARG00000103375 10 1 - 1.000 - - - - - - - si:ch211-161m3.4 [Source:ZFIN;Acc:ZDB-GENE-110914-169]
86. necab1 ENSDARG00000056566, ENSDARG00000111028 26 1 - - - - 1.000 - - - - N-terminal EF-hand calcium binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050417-395]
87. si:dkey-40j3.3 ENSDARG00000103597 5 1 - - - 1.000 - - - - - si:dkey-40j3.3 [Source:ZFIN;Acc:ZDB-GENE-110913-109]
88. ppp4r1 ENSDARG00000101316 1 1 - - - 1.000 - - - - - protein phosphatase 4, regulatory subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040426-753]
89. IGFN1_2 IGFN1_2 3 1 - - - - - - - - 1.000
90. SH2D4B SH2D4B 4 1 - - - - 1.000 - - - -
91. si:dkey-49n23.3 ENSDARG00000095325 4 1 - - - 1.000 - - - - - si:dkey-49n23.3 [Source:ZFIN;Acc:ZDB-GENE-050208-799]
92. pla1a ENSDARG00000102176, ENSDARG00000109274 29 1 - 1.000 - - - - - - - phospholipase A1 member A [Source:ZFIN;Acc:ZDB-GENE-030131-5949]
93. DENND1C DENND1C 1 1 - 1.000 - - - - - - -
94. CR769782.1 CR769782.1 8 1 - - - 1.000 - - - - -
95. fgf12a ENSDARG00000027957 143 1 - 1.000 - - - - - - - fibroblast growth factor 12a [Source:ZFIN;Acc:ZDB-GENE-050221-6]
96. themis ENSDARG00000010619 5 1 - 1.000 - - - - - - - thymocyte selection associated [Source:ZFIN;Acc:ZDB-GENE-041008-160]
97. gpr19 ENSDARG00000102226 17 1 - - - 1.000 - - - - - G protein-coupled receptor 19 [Source:ZFIN;Acc:ZDB-GENE-040426-1295]
98. scarb2 scarb2 0 1 - - - 1.000 - - - - -
99. si:dkey-22i16.9 ENSDARG00000095949 16 1 - 1.000 - - - - - - - si:dkey-22i16.9 [Source:ZFIN;Acc:ZDB-GENE-090313-261]
100. xrra1 ENSDARG00000089578 18 1 - - - 1.000 - - - - - X-ray radiation resistance associated 1 [Source:ZFIN;Acc:ZDB-GENE-101216-2]

There are 764 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA